MTMR_DICDI
ID MTMR_DICDI Reviewed; 1324 AA.
AC Q54GQ1;
DT 02-SEP-2008, integrated into UniProtKB/Swiss-Prot.
DT 19-JAN-2010, sequence version 2.
DT 03-AUG-2022, entry version 68.
DE RecName: Full=Myotubularin-related protein DDB_G0290005;
DE EC=3.1.3.-;
GN ORFNames=DDB_G0290005;
OS Dictyostelium discoideum (Slime mold).
OC Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Dictyosteliales;
OC Dictyosteliaceae; Dictyostelium.
OX NCBI_TaxID=44689;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AX4;
RX PubMed=15875012; DOI=10.1038/nature03481;
RA Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R.,
RA Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B.,
RA Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T.,
RA Lehmann R., Hamlin N., Davies R., Gaudet P., Fey P., Pilcher K., Chen G.,
RA Saunders D., Sodergren E.J., Davis P., Kerhornou A., Nie X., Hall N.,
RA Anjard C., Hemphill L., Bason N., Farbrother P., Desany B., Just E.,
RA Morio T., Rost R., Churcher C.M., Cooper J., Haydock S., van Driessche N.,
RA Cronin A., Goodhead I., Muzny D.M., Mourier T., Pain A., Lu M., Harper D.,
RA Lindsay R., Hauser H., James K.D., Quiles M., Madan Babu M., Saito T.,
RA Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D.,
RA Knights A., Loulseged H., Mungall K.L., Oliver K., Price C., Quail M.A.,
RA Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D., Sanders M.,
RA Ma J., Kohara Y., Sharp S., Simmonds M.N., Spiegler S., Tivey A.,
RA Sugano S., White B., Walker D., Woodward J.R., Winckler T., Tanaka Y.,
RA Shaulsky G., Schleicher M., Weinstock G.M., Rosenthal A., Cox E.C.,
RA Chisholm R.L., Gibbs R.A., Loomis W.F., Platzer M., Kay R.R.,
RA Williams J.G., Dear P.H., Noegel A.A., Barrell B.G., Kuspa A.;
RT "The genome of the social amoeba Dictyostelium discoideum.";
RL Nature 435:43-57(2005).
CC -!- FUNCTION: Phosphatase that acts on lipids with a phosphoinositol
CC headgroup. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the protein-tyrosine phosphatase family. Non-
CC receptor class myotubularin subfamily. {ECO:0000305}.
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DR EMBL; AAFI02000150; EAL62448.2; -; Genomic_DNA.
DR RefSeq; XP_635951.2; XM_630859.2.
DR AlphaFoldDB; Q54GQ1; -.
DR SMR; Q54GQ1; -.
DR STRING; 44689.DDB0266510; -.
DR PaxDb; Q54GQ1; -.
DR EnsemblProtists; EAL62448; EAL62448; DDB_G0290005.
DR GeneID; 8627433; -.
DR KEGG; ddi:DDB_G0290005; -.
DR dictyBase; DDB_G0290005; mtm4.
DR eggNOG; KOG4471; Eukaryota.
DR HOGENOM; CLU_259628_0_0_1; -.
DR InParanoid; Q54GQ1; -.
DR OMA; KFMTRNG; -.
DR Reactome; R-DDI-1483248; Synthesis of PIPs at the ER membrane.
DR Reactome; R-DDI-1632852; Macroautophagy.
DR Reactome; R-DDI-1660499; Synthesis of PIPs at the plasma membrane.
DR Reactome; R-DDI-1660516; Synthesis of PIPs at the early endosome membrane.
DR Reactome; R-DDI-1660517; Synthesis of PIPs at the late endosome membrane.
DR Reactome; R-DDI-8876198; RAB GEFs exchange GTP for GDP on RABs.
DR PRO; PR:Q54GQ1; -.
DR Proteomes; UP000002195; Chromosome 5.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0004438; F:phosphatidylinositol-3-phosphatase activity; IBA:GO_Central.
DR GO; GO:0046856; P:phosphatidylinositol dephosphorylation; IBA:GO_Central.
DR InterPro; IPR010569; Myotubularin-like_Pase_dom.
DR InterPro; IPR030564; Myotubularin_fam.
DR InterPro; IPR029021; Prot-tyrosine_phosphatase-like.
DR InterPro; IPR003595; Tyr_Pase_cat.
DR PANTHER; PTHR10807; PTHR10807; 1.
DR Pfam; PF06602; Myotub-related; 1.
DR SMART; SM00404; PTPc_motif; 1.
DR SUPFAM; SSF52799; SSF52799; 1.
DR PROSITE; PS51339; PPASE_MYOTUBULARIN; 1.
PE 3: Inferred from homology;
KW Coiled coil; Cytoplasm; Hydrolase; Reference proteome.
FT CHAIN 1..1324
FT /note="Myotubularin-related protein DDB_G0290005"
FT /id="PRO_0000346929"
FT DOMAIN 349..807
FT /note="Myotubularin phosphatase"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00669"
FT REGION 140..276
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 624..664
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 841..1043
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1066..1110
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1144..1213
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1232..1296
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 1020..1195
FT /evidence="ECO:0000255"
FT COMPBIAS 141..276
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 864..883
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 898..991
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1004..1043
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1144..1190
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT ACT_SITE 575
FT /note="Phosphocysteine intermediate"
FT /evidence="ECO:0000250"
FT BINDING 514..515
FT /ligand="substrate"
FT /evidence="ECO:0000250"
FT BINDING 575..581
FT /ligand="substrate"
FT /evidence="ECO:0000250"
FT BINDING 621
FT /ligand="substrate"
FT /evidence="ECO:0000250"
SQ SEQUENCE 1324 AA; 149677 MW; EF1703F7C309F8D1 CRC64;
MFSNKNTDNV ENDNNNALGS VIARINSQNI ITKNKAPVIS EDFETQDFDY PSFDDETPNY
DRPQPTMVEN FTLLPGEFVL MITKNVVNLS LTTTTHRIGT LYQTNYQMFF IDDSTRQLVS
TIANGQLLQI KKLKGHVTVK YHDNTTPNNN NNNNNNNNNN NNNTNNNNNN NINKSNNSST
DQLNSFSLEK QPSQNENLNN NNNNNNNNNN GNNNINNNNL MNSLTQPSTS SRSRLLKSNS
TPINLNESST STNSPTLSST TTTTTTTSST NGNCSTNTWY SNGVSEKALI LEIRCKDFMI
TRYCLPFNEK GNEAFELMNK LICNNYQDSN QLFSMSYSPF KGVISPIDGW LFYDPIEEYT
RQGLIGNSNG SDEWRLTKMN SKYELCSTYP QHFIIPFSIS DYLLNKSSSH RNKNRFPVVT
WRHKQTHATL SRSSQQTGKS RCEEDELLIQ AIRKSKTILP NNNNQQQQPQ QQQQTLYIID
IKSTSSSPTS SSSSHCEDIS HYSQCQIESE CLSNIHELRE SQLKLFKVIR NWNEKKGWSE
IQSTGWLDQL SKLLMVTKKI LTHLHLEGFS CLIHCIDGWD RTCQLSSLVQ LCADPYYRTI
KGFIVLISKE WLSFGHKFMT RNGQSISSTS TTTTNSSSNG QLTSSSSNTS ISSNATTTTT
TTTSSKQTSP VFLQFIDVVW QLTKQFPTSF EFSDSFLSVI LHHLNSNLFG TFLYDSEKER
QQNNLPTETQ SLWTLLLSAQ KNSSLLNPLF NQQLSNETSS TTNLTATTSI PLTNSTTLDQ
QLQFKNNNDD GVLFPNPKGV QLWSDYFLKW RNPPKASRKS NTLIAHSLGV SYVNGDLIAF
QKKKRSRRSK DGASGSSSGS SGSSSKHHHH HHHHHHHHHH RKSTDEKDSK EKSSKSSRSR
TSSSSKRKSL STSSNSITQP DIKINETITT TTTTPTNTTT LTNTSTTPRN TTTLTNASTT
PTTTTTTTTT TTPTKDETIN ESVQVNNDKL KSPSGDDIKQ EQDEMNQFTS QHPNNQMESS
SEINQQNEQS QLEQQQEQQQ QQEQQLQHEQ QQIEQQQLQK QQQQQEQQEQ QELEQQEQPN
ETITYSMESD SQSSISQNQN QLQQQQQQQT LLDPIDESSL LATTTTTTSS TAITSASKLE
KELRKQEKEK RKLEKEKKQK ERAERKLEKE KKRDQKEREQ KEKELLEQQK PKADITVVLQ
SPSKKKAMSL TMPVRGTKSR ISIFSSPLVP TLHPNLSDQN SQTNSSGDNS GNVNNSPNLT
STPISNLSNN NNNNNNSNEN SNNNNNNNNN NNDNTSFSKR IFKTLRGTKT FNREPTPTVG
TALN