MSGN1_XENTR
ID MSGN1_XENTR Reviewed; 172 AA.
AC Q28C89;
DT 29-APR-2008, integrated into UniProtKB/Swiss-Prot.
DT 04-APR-2006, sequence version 1.
DT 03-AUG-2022, entry version 91.
DE RecName: Full=Mesogenin-1;
GN Name=msgn1; ORFNames=TGas099h21.1;
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Gastrula;
RG Sanger Xenopus tropicalis EST/cDNA project;
RL Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Involved in specifying the paraxial, but not dorsal,
CC mesoderm. May regulate the expression of T-box transcription factors
CC required for mesoderm formation and differentiation, such as brachyury
CC T, wnt8, vegt and eomes (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00981}.
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DR EMBL; CR942397; CAJ83750.1; -; mRNA.
DR RefSeq; NP_001039104.1; NM_001045639.1.
DR AlphaFoldDB; Q28C89; -.
DR SMR; Q28C89; -.
DR STRING; 8364.ENSXETP00000033971; -.
DR PaxDb; Q28C89; -.
DR Ensembl; ENSXETT00000033971; ENSXETP00000033971; ENSXETG00000015571.
DR GeneID; 733924; -.
DR KEGG; xtr:733924; -.
DR CTD; 343930; -.
DR Xenbase; XB-GENE-972085; msgn1.
DR eggNOG; KOG4029; Eukaryota.
DR HOGENOM; CLU_084234_1_1_1; -.
DR InParanoid; Q28C89; -.
DR OMA; SSWDWKN; -.
DR OrthoDB; 1493381at2759; -.
DR PhylomeDB; Q28C89; -.
DR TreeFam; TF325707; -.
DR Proteomes; UP000008143; Chromosome 5.
DR Proteomes; UP000790000; Unplaced.
DR Bgee; ENSXETG00000015571; Expressed in neurula embryo and 6 other tissues.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.
DR GO; GO:0001707; P:mesoderm formation; IBA:GO_Central.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR Gene3D; 4.10.280.10; -; 1.
DR InterPro; IPR011598; bHLH_dom.
DR InterPro; IPR036638; HLH_DNA-bd_sf.
DR InterPro; IPR040259; Mesogenin/MesP.
DR PANTHER; PTHR20937; PTHR20937; 1.
DR Pfam; PF00010; HLH; 1.
DR SMART; SM00353; HLH; 1.
DR SUPFAM; SSF47459; SSF47459; 1.
DR PROSITE; PS50888; BHLH; 1.
PE 2: Evidence at transcript level;
KW Developmental protein; Differentiation; DNA-binding; Nucleus;
KW Reference proteome; Transcription; Transcription regulation.
FT CHAIN 1..172
FT /note="Mesogenin-1"
FT /id="PRO_0000330031"
FT DOMAIN 108..162
FT /note="bHLH"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00981"
FT REGION 1..69
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..17
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 18..69
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 172 AA; 19621 MW; B7A6258BAF4ADEF5 CRC64;
METLHHPLVK MEDDYALSSD SEPNSSCMAS TWDWKNNDER YSLSQTPSPQ SLSPAVSYES
PYSSSSHTQG LEEMPFSYSL LQYPSLCHGD NGDLTKKDHG HKPSMTVQRR RKASEREKLR
MRAIAEALHT LRNNLPPMYS QGRQPLTKIQ TLKCTINYIS ELTNLLQCSK RV