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MSS2_YEAST
ID   MSS2_YEAST              Reviewed;         351 AA.
AC   P40990; D6VRP3;
DT   01-FEB-1995, integrated into UniProtKB/Swiss-Prot.
DT   01-OCT-1996, sequence version 2.
DT   03-AUG-2022, entry version 160.
DE   RecName: Full=Protein MSS2, mitochondrial;
DE   Flags: Precursor;
GN   Name=MSS2; OrderedLocusNames=YDL107W; ORFNames=D2340;
OS   Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC   Saccharomycetales; Saccharomycetaceae; Saccharomyces.
OX   NCBI_TaxID=559292;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC   STRAIN=ATCC 204510 / AB320;
RX   PubMed=7857963; DOI=10.1016/0005-2728(94)00198-e;
RA   Simon M., Seraphin B., Faye G.;
RT   "The nuclear-encoded MSS2 gene is involved in the expression of the
RT   mitochondrial cytochrome-c oxidase subunit 2 (Cox2).";
RL   Biochim. Biophys. Acta 1228:95-98(1995).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC   STRAIN=ATCC 96604 / S288c / FY1679;
RX   PubMed=8896274;
RX   DOI=10.1002/(sici)1097-0061(199609)12:10b<1077::aid-yea8>3.0.co;2-z;
RA   Saiz J.E., Buitrago M.J., Garcia R., Revuelta J.L., del Rey F.;
RT   "The sequence of a 20.3 kb DNA fragment from the left arm of Saccharomyces
RT   cerevisiae chromosome IV contains the KIN28, MSS2, PHO2, POL3 and DUN1
RT   genes, and six new open reading frames.";
RL   Yeast 12:1077-1084(1996).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 204508 / S288c;
RX   PubMed=9169867;
RA   Jacq C., Alt-Moerbe J., Andre B., Arnold W., Bahr A., Ballesta J.P.G.,
RA   Bargues M., Baron L., Becker A., Biteau N., Bloecker H., Blugeon C.,
RA   Boskovic J., Brandt P., Brueckner M., Buitrago M.J., Coster F.,
RA   Delaveau T., del Rey F., Dujon B., Eide L.G., Garcia-Cantalejo J.M.,
RA   Goffeau A., Gomez-Peris A., Granotier C., Hanemann V., Hankeln T.,
RA   Hoheisel J.D., Jaeger W., Jimenez A., Jonniaux J.-L., Kraemer C.,
RA   Kuester H., Laamanen P., Legros Y., Louis E.J., Moeller-Rieker S.,
RA   Monnet A., Moro M., Mueller-Auer S., Nussbaumer B., Paricio N., Paulin L.,
RA   Perea J., Perez-Alonso M., Perez-Ortin J.E., Pohl T.M., Prydz H.,
RA   Purnelle B., Rasmussen S.W., Remacha M.A., Revuelta J.L., Rieger M.,
RA   Salom D., Saluz H.P., Saiz J.E., Saren A.-M., Schaefer M., Scharfe M.,
RA   Schmidt E.R., Schneider C., Scholler P., Schwarz S., Soler-Mira A.,
RA   Urrestarazu L.A., Verhasselt P., Vissers S., Voet M., Volckaert G.,
RA   Wagner G., Wambutt R., Wedler E., Wedler H., Woelfl S., Harris D.E.,
RA   Bowman S., Brown D., Churcher C.M., Connor R., Dedman K., Gentles S.,
RA   Hamlin N., Hunt S., Jones L., McDonald S., Murphy L.D., Niblett D.,
RA   Odell C., Oliver K., Rajandream M.A., Richards C., Shore L., Walsh S.V.,
RA   Barrell B.G., Dietrich F.S., Mulligan J.T., Allen E., Araujo R., Aviles E.,
RA   Berno A., Carpenter J., Chen E., Cherry J.M., Chung E., Duncan M.,
RA   Hunicke-Smith S., Hyman R.W., Komp C., Lashkari D., Lew H., Lin D.,
RA   Mosedale D., Nakahara K., Namath A., Oefner P., Oh C., Petel F.X.,
RA   Roberts D., Schramm S., Schroeder M., Shogren T., Shroff N., Winant A.,
RA   Yelton M.A., Botstein D., Davis R.W., Johnston M., Andrews S., Brinkman R.,
RA   Cooper J., Ding H., Du Z., Favello A., Fulton L., Gattung S., Greco T.,
RA   Hallsworth K., Hawkins J., Hillier L.W., Jier M., Johnson D., Johnston L.,
RA   Kirsten J., Kucaba T., Langston Y., Latreille P., Le T., Mardis E.,
RA   Menezes S., Miller N., Nhan M., Pauley A., Peluso D., Rifkin L., Riles L.,
RA   Taich A., Trevaskis E., Vignati D., Wilcox L., Wohldman P., Vaudin M.,
RA   Wilson R., Waterston R., Albermann K., Hani J., Heumann K., Kleine K.,
RA   Mewes H.-W., Zollner A., Zaccaria P.;
RT   "The nucleotide sequence of Saccharomyces cerevisiae chromosome IV.";
RL   Nature 387:75-78(1997).
RN   [4]
RP   GENOME REANNOTATION.
RC   STRAIN=ATCC 204508 / S288c;
RX   PubMed=24374639; DOI=10.1534/g3.113.008995;
RA   Engel S.R., Dietrich F.S., Fisk D.G., Binkley G., Balakrishnan R.,
RA   Costanzo M.C., Dwight S.S., Hitz B.C., Karra K., Nash R.S., Weng S.,
RA   Wong E.D., Lloyd P., Skrzypek M.S., Miyasato S.R., Simison M., Cherry J.M.;
RT   "The reference genome sequence of Saccharomyces cerevisiae: Then and now.";
RL   G3 (Bethesda) 4:389-398(2014).
RN   [5]
RP   FUNCTION.
RX   PubMed=11604502; DOI=10.1128/mcb.21.22.7663-7672.2001;
RA   Broadley S.A., Demlow C.M., Fox T.D.;
RT   "Peripheral mitochondrial inner membrane protein, Mss2p, required for
RT   export of the mitochondrially coded Cox2p C tail in Saccharomyces
RT   cerevisiae.";
RL   Mol. Cell. Biol. 21:7663-7672(2001).
RN   [6]
RP   INTERACTION WITH COX18.
RX   PubMed=11950926; DOI=10.1091/mbc.01-12-0580;
RA   Saracco S.A., Fox T.D.;
RT   "Cox18p is required for export of the mitochondrially encoded Saccharomyces
RT   cerevisiae Cox2p C-tail and interacts with Pnt1p and Mss2p in the inner
RT   membrane.";
RL   Mol. Biol. Cell 13:1122-1131(2002).
RN   [7]
RP   LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
RX   PubMed=14562106; DOI=10.1038/nature02046;
RA   Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N.,
RA   O'Shea E.K., Weissman J.S.;
RT   "Global analysis of protein expression in yeast.";
RL   Nature 425:737-741(2003).
CC   -!- FUNCTION: Required to stabilize mitochondrial cytochrome C oxidase
CC       subunit 2 (COX2) and to translocate the C-terminal domain of COX2
CC       through the inner membrane. {ECO:0000269|PubMed:11604502}.
CC   -!- SUBUNIT: Interacts with COX18. {ECO:0000269|PubMed:11950926}.
CC   -!- SUBCELLULAR LOCATION: Mitochondrion inner membrane {ECO:0000305}.
CC   -!- MISCELLANEOUS: Present with 736 molecules/cell in log phase SD medium.
CC       {ECO:0000269|PubMed:14562106}.
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DR   EMBL; X81477; CAA57230.1; -; Genomic_DNA.
DR   EMBL; X95644; CAA64905.1; -; Genomic_DNA.
DR   EMBL; Z74155; CAA98674.1; -; Genomic_DNA.
DR   EMBL; BK006938; DAA11753.1; -; Genomic_DNA.
DR   PIR; S67649; S67649.
DR   RefSeq; NP_010176.1; NM_001180166.1.
DR   AlphaFoldDB; P40990; -.
DR   SMR; P40990; -.
DR   BioGRID; 31955; 152.
DR   IntAct; P40990; 1.
DR   STRING; 4932.YDL107W; -.
DR   iPTMnet; P40990; -.
DR   MaxQB; P40990; -.
DR   PaxDb; P40990; -.
DR   PRIDE; P40990; -.
DR   EnsemblFungi; YDL107W_mRNA; YDL107W; YDL107W.
DR   GeneID; 851451; -.
DR   KEGG; sce:YDL107W; -.
DR   SGD; S000002265; MSS2.
DR   VEuPathDB; FungiDB:YDL107W; -.
DR   eggNOG; ENOG502QU4R; Eukaryota.
DR   HOGENOM; CLU_047859_0_0_1; -.
DR   InParanoid; P40990; -.
DR   OMA; WFKLGME; -.
DR   BioCyc; YEAST:G3O-29508-MON; -.
DR   PRO; PR:P40990; -.
DR   Proteomes; UP000002311; Chromosome IV.
DR   RNAct; P40990; protein.
DR   GO; GO:0031314; C:extrinsic component of mitochondrial inner membrane; IDA:SGD.
DR   GO; GO:0005759; C:mitochondrial matrix; IDA:SGD.
DR   GO; GO:0032979; P:protein insertion into mitochondrial inner membrane from matrix; IMP:SGD.
DR   Gene3D; 1.25.40.10; -; 1.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   SUPFAM; SSF48452; SSF48452; 1.
PE   1: Evidence at protein level;
KW   Membrane; Mitochondrion; Mitochondrion inner membrane; Reference proteome;
KW   Repeat; TPR repeat; Transit peptide.
FT   TRANSIT         1..?
FT                   /note="Mitochondrion"
FT                   /evidence="ECO:0000255"
FT   CHAIN           ?..351
FT                   /note="Protein MSS2, mitochondrial"
FT                   /id="PRO_0000021773"
FT   REPEAT          155..188
FT                   /note="TPR 1"
FT   REPEAT          260..294
FT                   /note="TPR 2"
FT   CONFLICT        286..351
FT                   /note="TGMEIMDLECFFGFFDCCVKEENFKGARDCLESVKKLGNDKDKKTMINVFLE
FT                   SRKDSIKLLDKARL -> RVWNMT (in Ref. 1)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   351 AA;  41476 MW;  EA6E9BFC68464C67 CRC64;
     MQRFVSKFVS TPPVPKKFQE IFPKKRTVNK ILFQLDTRLT YHEMYPIFLQ VSQNTNEENI
     PWRKKYPYIR SSDIMQMRNV LITLRTQNKF VHKDLLAMED KLLNIAAELG NNDAISILSF
     NVIHEYKKEN VKSSYEKDIE TANEFIKKLY ARNHHLTVKL IGDLFFENKT YDKAEKYYQE
     FLKLENSTKL AGEVHGKLGE IQIKQVNGFL KAEKSWLSCI ELLEIERSSR WYFLLARLYM
     SSEPMKAKAL LENCASIGFK ECFKTLGFLE LNYFNNYERA KEWFKTGMEI MDLECFFGFF
     DCCVKEENFK GARDCLESVK KLGNDKDKKT MINVFLESRK DSIKLLDKAR L
 
 
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