MS5L2_ARATH
ID MS5L2_ARATH Reviewed; 430 AA.
AC Q9SD20;
DT 29-OCT-2014, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 03-AUG-2022, entry version 137.
DE RecName: Full=Protein POLLENLESS 3-LIKE 2 {ECO:0000303|Ref.5};
GN OrderedLocusNames=At3g51280 {ECO:0000312|Araport:AT3G51280};
GN ORFNames=F24M12.320 {ECO:0000312|EMBL:CAB62650.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP GENE FAMILY, AND NOMENCLATURE.
RX DOI=10.1007/s004970050158;
RA Sanders P.M., Bui A.Q., Weterings K., McIntire K.N., Hsu Y.-C., Lee P.Y.,
RA Truong M.T., Beals T.B., Goldberg R.B.;
RT "Anther developmental defects in Arabidopsis thaliana male-sterile
RT mutants.";
RL Sex. Plant Reprod. 11:297-322(1999).
CC -!- FUNCTION: Probably involved in the regulation of cell division.
CC {ECO:0000250|UniProtKB:Q9SUC3}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:Q9SUC3}.
CC -!- SIMILARITY: Belongs to the MS5 protein family. {ECO:0000305|Ref.5}.
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DR EMBL; AL132980; CAB62650.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE78773.1; -; Genomic_DNA.
DR EMBL; BT006438; AAP21246.1; -; mRNA.
DR EMBL; AK227990; BAE99956.1; -; mRNA.
DR PIR; T45759; T45759.
DR RefSeq; NP_190696.1; NM_114987.6.
DR AlphaFoldDB; Q9SD20; -.
DR SMR; Q9SD20; -.
DR BioGRID; 9609; 2.
DR IntAct; Q9SD20; 1.
DR STRING; 3702.AT3G51280.1; -.
DR PaxDb; Q9SD20; -.
DR PRIDE; Q9SD20; -.
DR ProteomicsDB; 250776; -.
DR EnsemblPlants; AT3G51280.1; AT3G51280.1; AT3G51280.
DR GeneID; 824291; -.
DR Gramene; AT3G51280.1; AT3G51280.1; AT3G51280.
DR KEGG; ath:AT3G51280; -.
DR Araport; AT3G51280; -.
DR TAIR; locus:2080858; AT3G51280.
DR eggNOG; ENOG502QR54; Eukaryota.
DR HOGENOM; CLU_013792_1_0_1; -.
DR InParanoid; Q9SD20; -.
DR OMA; VMNQLHE; -.
DR OrthoDB; 579132at2759; -.
DR PhylomeDB; Q9SD20; -.
DR PRO; PR:Q9SD20; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9SD20; baseline and differential.
DR Genevisible; Q9SD20; AT.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0007049; P:cell cycle; IEA:UniProtKB-KW.
DR GO; GO:0051301; P:cell division; IEA:UniProtKB-KW.
DR Gene3D; 1.25.40.10; -; 1.
DR InterPro; IPR044961; MS5/SDI1.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR36326; PTHR36326; 1.
DR SMART; SM00028; TPR; 1.
DR SUPFAM; SSF48452; SSF48452; 1.
DR PROSITE; PS50005; TPR; 1.
DR PROSITE; PS50293; TPR_REGION; 1.
PE 2: Evidence at transcript level;
KW Cell cycle; Cell division; Coiled coil; Nucleus; Reference proteome;
KW Repeat; TPR repeat.
FT CHAIN 1..430
FT /note="Protein POLLENLESS 3-LIKE 2"
FT /id="PRO_0000430655"
FT REPEAT 40..73
FT /note="TPR 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00339"
FT REPEAT 74..107
FT /note="TPR 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00339"
FT REPEAT 110..143
FT /note="TPR 3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00339"
FT REPEAT 170..203
FT /note="TPR 4"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00339"
FT REPEAT 205..236
FT /note="TPR 5"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00339"
FT REPEAT 238..257
FT /note="TPR 6"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00339"
FT REGION 1..21
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 346..376
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 81..107
FT /evidence="ECO:0000255"
SQ SEQUENCE 430 AA; 47977 MW; C67CAA2271079064 CRC64;
MMRDVFRPTK SAPCSPAKPL GISRTQSESF HAIHKVPVGD SPYVRAKNVQ LVEKDPERAI
PLFWKAINAG DRVDSALKDM AIVMKQQNRA EEAIEAIKSL RVRCSDQAQE SLDNILLDLY
KRCGRLDDQI GLLKHKLFLI QKGLAFNGKR TKTARSQGKK FQVSVEQEAT RLLGNLGWAL
MQRDNFVEAE DAYRRALSIA PDNNKMCNLG ICLMKQGRID EAKETLRRVK PAVVDGPRGV
DSHLKAYERA QQMLNDLGSE MMRRGGDDKV EQRRLFDAIF GSSSIWQPQP CSEQTVKAKP
KPGLSNGDGY GDENVKMSVN PVVVNPLRVD AKPFFSSKLV ISNNEKLKRT RSSSQGMGML
SGIGGDHEGE TNTSTRRRLS MEKKATECGL PDNKDFEDAI MAAVLGTETK VDKKRLKVFQ
DITLCLNQSL
