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MSRAB_HELPY
ID   MSRAB_HELPY             Reviewed;         359 AA.
AC   O25011; O85224;
DT   15-DEC-1998, integrated into UniProtKB/Swiss-Prot.
DT   01-JAN-1998, sequence version 1.
DT   03-AUG-2022, entry version 139.
DE   RecName: Full=Peptide methionine sulfoxide reductase MsrA/MsrB;
DE   Includes:
DE     RecName: Full=Peptide methionine sulfoxide reductase MsrA;
DE              Short=Protein-methionine-S-oxide reductase;
DE              EC=1.8.4.11;
DE     AltName: Full=Peptide-methionine (S)-S-oxide reductase;
DE              Short=Peptide Met(O) reductase;
DE   Includes:
DE     RecName: Full=Peptide methionine sulfoxide reductase MsrB;
DE              EC=1.8.4.12;
DE     AltName: Full=Peptide-methionine (R)-S-oxide reductase;
GN   Name=msrAB; Synonyms=msrA; OrderedLocusNames=HP_0224;
OS   Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori).
OC   Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales;
OC   Helicobacteraceae; Helicobacter.
OX   NCBI_TaxID=85962;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700392 / 26695;
RX   PubMed=9252185; DOI=10.1038/41483;
RA   Tomb J.-F., White O., Kerlavage A.R., Clayton R.A., Sutton G.G.,
RA   Fleischmann R.D., Ketchum K.A., Klenk H.-P., Gill S.R., Dougherty B.A.,
RA   Nelson K.E., Quackenbush J., Zhou L., Kirkness E.F., Peterson S.N.,
RA   Loftus B.J., Richardson D.L., Dodson R.J., Khalak H.G., Glodek A.,
RA   McKenney K., FitzGerald L.M., Lee N., Adams M.D., Hickey E.K., Berg D.E.,
RA   Gocayne J.D., Utterback T.R., Peterson J.D., Kelley J.M., Cotton M.D.,
RA   Weidman J.F., Fujii C., Bowman C., Watthey L., Wallin E., Hayes W.S.,
RA   Borodovsky M., Karp P.D., Smith H.O., Fraser C.M., Venter J.C.;
RT   "The complete genome sequence of the gastric pathogen Helicobacter
RT   pylori.";
RL   Nature 388:539-547(1997).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC   STRAIN=ATCC 49503 / 60190;
RX   PubMed=9596777; DOI=10.1128/iai.66.6.2984-2986.1998;
RA   Cao P., McClain M.S., Forsyth M.H., Cover T.L.;
RT   "Extracellular release of antigenic proteins by Helicobacter pylori.";
RL   Infect. Immun. 66:2984-2986(1998).
CC   -!- FUNCTION: Has an important function as a repair enzyme for proteins
CC       that have been inactivated by oxidation. Catalyzes the reversible
CC       oxidation-reduction of methionine sulfoxide in proteins to methionine
CC       (By similarity). {ECO:0000250}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=[thioredoxin]-disulfide + H2O + L-methionyl-[protein] =
CC         [thioredoxin]-dithiol + L-methionyl-(S)-S-oxide-[protein];
CC         Xref=Rhea:RHEA:14217, Rhea:RHEA-COMP:10698, Rhea:RHEA-COMP:10700,
CC         Rhea:RHEA-COMP:12313, Rhea:RHEA-COMP:12315, ChEBI:CHEBI:15377,
CC         ChEBI:CHEBI:16044, ChEBI:CHEBI:29950, ChEBI:CHEBI:44120,
CC         ChEBI:CHEBI:50058; EC=1.8.4.11;
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=[thioredoxin]-disulfide + H2O + L-methionine = [thioredoxin]-
CC         dithiol + L-methionine (S)-S-oxide; Xref=Rhea:RHEA:19993, Rhea:RHEA-
CC         COMP:10698, Rhea:RHEA-COMP:10700, ChEBI:CHEBI:15377,
CC         ChEBI:CHEBI:29950, ChEBI:CHEBI:50058, ChEBI:CHEBI:57844,
CC         ChEBI:CHEBI:58772; EC=1.8.4.11;
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=[thioredoxin]-disulfide + H2O + L-methionyl-[protein] =
CC         [thioredoxin]-dithiol + L-methionyl-(R)-S-oxide-[protein];
CC         Xref=Rhea:RHEA:24164, Rhea:RHEA-COMP:10698, Rhea:RHEA-COMP:10700,
CC         Rhea:RHEA-COMP:12313, Rhea:RHEA-COMP:12314, ChEBI:CHEBI:15377,
CC         ChEBI:CHEBI:16044, ChEBI:CHEBI:29950, ChEBI:CHEBI:45764,
CC         ChEBI:CHEBI:50058; EC=1.8.4.12;
CC   -!- SIMILARITY: In the N-terminal section; belongs to the MsrA Met
CC       sulfoxide reductase family. {ECO:0000305}.
CC   -!- SIMILARITY: In the C-terminal section; belongs to the MsrB Met
CC       sulfoxide reductase family. {ECO:0000305}.
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DR   EMBL; AE000511; AAD07291.1; -; Genomic_DNA.
DR   EMBL; AF053709; AAC24211.1; -; Genomic_DNA.
DR   PIR; H64547; H64547.
DR   RefSeq; NP_207022.1; NC_000915.1.
DR   RefSeq; WP_000866624.1; NC_018939.1.
DR   PDB; 7E43; X-ray; 2.20 A; A/B=1-359.
DR   PDBsum; 7E43; -.
DR   AlphaFoldDB; O25011; -.
DR   SMR; O25011; -.
DR   DIP; DIP-3282N; -.
DR   IntAct; O25011; 9.
DR   MINT; O25011; -.
DR   STRING; 85962.C694_01130; -.
DR   PaxDb; O25011; -.
DR   EnsemblBacteria; AAD07291; AAD07291; HP_0224.
DR   KEGG; hpy:HP_0224; -.
DR   PATRIC; fig|85962.47.peg.242; -.
DR   eggNOG; COG0225; Bacteria.
DR   eggNOG; COG0229; Bacteria.
DR   OMA; GEFIPYI; -.
DR   PhylomeDB; O25011; -.
DR   Proteomes; UP000000429; Chromosome.
DR   GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR   GO; GO:0033744; F:L-methionine:thioredoxin-disulfide S-oxidoreductase activity; IEA:RHEA.
DR   GO; GO:0033743; F:peptide-methionine (R)-S-oxide reductase activity; IBA:GO_Central.
DR   GO; GO:0008113; F:peptide-methionine (S)-S-oxide reductase activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0030091; P:protein repair; IEA:InterPro.
DR   GO; GO:0006979; P:response to oxidative stress; IEA:InterPro.
DR   Gene3D; 3.30.1060.10; -; 1.
DR   HAMAP; MF_01401; MsrA; 1.
DR   InterPro; IPR002569; Met_Sox_Rdtase_MsrA_dom.
DR   InterPro; IPR036509; Met_Sox_Rdtase_MsrA_sf.
DR   InterPro; IPR028427; Met_Sox_Rdtase_MsrB.
DR   InterPro; IPR002579; Met_Sox_Rdtase_MsrB_dom.
DR   InterPro; IPR011057; Mss4-like_sf.
DR   PANTHER; PTHR10173; PTHR10173; 1.
DR   Pfam; PF01625; PMSR; 1.
DR   Pfam; PF01641; SelR; 1.
DR   SUPFAM; SSF51316; SSF51316; 1.
DR   SUPFAM; SSF55068; SSF55068; 1.
DR   TIGRFAMs; TIGR00401; msrA; 1.
DR   TIGRFAMs; TIGR00357; TIGR00357; 1.
DR   PROSITE; PS51790; MSRB; 1.
PE   1: Evidence at protein level;
KW   3D-structure; Multifunctional enzyme; Oxidoreductase; Reference proteome.
FT   CHAIN           1..359
FT                   /note="Peptide methionine sulfoxide reductase MsrA/MsrB"
FT                   /id="PRO_0000138515"
FT   DOMAIN          206..329
FT                   /note="MsrB"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01126"
FT   REGION          36..189
FT                   /note="Peptide methionine sulfoxide reductase A"
FT   ACT_SITE        44
FT                   /evidence="ECO:0000250"
FT   ACT_SITE        318
FT                   /note="Nucleophile"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01126"
FT   CONFLICT        9
FT                   /note="N -> I (in Ref. 2; AAC24211)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        15
FT                   /note="A -> L (in Ref. 2; AAC24211)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        23
FT                   /note="S -> N (in Ref. 2; AAC24211)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        135
FT                   /note="A -> T (in Ref. 2; AAC24211)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        142
FT                   /note="H -> N (in Ref. 2; AAC24211)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        170
FT                   /note="E -> K (in Ref. 2; AAC24211)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        181
FT                   /note="S -> G (in Ref. 2; AAC24211)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        198
FT                   /note="D -> S (in Ref. 2; AAC24211)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        346
FT                   /note="K -> R (in Ref. 2; AAC24211)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        354
FT                   /note="N -> Q (in Ref. 2; AAC24211)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        358
FT                   /note="S -> T (in Ref. 2; AAC24211)"
FT                   /evidence="ECO:0000305"
FT   STRAND          36..43
FT                   /evidence="ECO:0007829|PDB:7E43"
FT   HELIX           45..53
FT                   /evidence="ECO:0007829|PDB:7E43"
FT   STRAND          58..67
FT                   /evidence="ECO:0007829|PDB:7E43"
FT   STRAND          69..71
FT                   /evidence="ECO:0007829|PDB:7E43"
FT   HELIX           75..77
FT                   /evidence="ECO:0007829|PDB:7E43"
FT   HELIX           78..81
FT                   /evidence="ECO:0007829|PDB:7E43"
FT   STRAND          84..91
FT                   /evidence="ECO:0007829|PDB:7E43"
FT   TURN            93..95
FT                   /evidence="ECO:0007829|PDB:7E43"
FT   HELIX           98..106
FT                   /evidence="ECO:0007829|PDB:7E43"
FT   STRAND          114..117
FT                   /evidence="ECO:0007829|PDB:7E43"
FT   STRAND          120..122
FT                   /evidence="ECO:0007829|PDB:7E43"
FT   HELIX           123..125
FT                   /evidence="ECO:0007829|PDB:7E43"
FT   STRAND          127..133
FT                   /evidence="ECO:0007829|PDB:7E43"
FT   HELIX           136..151
FT                   /evidence="ECO:0007829|PDB:7E43"
FT   STRAND          158..161
FT                   /evidence="ECO:0007829|PDB:7E43"
FT   STRAND          165..167
FT                   /evidence="ECO:0007829|PDB:7E43"
FT   TURN            170..174
FT                   /evidence="ECO:0007829|PDB:7E43"
FT   HELIX           175..178
FT                   /evidence="ECO:0007829|PDB:7E43"
FT   HELIX           188..192
FT                   /evidence="ECO:0007829|PDB:7E43"
FT   HELIX           206..212
FT                   /evidence="ECO:0007829|PDB:7E43"
FT   HELIX           215..223
FT                   /evidence="ECO:0007829|PDB:7E43"
FT   STRAND          231..234
FT                   /evidence="ECO:0007829|PDB:7E43"
FT   STRAND          240..245
FT                   /evidence="ECO:0007829|PDB:7E43"
FT   TURN            246..248
FT                   /evidence="ECO:0007829|PDB:7E43"
FT   STRAND          251..254
FT                   /evidence="ECO:0007829|PDB:7E43"
FT   HELIX           255..257
FT                   /evidence="ECO:0007829|PDB:7E43"
FT   STRAND          262..265
FT                   /evidence="ECO:0007829|PDB:7E43"
FT   STRAND          267..270
FT                   /evidence="ECO:0007829|PDB:7E43"
FT   STRAND          272..282
FT                   /evidence="ECO:0007829|PDB:7E43"
FT   HELIX           284..286
FT                   /evidence="ECO:0007829|PDB:7E43"
FT   STRAND          289..294
FT                   /evidence="ECO:0007829|PDB:7E43"
FT   TURN            295..297
FT                   /evidence="ECO:0007829|PDB:7E43"
FT   STRAND          300..306
FT                   /evidence="ECO:0007829|PDB:7E43"
FT   HELIX           310..312
FT                   /evidence="ECO:0007829|PDB:7E43"
FT   STRAND          316..319
FT                   /evidence="ECO:0007829|PDB:7E43"
FT   HELIX           321..323
FT                   /evidence="ECO:0007829|PDB:7E43"
FT   STRAND          324..328
FT                   /evidence="ECO:0007829|PDB:7E43"
FT   HELIX           329..331
FT                   /evidence="ECO:0007829|PDB:7E43"
FT   TURN            332..336
FT                   /evidence="ECO:0007829|PDB:7E43"
FT   HELIX           338..340
FT                   /evidence="ECO:0007829|PDB:7E43"
FT   HELIX           341..354
FT                   /evidence="ECO:0007829|PDB:7E43"
SQ   SEQUENCE   359 AA;  41275 MW;  D481FAC5C60927B3 CRC64;
     MKVLSYLKNF YLFLAIGAIM QASENMGSQH QKTDERVIYL AGGCFWGLEA YMERIYGVID
     ASSGYANGKT SSTNYEKLHE SDHAESVKVI YDPKKISLDK LLRYYFKVVD PVSVNKQGND
     VGRQYRTGIY YVNSADKEVI DHALKALQKE VKGKIAIEVE PLKNYVRAEE YHQDYLKKHP
     SGYCHIDLKK ADEVIVDDDK YTKPSDEVLK KKLTKLQYEV TQNKHTEKPF ENEYYNKEEE
     GIYVDITTGE PLFSSADKYD SGCGWPSFSK PINKDVVKYE DDESLNRKRI EVLSRIGKAH
     LGHVFNDGPK ELGGLRYCIN SAALRFIPLK DMEKEGYGEF IPYIKKGELK KYINDKKSH
 
 
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