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MTRFR_HUMAN
ID   MTRFR_HUMAN             Reviewed;         166 AA.
AC   Q9H3J6; Q8WUC6;
DT   04-DEC-2007, integrated into UniProtKB/Swiss-Prot.
DT   01-MAR-2001, sequence version 1.
DT   03-AUG-2022, entry version 144.
DE   RecName: Full=Mitochondrial translation release factor in rescue {ECO:0000305};
DE   Flags: Precursor;
GN   Name=MTRFR {ECO:0000312|HGNC:HGNC:26784}; ORFNames=C12orf65, My030;
OS   Homo sapiens (Human).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
OX   NCBI_TaxID=9606;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
RC   TISSUE=Fetal brain;
RA   Mao Y.M., Xie Y., Ying K.;
RL   Submitted (APR-1998) to the EMBL/GenBank/DDBJ databases.
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
RC   TISSUE=Lung;
RX   PubMed=14702039; DOI=10.1038/ng1285;
RA   Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R.,
RA   Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H.,
RA   Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.,
RA   Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K.,
RA   Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H.,
RA   Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M.,
RA   Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K.,
RA   Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T.,
RA   Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M.,
RA   Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S.,
RA   Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H.,
RA   Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K.,
RA   Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N.,
RA   Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S.,
RA   Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O.,
RA   Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H.,
RA   Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B.,
RA   Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y.,
RA   Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K.,
RA   Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T.,
RA   Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T.,
RA   Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y.,
RA   Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H.,
RA   Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y.,
RA   Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H.,
RA   Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O.,
RA   Isogai T., Sugano S.;
RT   "Complete sequencing and characterization of 21,243 full-length human
RT   cDNAs.";
RL   Nat. Genet. 36:40-45(2004).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA   Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M.,
RA   Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J.,
RA   Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S.,
RA   Turner R., Yooseph S., Lu F., Nusskern D.R., Shue B.C., Zheng X.H.,
RA   Zhong F., Delcher A.L., Huson D.H., Kravitz S.A., Mouchard L., Reinert K.,
RA   Remington K.A., Clark A.G., Waterman M.S., Eichler E.E., Adams M.D.,
RA   Hunkapiller M.W., Myers E.W., Venter J.C.;
RL   Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases.
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2).
RC   TISSUE=Blood, Colon, and Testis;
RX   PubMed=15489334; DOI=10.1101/gr.2596504;
RG   The MGC Project Team;
RT   "The status, quality, and expansion of the NIH full-length cDNA project:
RT   the Mammalian Gene Collection (MGC).";
RL   Genome Res. 14:2121-2127(2004).
RN   [5]
RP   SUBCELLULAR LOCATION.
RX   PubMed=20186120; DOI=10.1038/emboj.2010.14;
RA   Richter R., Rorbach J., Pajak A., Smith P.M., Wessels H.J., Huynen M.A.,
RA   Smeitink J.A., Lightowlers R.N., Chrzanowska-Lightowlers Z.M.;
RT   "A functional peptidyl-tRNA hydrolase, ICT1, has been recruited into the
RT   human mitochondrial ribosome.";
RL   EMBO J. 29:1116-1125(2010).
RN   [6]
RP   DOMAIN.
RX   PubMed=22821833; DOI=10.1002/prot.24152;
RA   Kogure H., Hikawa Y., Hagihara M., Tochio N., Koshiba S., Inoue Y.,
RA   Guntert P., Kigawa T., Yokoyama S., Nameki N.;
RT   "Solution structure and siRNA-mediated knockdown analysis of the
RT   mitochondrial disease-related protein C12orf65.";
RL   Proteins 80:2629-2642(2012).
RN   [7]
RP   INTERACTION WITH MTRES1.
RX   PubMed=31396629; DOI=10.1093/nar/gkz684;
RA   Gopalakrishna S., Pearce S.F., Dinan A.M., Schober F.A., Cipullo M.,
RA   Spaahr H., Khawaja A., Maffezzini C., Freyer C., Wredenberg A.,
RA   Atanassov I., Firth A.E., Rorbach J.;
RT   "C6orf203 is an RNA-binding protein involved in mitochondrial protein
RT   synthesis.";
RL   Nucleic Acids Res. 47:9386-9399(2019).
RN   [8] {ECO:0000312|PDB:7A5H}
RP   STRUCTURE BY ELECTRON MICROSCOPY (3.3 ANGSTROMS) OF 1-166 IN COMPLEX WITH
RP   MTRES1; PEPTIDYL TRNA AND MITORIBOSOMAL LARGE SUBUNIT, FUNCTION,
RP   INTERACTION WITH MTRES1, AND RNA-BINDING.
RX   PubMed=33243891; DOI=10.1126/science.abc7782;
RA   Desai N., Yang H., Chandrasekaran V., Kazi R., Minczuk M., Ramakrishnan V.;
RT   "Elongational stalling activates mitoribosome-associated quality control.";
RL   Science 370:1105-1110(2020).
RN   [9]
RP   INVOLVEMENT IN COXPD7, SUBCELLULAR LOCATION, VARIANT COXPD7 83-VAL--HIS-166
RP   DELINS GLY, CHARACTERIZATION OF VARIANT COXPD7 83-VAL--HIS-166 DELINS GLY,
RP   AND RNA-BINDING.
RX   PubMed=20598281; DOI=10.1016/j.ajhg.2010.06.004;
RA   Antonicka H., Ostergaard E., Sasarman F., Weraarpachai W., Wibrand F.,
RA   Pedersen A.M., Rodenburg R.J., van der Knaap M.S., Smeitink J.A.,
RA   Chrzanowska-Lightowlers Z.M., Shoubridge E.A.;
RT   "Mutations in C12orf65 in patients with encephalomyopathy and a
RT   mitochondrial translation defect.";
RL   Am. J. Hum. Genet. 87:115-122(2010).
RN   [10]
RP   INVOLVEMENT IN SPG55, AND VARIANT SPG55 132-ARG--HIS-166 DEL.
RX   PubMed=23188110; DOI=10.1136/jmedgenet-2012-101212;
RG   Japan Spastic Paraplegia Research Consortium (JASPAC);
RA   Shimazaki H., Takiyama Y., Ishiura H., Sakai C., Matsushima Y.,
RA   Hatakeyama H., Honda J., Sakoe K., Naoi T., Namekawa M., Fukuda Y.,
RA   Takahashi Y., Goto J., Tsuji S., Goto Y., Nakano I.;
RT   "A homozygous mutation of C12orf65 causes spastic paraplegia with optic
RT   atrophy and neuropathy (SPG55).";
RL   J. Med. Genet. 49:777-784(2012).
RN   [11]
RP   INVOLVEMENT IN SPG55, AND VARIANT SPG55 139-GLN--HIS-166 DEL.
RX   PubMed=24080142; DOI=10.1016/j.ejmg.2013.09.010;
RA   Buchert R., Uebe S., Radwan F., Tawamie H., Issa S., Shimazaki H.,
RA   Henneke M., Ekici A.B., Reis A., Abou Jamra R.;
RT   "Mutations in the mitochondrial gene C12ORF65 lead to syndromic autosomal
RT   recessive intellectual disability and show genotype phenotype
RT   correlation.";
RL   Eur. J. Med. Genet. 56:599-602(2013).
RN   [12]
RP   INVOLVEMENT IN SPG55, VARIANT SPG55 116-VAL--HIS-166 DEL, CHARACTERIZATION
RP   OF VARIANT SPG55 116-VAL--HIS-166 DEL, AND TISSUE SPECIFICITY.
RX   PubMed=24198383; DOI=10.1136/jnnp-2013-306387;
RG   UKBEC;
RA   Tucci A., Liu Y.T., Preza E., Pitceathly R.D., Chalasani A., Plagnol V.,
RA   Land J.M., Trabzuni D., Ryten M., Jaunmuktane Z., Reilly M.M., Brandner S.,
RA   Hargreaves I., Hardy J., Singleton A.B., Abramov A.Y., Houlden H.;
RT   "Novel C12orf65 mutations in patients with axonal neuropathy and optic
RT   atrophy.";
RL   J. Neurol. Neurosurg. Psych. 85:486-492(2014).
RN   [13]
RP   INVOLVEMENT IN SPG55.
RX   PubMed=26380172; DOI=10.3233/jnd-140003;
RA   Pyle A., Ramesh V., Bartsakoulia M., Boczonadi V., Gomez-Duran A.,
RA   Herczegfalvi A., Blakely E.L., Smertenko T., Duff J., Eglon G., Moore D.,
RA   Yu-Wai-Man P., Douroudis K., Santibanez-Koref M., Griffin H.,
RA   Lochmueller H., Karcagi V., Taylor R.W., Chinnery P.F., Horvath R.;
RT   "Behr's Syndrome is Typically Associated with Disturbed Mitochondrial
RT   Translation and Mutations in the C12orf65 Gene.";
RL   J. Neuromuscul. Dis. 1:55-63(2014).
RN   [14]
RP   INVOLVEMENT IN COXPD7, AND VARIANT COXPD7 116-VAL--HIS-166 DEL.
RX   PubMed=25995486; DOI=10.1136/jnnp-2014-310084;
RA   Imagawa E., Fattal-Valevski A., Eyal O., Miyatake S., Saada A.,
RA   Nakashima M., Tsurusaki Y., Saitsu H., Miyake N., Matsumoto N.;
RT   "Homozygous p.V116* mutation in C12orf65 results in Leigh syndrome.";
RL   J. Neurol. Neurosurg. Psych. 87:212-216(2016).
RN   [15]
RP   INVOLVEMENT IN COXPD7.
RX   PubMed=32478789; DOI=10.1590/1678-4685-gmb-2018-0271;
RA   Perrone E., Cavole T.R., Oliveira M.G., Virmond L.D.A., Silva M.F.B.,
RA   Soares M.F.F., Iglesias S.B.O., Falconi A., Silva J.S., Nakano V.,
RA   Milanezi M.F., Mendes C.S.C., Curiati M.A., Micheletti C.;
RT   "Leigh syndrome in a patient with a novel C12orf65 pathogenic variant: case
RT   report and literature review.";
RL   Genet. Mol. Biol. 43:e20180271-e20180271(2020).
RN   [16]
RP   INVOLVEMENT IN COXPD7.
RX   PubMed=32808965; DOI=10.1590/1678-4685-gmb-2020-0177;
RA   Finsterer J.;
RT   "The Leigh phenotype resulting from C12orf65 variants.";
RL   Genet. Mol. Biol. 43:e20200177-e20200177(2020).
CC   -!- FUNCTION: Part of a mitoribosome-associated quality control pathway
CC       that prevents aberrant translation by responding to interruptions
CC       during elongation (PubMed:33243891). As heterodimer with MTRES1, ejects
CC       the unfinished nascent chain and peptidyl transfer RNA (tRNA),
CC       respectively, from stalled ribosomes. Recruitment of mitoribosome
CC       biogenesis factors to these quality control intermediates suggests
CC       additional roles for MTRES1 and MTRF during mitoribosome rescue
CC       (PubMed:33243891). {ECO:0000269|PubMed:33243891}.
CC   -!- SUBUNIT: Interacts (via C-terminus) with MTRES1 (via S4 domain)
CC       (PubMed:33243891). Associates with mitoribosomal S39 large subunit,
CC       peptidyl tRNA and nascent chain (PubMed:33243891).
CC       {ECO:0000269|PubMed:33243891}.
CC   -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000269|PubMed:20186120,
CC       ECO:0000269|PubMed:20598281}.
CC   -!- ALTERNATIVE PRODUCTS:
CC       Event=Alternative splicing; Named isoforms=2;
CC       Name=1;
CC         IsoId=Q9H3J6-1; Sequence=Displayed;
CC       Name=2;
CC         IsoId=Q9H3J6-2; Sequence=VSP_029602, VSP_029603;
CC   -!- TISSUE SPECIFICITY: Expressed in all areas of the brain tested.
CC       {ECO:0000269|PubMed:24198383}.
CC   -!- DOMAIN: The GGQ domain interacts with the peptidyltransferase center
CC       (PTC) of the large ribosomal subunit to trigger nascent chain
CC       hydrolysis. {ECO:0000269|PubMed:22821833, ECO:0000269|PubMed:33243891}.
CC   -!- DISEASE: Combined oxidative phosphorylation deficiency 7 (COXPD7)
CC       [MIM:613559]: A mitochondrial disease resulting in encephalomyopathy.
CC       Clinical manifestations include psychomotor delay and regression,
CC       ataxia, optic atrophy, nystagmus and muscle atrophy and weakness.
CC       {ECO:0000269|PubMed:20598281, ECO:0000269|PubMed:25995486,
CC       ECO:0000269|PubMed:32478789, ECO:0000269|PubMed:32808965}. Note=The
CC       disease is caused by variants affecting the gene represented in this
CC       entry.
CC   -!- DISEASE: Spastic paraplegia 55, autosomal recessive (SPG55)
CC       [MIM:615035]: A form of spastic paraplegia, a neurodegenerative
CC       disorder characterized by a slow, gradual, progressive weakness and
CC       spasticity of the lower limbs. Rate of progression and the severity of
CC       symptoms are quite variable. Initial symptoms may include difficulty
CC       with balance, weakness and stiffness in the legs, muscle spasms, and
CC       dragging the toes when walking. Complicated forms are recognized by
CC       additional variable features including spastic quadriparesis, seizures,
CC       dementia, amyotrophy, extrapyramidal disturbance, cerebral or
CC       cerebellar atrophy, optic atrophy, and peripheral neuropathy, as well
CC       as by extra neurological manifestations. {ECO:0000269|PubMed:23188110,
CC       ECO:0000269|PubMed:24080142, ECO:0000269|PubMed:24198383,
CC       ECO:0000269|PubMed:26380172}. Note=The disease is caused by variants
CC       affecting the gene represented in this entry.
CC   -!- SIMILARITY: Belongs to the prokaryotic/mitochondrial release factor
CC       family. {ECO:0000305}.
CC   -!- CAUTION: In contrast to other members of the family, lacks the regions
CC       that come into close contact with the mRNA in the ribosomal A-site and
CC       determine the STOP codon specificity, suggesting a loss of codon
CC       specificity for translation release factor activity. {ECO:0000305}.
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DR   EMBL; AF061733; AAG43144.1; -; mRNA.
DR   EMBL; AK095982; BAC04665.1; -; mRNA.
DR   EMBL; CH471054; EAW98395.1; -; Genomic_DNA.
DR   EMBL; CH471054; EAW98396.1; -; Genomic_DNA.
DR   EMBL; BC018145; AAH18145.1; -; mRNA.
DR   EMBL; BC020885; AAH20885.1; -; mRNA.
DR   EMBL; BC062329; AAH62329.1; -; mRNA.
DR   CCDS; CCDS9244.1; -. [Q9H3J6-1]
DR   RefSeq; NP_001137377.1; NM_001143905.2. [Q9H3J6-1]
DR   RefSeq; NP_001181924.1; NM_001194995.1. [Q9H3J6-1]
DR   RefSeq; NP_689482.1; NM_152269.4. [Q9H3J6-1]
DR   RefSeq; XP_005253687.1; XM_005253630.4. [Q9H3J6-1]
DR   RefSeq; XP_011537282.1; XM_011538980.2. [Q9H3J6-1]
DR   PDB; 7A5H; EM; 3.30 A; C=1-166.
DR   PDBsum; 7A5H; -.
DR   AlphaFoldDB; Q9H3J6; -.
DR   SMR; Q9H3J6; -.
DR   BioGRID; 124847; 227.
DR   IntAct; Q9H3J6; 3.
DR   STRING; 9606.ENSP00000253233; -.
DR   iPTMnet; Q9H3J6; -.
DR   PhosphoSitePlus; Q9H3J6; -.
DR   BioMuta; C12orf65; -.
DR   DMDM; 74733574; -.
DR   EPD; Q9H3J6; -.
DR   MassIVE; Q9H3J6; -.
DR   MaxQB; Q9H3J6; -.
DR   PaxDb; Q9H3J6; -.
DR   PeptideAtlas; Q9H3J6; -.
DR   PRIDE; Q9H3J6; -.
DR   ProteomicsDB; 80723; -. [Q9H3J6-1]
DR   ProteomicsDB; 80724; -. [Q9H3J6-2]
DR   TopDownProteomics; Q9H3J6-1; -. [Q9H3J6-1]
DR   Antibodypedia; 31771; 58 antibodies from 16 providers.
DR   DNASU; 91574; -.
DR   Ensembl; ENST00000253233.6; ENSP00000253233.1; ENSG00000130921.9. [Q9H3J6-1]
DR   Ensembl; ENST00000366329.7; ENSP00000390647.1; ENSG00000130921.9. [Q9H3J6-1]
DR   Ensembl; ENST00000425637.3; ENSP00000506680.1; ENSG00000130921.9. [Q9H3J6-2]
DR   Ensembl; ENST00000429587.2; ENSP00000391513.2; ENSG00000130921.9. [Q9H3J6-1]
DR   Ensembl; ENST00000536130.2; ENSP00000443072.2; ENSG00000130921.9. [Q9H3J6-1]
DR   Ensembl; ENST00000538888.6; ENSP00000505059.1; ENSG00000130921.9. [Q9H3J6-2]
DR   Ensembl; ENST00000543139.2; ENSP00000444843.2; ENSG00000130921.9. [Q9H3J6-1]
DR   Ensembl; ENST00000546132.2; ENSP00000441796.2; ENSG00000130921.9. [Q9H3J6-2]
DR   Ensembl; ENST00000679849.1; ENSP00000505808.1; ENSG00000130921.9. [Q9H3J6-1]
DR   Ensembl; ENST00000680325.1; ENSP00000505277.1; ENSG00000130921.9. [Q9H3J6-2]
DR   GeneID; 91574; -.
DR   KEGG; hsa:91574; -.
DR   MANE-Select; ENST00000253233.6; ENSP00000253233.1; NM_152269.5; NP_689482.1.
DR   UCSC; uc001uen.4; human. [Q9H3J6-1]
DR   CTD; 91574; -.
DR   DisGeNET; 91574; -.
DR   GeneCards; MTRFR; -.
DR   HGNC; HGNC:26784; MTRFR.
DR   HPA; ENSG00000130921; Tissue enhanced (lymphoid).
DR   MalaCards; MTRFR; -.
DR   MIM; 613541; gene.
DR   MIM; 613559; phenotype.
DR   MIM; 615035; phenotype.
DR   neXtProt; NX_Q9H3J6; -.
DR   OpenTargets; ENSG00000130921; -.
DR   Orphanet; 320375; Autosomal recessive spastic paraplegia type 55.
DR   Orphanet; 254930; Combined oxidative phosphorylation defect type 7.
DR   VEuPathDB; HostDB:ENSG00000130921; -.
DR   eggNOG; KOG2726; Eukaryota.
DR   GeneTree; ENSGT00390000012759; -.
DR   InParanoid; Q9H3J6; -.
DR   OMA; WESSKNI; -.
DR   OrthoDB; 1415962at2759; -.
DR   PhylomeDB; Q9H3J6; -.
DR   TreeFam; TF323274; -.
DR   PathwayCommons; Q9H3J6; -.
DR   SignaLink; Q9H3J6; -.
DR   BioGRID-ORCS; 91574; 60 hits in 1073 CRISPR screens.
DR   ChiTaRS; C12orf65; human.
DR   GenomeRNAi; 91574; -.
DR   Pharos; Q9H3J6; Tbio.
DR   PRO; PR:Q9H3J6; -.
DR   Proteomes; UP000005640; Chromosome 12.
DR   RNAct; Q9H3J6; protein.
DR   Bgee; ENSG00000130921; Expressed in thymus and 185 other tissues.
DR   ExpressionAtlas; Q9H3J6; baseline and differential.
DR   Genevisible; Q9H3J6; HS.
DR   GO; GO:0005739; C:mitochondrion; IDA:UniProtKB.
DR   GO; GO:0043023; F:ribosomal large subunit binding; IDA:UniProtKB.
DR   GO; GO:0003747; F:translation release factor activity; IEA:InterPro.
DR   GO; GO:0000049; F:tRNA binding; IDA:UniProtKB.
DR   GO; GO:0072344; P:rescue of stalled ribosome; IDA:UniProtKB.
DR   InterPro; IPR000352; Pep_chain_release_fac_I.
DR   InterPro; IPR045853; Pep_chain_release_fac_I_sf.
DR   Pfam; PF00472; RF-1; 1.
DR   SUPFAM; SSF75620; SSF75620; 1.
PE   1: Evidence at protein level;
KW   3D-structure; Alternative splicing; Coiled coil; Disease variant;
KW   Hereditary spastic paraplegia; Mitochondrion; Neurodegeneration;
KW   Primary mitochondrial disease; Protein biosynthesis; Reference proteome;
KW   RNA-binding; Transit peptide.
FT   TRANSIT         1..35
FT                   /note="Mitochondrion"
FT                   /evidence="ECO:0000255"
FT   CHAIN           36..166
FT                   /note="Mitochondrial translation release factor in rescue"
FT                   /id="PRO_0000311835"
FT   REGION          57..121
FT                   /note="GGQ domain"
FT                   /evidence="ECO:0000250|UniProtKB:Q80VP5"
FT   REGION          122..148
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          127..160
FT                   /evidence="ECO:0000255"
FT   MOTIF           71..73
FT                   /note="GGQ"
FT                   /evidence="ECO:0000269|PubMed:24198383"
FT   VAR_SEQ         95..119
FT                   /note="CHQTRSVDQNRKLARKILQEKVDVF -> VDHRRPLRGEAPPKGSTASRDFS
FT                   QV (in isoform 2)"
FT                   /evidence="ECO:0000303|PubMed:15489334"
FT                   /id="VSP_029602"
FT   VAR_SEQ         120..166
FT                   /note="Missing (in isoform 2)"
FT                   /evidence="ECO:0000303|PubMed:15489334"
FT                   /id="VSP_029603"
FT   VARIANT         83..166
FT                   /note="VLKHIPSGIVVKCHQTRSVDQNRKLARKILQEKVDVFYNGENSPVHKEKREA
FT                   AKKKQERKKRAKETLEKKKLLKELWESSKKVH -> G (in COXPD7; decreased
FT                   cytochrome c oxidase activity in fibroblasts; severe
FT                   assembly defects in mitochondrial complexes I, IV and V
FT                   with a milder defect in the assembly of complex III; no
FT                   effect on mitochondrial transcripts, rRNAs and tRNAs
FT                   levels)"
FT                   /evidence="ECO:0000269|PubMed:20598281"
FT                   /id="VAR_084490"
FT   VARIANT         116..166
FT                   /note="Missing (in SPG55 and COXPD7; decreased activity of
FT                   mitochondrial respiratory chain; no effect on mitochondrial
FT                   morphology)"
FT                   /evidence="ECO:0000269|PubMed:24198383,
FT                   ECO:0000269|PubMed:25995486"
FT                   /id="VAR_084491"
FT   VARIANT         132..166
FT                   /note="Missing (in SPG55)"
FT                   /evidence="ECO:0000269|PubMed:23188110"
FT                   /id="VAR_084492"
FT   VARIANT         134
FT                   /note="A -> T (in dbSNP:rs1045496)"
FT                   /id="VAR_037325"
FT   VARIANT         139..166
FT                   /note="Missing (in SPG55)"
FT                   /evidence="ECO:0000269|PubMed:24080142"
FT                   /id="VAR_084493"
SQ   SEQUENCE   166 AA;  18828 MW;  CB9B74E0CC7E920C CRC64;
     MSTVGLFHFP TPLTRICPAP WGLRLWEKLT LLSPGIAVTP VQMAGKKDYP ALLSLDENEL
     EEQFVKGHGP GGQATNKTSN CVVLKHIPSG IVVKCHQTRS VDQNRKLARK ILQEKVDVFY
     NGENSPVHKE KREAAKKKQE RKKRAKETLE KKKLLKELWE SSKKVH
 
 
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