ID   MURD_STRPY              Reviewed;         452 AA.
AC   P0C0D7; O68388; P61418; Q99YV3; Q9FB03;
DT   13-SEP-2005, integrated into UniProtKB/Swiss-Prot.
DT   13-SEP-2005, sequence version 1.
DT   03-AUG-2022, entry version 79.
DE   RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase;
DE            EC=6.3.2.9 {ECO:0000269|PubMed:9524242};
DE   AltName: Full=D-glutamic acid-adding enzyme;
DE   AltName: Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase;
GN   Name=murD;
OS   Streptococcus pyogenes.
OC   Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae;
OC   Streptococcus.
OX   NCBI_TaxID=1314;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND CATALYTIC ACTIVITY.
RC   STRAIN=MB4439 / 740564;
RX   PubMed=9524242; DOI=10.1016/s0378-1119(98)00059-6;
RA   El-Sherbeini M., Geissler W.M., Pittman J., Yuan X., Wong K.K.,
RA   Pompliano D.L.;
RT   "Cloning and expression of Staphylococcus aureus and Streptococcus pyogenes
RT   murD genes encoding uridine diphosphate N-acetylmuramoyl-L-alanine:D-
RT   glutamate ligases.";
RL   Gene 210:117-125(1998).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 14-452.
RC   STRAIN=Sv / Serotype M23;
RA   Kyongsu H.;
RT   "A novel cloning method used arbitrarily primed PCR.";
RL   Submitted (JUL-1999) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Cell wall formation. Catalyzes the addition of glutamate to
CC       the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA).
CC       {ECO:0000250}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=ATP + D-glutamate + UDP-N-acetyl-alpha-D-muramoyl-L-alanine =
CC         ADP + H(+) + phosphate + UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-D-
CC         glutamate; Xref=Rhea:RHEA:16429, ChEBI:CHEBI:15378,
CC         ChEBI:CHEBI:29986, ChEBI:CHEBI:30616, ChEBI:CHEBI:43474,
CC         ChEBI:CHEBI:83898, ChEBI:CHEBI:83900, ChEBI:CHEBI:456216; EC=6.3.2.9;
CC         Evidence={ECO:0000269|PubMed:9524242};
CC   -!- PATHWAY: Cell wall biogenesis; peptidoglycan biosynthesis.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
CC   -!- SIMILARITY: Belongs to the MurCDEF family. {ECO:0000305}.
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DR   EMBL; AF035938; AAC38404.1; -; Genomic_DNA.
DR   EMBL; AB030645; BAB16028.1; -; Genomic_DNA.
DR   PIR; JC6561; JC6561.
DR   RefSeq; WP_011054713.1; NZ_WWFO01000008.1.
DR   AlphaFoldDB; P0C0D7; -.
DR   SMR; P0C0D7; -.
DR   eggNOG; COG0771; Bacteria.
DR   OMA; CNFENYL; -.
DR   UniPathway; UPA00219; -.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0008764; F:UDP-N-acetylmuramoylalanine-D-glutamate ligase activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0007049; P:cell cycle; IEA:UniProtKB-KW.
DR   GO; GO:0051301; P:cell division; IEA:UniProtKB-KW.
DR   GO; GO:0071555; P:cell wall organization; IEA:UniProtKB-KW.
DR   GO; GO:0009252; P:peptidoglycan biosynthetic process; IEA:UniProtKB-UniRule.
DR   GO; GO:0008360; P:regulation of cell shape; IEA:UniProtKB-KW.
DR   Gene3D; 3.40.1190.10; -; 1.
DR   Gene3D; 3.90.190.20; -; 1.
DR   HAMAP; MF_00639; MurD; 1.
DR   InterPro; IPR036565; Mur-like_cat_sf.
DR   InterPro; IPR004101; Mur_ligase_C.
DR   InterPro; IPR036615; Mur_ligase_C_dom_sf.
DR   InterPro; IPR013221; Mur_ligase_cen.
DR   InterPro; IPR005762; MurD.
DR   Pfam; PF02875; Mur_ligase_C; 1.
DR   Pfam; PF08245; Mur_ligase_M; 1.
DR   SUPFAM; SSF53244; SSF53244; 1.
DR   SUPFAM; SSF53623; SSF53623; 1.
DR   TIGRFAMs; TIGR01087; murD; 1.
PE   1: Evidence at protein level;
KW   ATP-binding; Cell cycle; Cell division; Cell shape;
KW   Cell wall biogenesis/degradation; Cytoplasm; Ligase; Nucleotide-binding;
KW   Peptidoglycan synthesis.
FT   CHAIN           1..452
FT                   /note="UDP-N-acetylmuramoylalanine--D-glutamate ligase"
FT                   /id="PRO_0000109098"
FT   BINDING         119..125
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000255"
FT   CONFLICT        237
FT                   /note="Q -> K (in Ref. 2; BAB16028)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   452 AA;  48728 MW;  1673FECD549D7C86 CRC64;
     MKVISNFQNK KILILGLAKS GEAAAKLLTK LGALVTVNDS KPFDQNPAAQ ALLEEGIKVI
     CGSHPVELLD EDFEYMVKNP GIPYDNPMVK RALAKEIPIL TEVELAYFVS EAPIIGITGS
     NGKTTTTTMI ADVLNAGGQS ALLSGNIGYP ASKVVQKAIA GDTLVMELSS FQLVGVNAFR
     PHIAVITNLM PTHLDYHGSF EDYVAAKWMI QAQMTESDYL ILNANQEISA TLAKTTQATV
     IPFSTQKVVD GAYLKDGILY FKEQAIIAAT DLGVPGSHNI ENALATIAVA KLSGIADDII
     AQCLSHFGGV KHRLQRVGQI KDITFYNDSK STNILATQKA LSGFDNSRLI LIAGGLDRGN
     EFDDLVPDLL GLKQMIILGE SAERMKRAAN KAEVSYLEAR NVAEATELAF KLAQTGDTIL
     LSPANASWDM YPNFEVRGDE FLATFDCLRG DA