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MTRA_MYCS2
ID   MTRA_MYCS2              Reviewed;         228 AA.
AC   A0QTK2; I7FYZ5;
DT   06-FEB-2013, integrated into UniProtKB/Swiss-Prot.
DT   09-JAN-2007, sequence version 1.
DT   25-MAY-2022, entry version 95.
DE   RecName: Full=DNA-binding response regulator MtrA;
GN   Name=mtrA; OrderedLocusNames=MSMEG_1874, MSMEI_1835;
OS   Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium
OS   smegmatis).
OC   Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
OC   Mycolicibacterium.
OX   NCBI_TaxID=246196;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700084 / mc(2)155;
RA   Fleischmann R.D., Dodson R.J., Haft D.H., Merkel J.S., Nelson W.C.,
RA   Fraser C.M.;
RL   Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700084 / mc(2)155;
RX   PubMed=17295914; DOI=10.1186/gb-2007-8-2-r20;
RA   Deshayes C., Perrodou E., Gallien S., Euphrasie D., Schaeffer C.,
RA   Van-Dorsselaer A., Poch O., Lecompte O., Reyrat J.-M.;
RT   "Interrupted coding sequences in Mycobacterium smegmatis: authentic
RT   mutations or sequencing errors?";
RL   Genome Biol. 8:R20.1-R20.9(2007).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700084 / mc(2)155;
RX   PubMed=18955433; DOI=10.1101/gr.081901.108;
RA   Gallien S., Perrodou E., Carapito C., Deshayes C., Reyrat J.-M.,
RA   Van Dorsselaer A., Poch O., Schaeffer C., Lecompte O.;
RT   "Ortho-proteogenomics: multiple proteomes investigation through orthology
RT   and a new MS-based protocol.";
RL   Genome Res. 19:128-135(2009).
RN   [4]
RP   PROBABLE FUNCTION, SUBUNIT, PHOSPHORYLATION, AND MUTAGENESIS OF ASP-56.
RC   STRAIN=ATCC 700084 / mc(2)155;
RX   PubMed=20233304; DOI=10.1111/j.1365-2958.2010.07110.x;
RA   Nguyen H.T., Wolff K.A., Cartabuke R.H., Ogwang S., Nguyen L.;
RT   "A lipoprotein modulates activity of the MtrAB two-component system to
RT   provide intrinsic multidrug resistance, cytokinetic control and cell wall
RT   homeostasis in Mycobacterium.";
RL   Mol. Microbiol. 76:348-364(2010).
CC   -!- FUNCTION: Member of the two-component regulatory system MtrA/MtrB,
CC       responding to environmental signals (Probable). Controls expression of
CC       a number of genes including dnaA, ripA, fbpB and probably itself.
CC       Probably plays a role in cell division. {ECO:0000305}.
CC   -!- SUBUNIT: Probably a monomer when inactive, phosphorylation may permit
CC       it to oligomerize (By similarity). The monomeric form does not seem to
CC       be phosphorylated. {ECO:0000250, ECO:0000269|PubMed:20233304}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
CC   -!- PTM: Phosphorylated by MtrB. {ECO:0000305|PubMed:20233304}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=AFP38307.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
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DR   EMBL; CP000480; ABK69775.1; -; Genomic_DNA.
DR   EMBL; CP001663; AFP38307.1; ALT_INIT; Genomic_DNA.
DR   RefSeq; WP_011727971.1; NZ_SIJM01000020.1.
DR   RefSeq; YP_886240.1; NC_008596.1.
DR   AlphaFoldDB; A0QTK2; -.
DR   SMR; A0QTK2; -.
DR   STRING; 246196.MSMEI_1835; -.
DR   PRIDE; A0QTK2; -.
DR   EnsemblBacteria; ABK69775; ABK69775; MSMEG_1874.
DR   EnsemblBacteria; AFP38307; AFP38307; MSMEI_1835.
DR   GeneID; 66733310; -.
DR   KEGG; msg:MSMEI_1835; -.
DR   KEGG; msm:MSMEG_1874; -.
DR   PATRIC; fig|246196.19.peg.1856; -.
DR   eggNOG; COG0745; Bacteria.
DR   OMA; NIHGEGF; -.
DR   OrthoDB; 817710at2; -.
DR   Proteomes; UP000000757; Chromosome.
DR   Proteomes; UP000006158; Chromosome.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0000160; P:phosphorelay signal transduction system; IEA:UniProtKB-KW.
DR   GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
DR   CDD; cd00383; trans_reg_C; 1.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR011006; CheY-like_superfamily.
DR   InterPro; IPR001867; OmpR/PhoB-type_DNA-bd.
DR   InterPro; IPR001789; Sig_transdc_resp-reg_receiver.
DR   InterPro; IPR039420; WalR-like.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   PANTHER; PTHR48111; PTHR48111; 1.
DR   Pfam; PF00072; Response_reg; 1.
DR   Pfam; PF00486; Trans_reg_C; 1.
DR   SMART; SM00448; REC; 1.
DR   SMART; SM00862; Trans_reg_C; 1.
DR   SUPFAM; SSF52172; SSF52172; 1.
DR   PROSITE; PS51755; OMPR_PHOB; 1.
DR   PROSITE; PS50110; RESPONSE_REGULATORY; 1.
PE   1: Evidence at protein level;
KW   Cytoplasm; DNA-binding; Phosphoprotein; Reference proteome; Transcription;
KW   Transcription regulation; Two-component regulatory system.
FT   CHAIN           1..228
FT                   /note="DNA-binding response regulator MtrA"
FT                   /id="PRO_0000421122"
FT   DOMAIN          7..120
FT                   /note="Response regulatory"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00169"
FT   DNA_BIND        128..227
FT                   /note="OmpR/PhoB-type"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01091"
FT   MOD_RES         56
FT                   /note="4-aspartylphosphate"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00169"
FT   MUTAGEN         56
FT                   /note="D->A: Does not complement an lpqB disruption mutant,
FT                   when overexpressed causes the same symptoms as an lpqB
FT                   disruption (antibiotic sensitivity, defects in cell
FT                   morphology and biofilm formation)."
FT                   /evidence="ECO:0000269|PubMed:20233304"
FT   MUTAGEN         56
FT                   /note="D->E: Complements an lpqB disruption mutant, when
FT                   overexpressed restores biofilm formation to the lpqB
FT                   disruption. Acts like a dominant negative to wild-type."
FT                   /evidence="ECO:0000269|PubMed:20233304"
SQ   SEQUENCE   228 AA;  25318 MW;  FA45C9E560D4B4CC CRC64;
     MDTMRQRILV VDDDPSLAEM LTIVLRGEGF DTAVIGDGSQ ALTAVRELRP DLVLLDLMLP
     GMNGIDVCRV LRADSGVPIV MLTAKTDTVD VVLGLESGAD DYVMKPFKPK ELVARVRARL
     RRNEDEPAEM LSIGDVEIDV PAHKVTRQGE QISLTPLEFD LLVALARKPR QVFTRDVLLE
     QVWGYRHPAD TRLVNVHVQR LRAKVEKDPE NPQVVLTVRG VGYKAGPP
 
 
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