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MTND_RAT
ID   MTND_RAT                Reviewed;         179 AA.
AC   Q562C9; Q6V9S4;
DT   11-OCT-2005, integrated into UniProtKB/Swiss-Prot.
DT   10-MAY-2005, sequence version 1.
DT   03-AUG-2022, entry version 121.
DE   RecName: Full=Acireductone dioxygenase {ECO:0000255|HAMAP-Rule:MF_03154};
DE   AltName: Full=Acireductone dioxygenase (Fe(2+)-requiring) {ECO:0000255|HAMAP-Rule:MF_03154};
DE            Short=ARD' {ECO:0000255|HAMAP-Rule:MF_03154};
DE            Short=Fe-ARD {ECO:0000255|HAMAP-Rule:MF_03154};
DE            EC=1.13.11.54 {ECO:0000255|HAMAP-Rule:MF_03154};
DE   AltName: Full=Acireductone dioxygenase (Ni(2+)-requiring) {ECO:0000255|HAMAP-Rule:MF_03154};
DE            Short=ARD {ECO:0000255|HAMAP-Rule:MF_03154};
DE            Short=Ni-ARD {ECO:0000255|HAMAP-Rule:MF_03154};
DE            EC=1.13.11.53 {ECO:0000255|HAMAP-Rule:MF_03154};
DE   AltName: Full=Androgen-responsive ARD-like protein 1 {ECO:0000303|PubMed:14684610};
DE   AltName: Full=Membrane-type 1 matrix metalloproteinase cytoplasmic tail-binding protein 1 {ECO:0000255|HAMAP-Rule:MF_03154};
DE            Short=MTCBP-1 {ECO:0000255|HAMAP-Rule:MF_03154};
GN   Name=Adi1; Synonyms=Alp1, Mtcbp1;
OS   Rattus norvegicus (Rat).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC   Murinae; Rattus.
OX   NCBI_TaxID=10116;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA], INDUCTION, SUBCELLULAR LOCATION, AND TISSUE
RP   SPECIFICITY.
RC   STRAIN=Sprague-Dawley; TISSUE=Prostate;
RX   PubMed=14684610; DOI=10.1210/en.2003-0947;
RA   Oram S., Jiang F., Cai X., Haleem R., Dincer Z., Wang Z.;
RT   "Identification and characterization of an androgen-responsive gene
RT   encoding an aci-reductone dioxygenase-like protein in the rat prostate.";
RL   Endocrinology 145:1933-1942(2004).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   TISSUE=Liver;
RX   PubMed=15489334; DOI=10.1101/gr.2596504;
RG   The MGC Project Team;
RT   "The status, quality, and expansion of the NIH full-length cDNA project:
RT   the Mammalian Gene Collection (MGC).";
RL   Genome Res. 14:2121-2127(2004).
CC   -!- FUNCTION: Catalyzes 2 different reactions between oxygen and the
CC       acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene)
CC       depending upon the metal bound in the active site. Fe-containing
CC       acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4-
CC       methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine
CC       in the methionine recycle pathway. Ni-containing acireductone
CC       dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and
CC       formate, and does not lie on the methionine recycle pathway. Also down-
CC       regulates cell migration mediated by MMP14. {ECO:0000255|HAMAP-
CC       Rule:MF_03154}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one + O2 = 4-
CC         methylsulfanyl-2-oxobutanoate + formate + 2 H(+);
CC         Xref=Rhea:RHEA:24504, ChEBI:CHEBI:15378, ChEBI:CHEBI:15379,
CC         ChEBI:CHEBI:15740, ChEBI:CHEBI:16723, ChEBI:CHEBI:49252;
CC         EC=1.13.11.54; Evidence={ECO:0000255|HAMAP-Rule:MF_03154};
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one + O2 = 3-
CC         (methylsulfanyl)propanoate + CO + formate + 2 H(+);
CC         Xref=Rhea:RHEA:14161, ChEBI:CHEBI:15378, ChEBI:CHEBI:15379,
CC         ChEBI:CHEBI:15740, ChEBI:CHEBI:17245, ChEBI:CHEBI:49016,
CC         ChEBI:CHEBI:49252; EC=1.13.11.53; Evidence={ECO:0000255|HAMAP-
CC         Rule:MF_03154};
CC   -!- COFACTOR:
CC       Name=Fe(2+); Xref=ChEBI:CHEBI:29033;
CC         Evidence={ECO:0000255|HAMAP-Rule:MF_03154};
CC       Name=Ni(2+); Xref=ChEBI:CHEBI:49786;
CC         Evidence={ECO:0000255|HAMAP-Rule:MF_03154};
CC       Note=Binds either 1 Fe or Ni cation per monomer. Iron-binding promotes
CC       an acireductone dioxygenase reaction producing 2-keto-4-
CC       methylthiobutyrate, while nickel-binding promotes an acireductone
CC       dioxygenase reaction producing 3-(methylsulfanyl)propanoate.
CC       {ECO:0000255|HAMAP-Rule:MF_03154};
CC   -!- PATHWAY: Amino-acid biosynthesis; L-methionine biosynthesis via salvage
CC       pathway; L-methionine from S-methyl-5-thio-alpha-D-ribose 1-phosphate:
CC       step 5/6. {ECO:0000255|HAMAP-Rule:MF_03154}.
CC   -!- SUBUNIT: Monomer. Interacts with MMP14. {ECO:0000255|HAMAP-
CC       Rule:MF_03154}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_03154}.
CC       Nucleus {ECO:0000255|HAMAP-Rule:MF_03154, ECO:0000269|PubMed:14684610}.
CC       Cell membrane {ECO:0000255|HAMAP-Rule:MF_03154,
CC       ECO:0000269|PubMed:14684610}; Peripheral membrane protein
CC       {ECO:0000255|HAMAP-Rule:MF_03154, ECO:0000269|PubMed:14684610};
CC       Cytoplasmic side {ECO:0000255|HAMAP-Rule:MF_03154,
CC       ECO:0000269|PubMed:14684610}. Note=Localizes to the plasma membrane
CC       when complexed to MMP14. {ECO:0000255|HAMAP-Rule:MF_03154}.
CC   -!- TISSUE SPECIFICITY: Detected in prostate, liver, heart, brain, muscle,
CC       kidney and seminal vesicles. {ECO:0000269|PubMed:14684610}.
CC   -!- INDUCTION: Up-regulated by androgens in the prostate, but not in the
CC       other tissues tested. {ECO:0000269|PubMed:14684610}.
CC   -!- SIMILARITY: Belongs to the acireductone dioxygenase (ARD) family.
CC       {ECO:0000255|HAMAP-Rule:MF_03154}.
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DR   EMBL; AY346335; AAQ24524.1; -; mRNA.
DR   EMBL; BC092562; AAH92562.1; -; mRNA.
DR   RefSeq; NP_954528.1; NM_199097.1.
DR   AlphaFoldDB; Q562C9; -.
DR   SMR; Q562C9; -.
DR   STRING; 10116.ENSRNOP00000011952; -.
DR   jPOST; Q562C9; -.
DR   PaxDb; Q562C9; -.
DR   PRIDE; Q562C9; -.
DR   Ensembl; ENSRNOT00000011951; ENSRNOP00000011952; ENSRNOG00000008950.
DR   GeneID; 298934; -.
DR   KEGG; rno:298934; -.
DR   CTD; 55256; -.
DR   RGD; 727828; Adi1.
DR   eggNOG; KOG2107; Eukaryota.
DR   GeneTree; ENSGT00390000008195; -.
DR   HOGENOM; CLU_090154_0_1_1; -.
DR   InParanoid; Q562C9; -.
DR   OMA; RGQEDEW; -.
DR   OrthoDB; 1166094at2759; -.
DR   PhylomeDB; Q562C9; -.
DR   TreeFam; TF300231; -.
DR   Reactome; R-RNO-1237112; Methionine salvage pathway.
DR   UniPathway; UPA00904; UER00878.
DR   PRO; PR:Q562C9; -.
DR   Proteomes; UP000002494; Chromosome 6.
DR   Bgee; ENSRNOG00000008950; Expressed in liver and 20 other tissues.
DR   Genevisible; Q562C9; RN.
DR   GO; GO:0005737; C:cytoplasm; ISS:UniProtKB.
DR   GO; GO:0005634; C:nucleus; ISS:UniProtKB.
DR   GO; GO:0005886; C:plasma membrane; ISS:UniProtKB.
DR   GO; GO:0010308; F:acireductone dioxygenase (Ni2+-requiring) activity; IEA:RHEA.
DR   GO; GO:0010309; F:acireductone dioxygenase [iron(II)-requiring] activity; IBA:GO_Central.
DR   GO; GO:0005506; F:iron ion binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0016491; F:oxidoreductase activity; ISS:UniProtKB.
DR   GO; GO:0019509; P:L-methionine salvage from methylthioadenosine; ISS:UniProtKB.
DR   GO; GO:0006555; P:methionine metabolic process; IBA:GO_Central.
DR   CDD; cd02232; cupin_ARD; 1.
DR   Gene3D; 2.60.120.10; -; 1.
DR   HAMAP; MF_03154; Salvage_MtnD_euk; 1.
DR   InterPro; IPR004313; ARD.
DR   InterPro; IPR027496; ARD_euk.
DR   InterPro; IPR014710; RmlC-like_jellyroll.
DR   InterPro; IPR011051; RmlC_Cupin_sf.
DR   PANTHER; PTHR23418; PTHR23418; 1.
DR   Pfam; PF03079; ARD; 1.
DR   SUPFAM; SSF51182; SSF51182; 1.
PE   2: Evidence at transcript level;
KW   Amino-acid biosynthesis; Cell membrane; Cytoplasm; Dioxygenase; Iron;
KW   Membrane; Metal-binding; Methionine biosynthesis; Nickel; Nucleus;
KW   Oxidoreductase; Reference proteome.
FT   CHAIN           1..179
FT                   /note="Acireductone dioxygenase"
FT                   /id="PRO_0000162944"
FT   REGION          1..23
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   BINDING         88
FT                   /ligand="Fe(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29033"
FT                   /ligand_note="for iron-dependent acireductone dioxygenase
FT                   activity"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_03154"
FT   BINDING         88
FT                   /ligand="Ni(2+)"
FT                   /ligand_id="ChEBI:CHEBI:49786"
FT                   /ligand_note="for nickel-dependent acireductone dioxygenase
FT                   activity"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_03154"
FT   BINDING         90
FT                   /ligand="Fe(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29033"
FT                   /ligand_note="for iron-dependent acireductone dioxygenase
FT                   activity"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_03154"
FT   BINDING         90
FT                   /ligand="Ni(2+)"
FT                   /ligand_id="ChEBI:CHEBI:49786"
FT                   /ligand_note="for nickel-dependent acireductone dioxygenase
FT                   activity"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_03154"
FT   BINDING         94
FT                   /ligand="Fe(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29033"
FT                   /ligand_note="for iron-dependent acireductone dioxygenase
FT                   activity"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_03154"
FT   BINDING         94
FT                   /ligand="Ni(2+)"
FT                   /ligand_id="ChEBI:CHEBI:49786"
FT                   /ligand_note="for nickel-dependent acireductone dioxygenase
FT                   activity"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_03154"
FT   BINDING         133
FT                   /ligand="Fe(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29033"
FT                   /ligand_note="for iron-dependent acireductone dioxygenase
FT                   activity"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_03154"
FT   BINDING         133
FT                   /ligand="Ni(2+)"
FT                   /ligand_id="ChEBI:CHEBI:49786"
FT                   /ligand_note="for nickel-dependent acireductone dioxygenase
FT                   activity"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_03154"
FT   CONFLICT        161
FT                   /note="P -> A (in Ref. 1; AAQ24524)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   179 AA;  21461 MW;  160E7A28A263A21A CRC64;
     MVQAWYMDES TADPRMPHRA QPDRPVGLEQ LRTLGVLYWK LDADKYENDP ELEQIRKTRN
     YSWMDIITIC KDSLPNYEEK IKMFFEEHLH LDEEIRYILE GSGYFDVRDK EDKWIRISME
     KGDMITLPAG IYHRFTLDEK NYVKAMRLFV GEPVWTPYNR PADHFDARVQ YVKFLEGTA
 
 
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