MUKB_VIBPA
ID MUKB_VIBPA Reviewed; 1487 AA.
AC Q87QW2;
DT 16-JAN-2004, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2003, sequence version 1.
DT 03-AUG-2022, entry version 101.
DE RecName: Full=Chromosome partition protein MukB {ECO:0000255|HAMAP-Rule:MF_01800};
DE AltName: Full=Structural maintenance of chromosome-related protein {ECO:0000255|HAMAP-Rule:MF_01800};
GN Name=mukB {ECO:0000255|HAMAP-Rule:MF_01800}; OrderedLocusNames=VP1037;
OS Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=223926;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RIMD 2210633;
RX PubMed=12620739; DOI=10.1016/s0140-6736(03)12659-1;
RA Makino K., Oshima K., Kurokawa K., Yokoyama K., Uda T., Tagomori K.,
RA Iijima Y., Najima M., Nakano M., Yamashita A., Kubota Y., Kimura S.,
RA Yasunaga T., Honda T., Shinagawa H., Hattori M., Iida T.;
RT "Genome sequence of Vibrio parahaemolyticus: a pathogenic mechanism
RT distinct from that of V. cholerae.";
RL Lancet 361:743-749(2003).
CC -!- FUNCTION: Plays a central role in chromosome condensation, segregation
CC and cell cycle progression. Functions as a homodimer, which is
CC essential for chromosome partition. Involved in negative DNA
CC supercoiling in vivo, and by this means organize and compact
CC chromosomes. May achieve or facilitate chromosome segregation by
CC condensation DNA from both sides of a centrally located replisome
CC during cell division. {ECO:0000255|HAMAP-Rule:MF_01800}.
CC -!- SUBUNIT: Homodimerization via its hinge domain. Binds to DNA via its C-
CC terminal region. Interacts, and probably forms a ternary complex, with
CC MukE and MukF via its C-terminal region. The complex formation is
CC stimulated by calcium or magnesium. Interacts with tubulin-related
CC protein FtsZ. {ECO:0000255|HAMAP-Rule:MF_01800}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm, nucleoid {ECO:0000255|HAMAP-
CC Rule:MF_01800}. Note=Restricted to the nucleoid region.
CC {ECO:0000255|HAMAP-Rule:MF_01800}.
CC -!- DOMAIN: The hinge domain, which separates the large intramolecular
CC coiled coil regions, allows the homodimerization, forming a V-shaped
CC homodimer. {ECO:0000255|HAMAP-Rule:MF_01800}.
CC -!- SIMILARITY: Belongs to the SMC family. MukB subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_01800}.
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DR EMBL; BA000031; BAC59300.1; -; Genomic_DNA.
DR RefSeq; NP_797416.1; NC_004603.1.
DR RefSeq; WP_011105766.1; NC_004603.1.
DR AlphaFoldDB; Q87QW2; -.
DR SMR; Q87QW2; -.
DR STRING; 223926.28806024; -.
DR EnsemblBacteria; BAC59300; BAC59300; BAC59300.
DR GeneID; 1188541; -.
DR KEGG; vpa:VP1037; -.
DR PATRIC; fig|223926.6.peg.983; -.
DR eggNOG; COG3096; Bacteria.
DR HOGENOM; CLU_004430_0_0_6; -.
DR OMA; FIAVYQH; -.
DR Proteomes; UP000002493; Chromosome 1.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-UniRule.
DR GO; GO:0009295; C:nucleoid; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0007049; P:cell cycle; IEA:UniProtKB-KW.
DR GO; GO:0051301; P:cell division; IEA:UniProtKB-KW.
DR GO; GO:0030261; P:chromosome condensation; IEA:UniProtKB-KW.
DR GO; GO:0007059; P:chromosome segregation; IEA:UniProtKB-UniRule.
DR GO; GO:0006260; P:DNA replication; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.70.3500; -; 1.
DR HAMAP; MF_01800; MukB; 1.
DR InterPro; IPR012090; MukB.
DR InterPro; IPR032520; MukB_hinge.
DR InterPro; IPR042501; MukB_hinge_sf.
DR InterPro; IPR007406; MukB_N_dom.
DR InterPro; IPR027417; P-loop_NTPase.
DR Pfam; PF04310; MukB; 1.
DR Pfam; PF16330; MukB_hinge; 1.
DR PIRSF; PIRSF005246; MukB; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
PE 3: Inferred from homology;
KW ATP-binding; Cell cycle; Cell division; Chromosome partition; Coiled coil;
KW Cytoplasm; DNA condensation; DNA-binding; Nucleotide-binding;
KW Reference proteome.
FT CHAIN 1..1487
FT /note="Chromosome partition protein MukB"
FT /id="PRO_0000068230"
FT REGION 667..784
FT /note="Flexible hinge"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01800"
FT COILED 297..458
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01800"
FT COILED 506..601
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01800"
FT COILED 637..666
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01800"
FT COILED 781..806
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01800"
FT COILED 836..1109
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01800"
FT COILED 1210..1266
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01800"
FT BINDING 34..41
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01800"
SQ SEQUENCE 1487 AA; 169746 MW; BB697C58C4189ED8 CRC64;
MIERGKYQSL TMVNWNGFFA RTFDIDGLVT TLSGGNGAGK STTMAAFITA LIPDQTLLHF
RNTTEAGSSQ SSRDKGLYGK LQPGACYAAL DVVNSRNQRL LFAVKLQQVA GRDKKVDIKP
FVIQGLPSHV KPTDILVESV SATQARVRQI NEVKDAIAEF EGVQFKAFSS IVDYHAQMFE
FGVIPKKLRN SSDRSKFYRL IEASLYGGIS SAITRSLRDY LLPQNGGVKK AFQDMESALR
ENRMTLEAIK TTQADRDLFK HLITESTNYV AADYMRHAND RRNKLEQTLS LRSELFGSRE
TLIEQNNLLN RVQEELELLI ESESALEQDY QAASDHLQLV QNALRQQEKI ERYQEDLEEL
SERLEEQMMV VEEAQERVMM VEEQATVAEE EVDSLKTQLA DYQQALDVQQ TRALQYQQAV
QALEKAKQLL GDDCLTAESA QALVSELKNK ESESTNALLS VKHKLDMSSA AAEQFETALK
LVQSIVGQVE RKDAAEQAKI VITKARESQQ IAQNEQQWRA QHRDLERSLN QQRQARELVK
EYQKQFHVEL TDEITFEQER ERHAMQIETL EMTQEELREQ RSEQRRLEQD AAAEINKLEA
IAPTWIAAND ALEKLREQSG VDLEDRHAVM SHMQVVLEQE KELSLAKDKL AERRSQLESE
IERLASPGGS NDPRLKGLAD TLGGVLLSEI YDDITIDDAP YFSAMYGPAR HAIVVSDLSG
IEEKLVELDD CPEDLYIIEG DIDAFDDSSF DAEELEGAVC VRMNDRQMRY SRFPEIPLFG
RAAREQRLEL LRNEREEVVE KHAKAAFDSQ KMQRLYQAFN QFVANHIQVA FEADPEQALA
NVREKRGQIA RVLADLEAKE QQHRSQLQTS KQALSSLDKL APNMALIEDD TLQARFDELE
EKIAQLSEAK AFLNNHAKAV AELEKIASAL DADPEQFDAL EAEYKAADEQ LQELKKQIFA
LSDLVERRHY FAYSDSVDLL NQSSELSEQL KAKLVQAEQM RTRSREELKQ AQGQMNQYNQ
VLASLKSSHQ AKLETVQEFK QELQEFGVNA DEGAEERAIR RRDELHERLH TSRSRKSEYE
RTITSTELEM KGLAKRLKKV QKEYAELRTF VVAAKAGWCS VLRLARENDV ERRLHKRELA
YMSADELRSM SDKSLGALRL AVANNDDLRD ALRLSEDNAR PERKVLFYIA VYQHLRERIR
QDIIRTDDPV EAIEEMEVEL ARLTEELTQR ENRLAISSES VASIIKKTIQ REQNRIRMLN
QGLSNISFGQ VKGVRLNVKI RESHEVLLHG LSSQQEQHKD LFESPRFTFS EAMAKLFQRV
NPHIDMGQRS PQVLGEELLD YRNYLELSVE VNRGSDGWLQ AESGALSTGE AIGTGQSILL
MVVQSWEEES RRLRSKDIIP CRLLFLDEAA RLDAKSISTL FELCDRLDMQ LLIAAPENIS
PEKGTTYKLV RKVFKDHEHV HVVGLRGFGQ TDKPKSEVQE MIEEFES