MT2B_ORYSJ
ID MT2B_ORYSJ Reviewed; 80 AA.
AC Q5JM82; A3A210; O04107;
DT 12-DEC-2006, integrated into UniProtKB/Swiss-Prot.
DT 15-FEB-2005, sequence version 1.
DT 03-AUG-2022, entry version 69.
DE RecName: Full=Metallothionein-like protein 2B;
DE AltName: Full=Class I metallothionein-like protein 2B;
DE AltName: Full=OsMT-I-2b;
DE AltName: Full=OsMT2c;
GN Name=MT2B; Synonyms=RICMT; OrderedLocusNames=Os01g0974200, LOC_Os01g74300;
GN ORFNames=OsJ_04949 {ECO:0000312|EMBL:EAZ15007.1}, P0698H10.31-1;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY, AND INDUCTION.
RX PubMed=9461411; DOI=10.1016/s0378-1119(97)00577-5;
RA Yu L.H., Umeda M., Liu J.-Y., Zhao N.M., Uchimiya H.;
RT "A novel MT gene of rice plants is strongly expressed in the node portion
RT of the stem.";
RL Gene 206:29-35(1998).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RA Uchimiya H.;
RT "Genomic sequence of the rice metallothionein.";
RL Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12447438; DOI=10.1038/nature01184;
RA Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y.,
RA Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H.,
RA Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M.,
RA Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M.,
RA Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T.,
RA Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S.,
RA Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H.,
RA Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y.,
RA Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S.,
RA Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y.,
RA Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S.,
RA Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H.,
RA Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T.;
RT "The genome sequence and structure of rice chromosome 1.";
RL Nature 420:312-316(2002).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [6]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [7]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [8]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [9]
RP GENE FAMILY, AND TISSUE SPECIFICITY.
RX PubMed=17002881; DOI=10.5483/bmbrep.2006.39.5.595;
RA Zhou G., Xu Y., Li J., Yang L., Liu J.-Y.;
RT "Molecular analyses of the metallothionein gene family in rice (Oryza
RT sativa L.).";
RL J. Biochem. Mol. Biol. 39:595-606(2006).
CC -!- FUNCTION: Metallothioneins have a high content of cysteine residues
CC that bind various heavy metals. {ECO:0000305}.
CC -!- TISSUE SPECIFICITY: Highly expressed in stems. Expressed in leaves and
CC rachis. {ECO:0000269|PubMed:17002881, ECO:0000269|PubMed:9461411}.
CC -!- INDUCTION: By heavy metals. {ECO:0000269|PubMed:9461411}.
CC -!- SIMILARITY: Belongs to the metallothionein superfamily. Type 15 family.
CC {ECO:0000305}.
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DR EMBL; AB002820; BAA19661.1; -; mRNA.
DR EMBL; AB041032; BAB40583.1; -; Genomic_DNA.
DR EMBL; AP003298; BAD87425.1; -; Genomic_DNA.
DR EMBL; AP003627; BAD87835.1; -; Genomic_DNA.
DR EMBL; AP008207; BAF07466.1; -; Genomic_DNA.
DR EMBL; AP014957; BAS76451.1; -; Genomic_DNA.
DR EMBL; CM000138; EAZ15007.1; -; Genomic_DNA.
DR EMBL; AK062796; BAG88445.1; -; mRNA.
DR EMBL; AK104075; BAG96398.1; -; mRNA.
DR PIR; T03404; T03404.
DR RefSeq; XP_015619130.1; XM_015763644.1.
DR AlphaFoldDB; Q5JM82; -.
DR STRING; 4530.OS01T0974200-01; -.
DR PaxDb; Q5JM82; -.
DR PRIDE; Q5JM82; -.
DR EnsemblPlants; Os01t0974200-01; Os01t0974200-01; Os01g0974200.
DR EnsemblPlants; Os01t0974200-02; Os01t0974200-02; Os01g0974200.
DR GeneID; 4326409; -.
DR Gramene; Os01t0974200-01; Os01t0974200-01; Os01g0974200.
DR Gramene; Os01t0974200-02; Os01t0974200-02; Os01g0974200.
DR KEGG; osa:4326409; -.
DR HOGENOM; CLU_161105_3_0_1; -.
DR OMA; CKSSHCQ; -.
DR Proteomes; UP000000763; Chromosome 1.
DR Proteomes; UP000007752; Chromosome 1.
DR Proteomes; UP000059680; Chromosome 1.
DR ExpressionAtlas; Q5JM82; baseline and differential.
DR Genevisible; Q5JM82; OS.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR InterPro; IPR000347; Metalthion_15p.
DR PANTHER; PTHR33543; PTHR33543; 1.
DR Pfam; PF01439; Metallothio_2; 1.
PE 2: Evidence at transcript level;
KW Metal-binding; Metal-thiolate cluster; Reference proteome.
FT CHAIN 1..80
FT /note="Metallothionein-like protein 2B"
FT /id="PRO_0000263056"
SQ SEQUENCE 80 AA; 7601 MW; C4C9FBD71B9F8AAA CRC64;
MSCCGGNCGC GSSCQCGNGC GGCKYSEVEP TTTTTFLADA TNKGSGAASG GSEMGAENGS
CGCNTCKCGT SCGCSCCNCN