MYCB_DANRE
ID MYCB_DANRE Reviewed; 396 AA.
AC Q7ZVS9;
DT 09-JAN-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2003, sequence version 1.
DT 03-AUG-2022, entry version 122.
DE RecName: Full=Transcriptional regulator Myc-B;
DE Short=c-Myc-B;
GN Name=mycb {ECO:0000312|EMBL:AAH45424.1}; ORFNames=zgc:55680;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1] {ECO:0000312|EMBL:AAH45424.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=AB {ECO:0000312|EMBL:AAH45424.1};
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (JAN-2003) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Transcription factor that binds DNA in a non-specific manner,
CC yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'.
CC Activates the transcription of growth-related genes.
CC {ECO:0000250|UniProtKB:P01106}.
CC -!- SUBUNIT: Efficient DNA binding requires dimerization with another bHLH
CC protein. Binds DNA as a heterodimer with max (By similarity).
CC {ECO:0000250|UniProtKB:P01106}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- DOMAIN: The 9aaTAD motif is a transactivation domain present in a large
CC number of yeast and animal transcription factors.
CC {ECO:0000250|UniProtKB:P01106}.
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DR EMBL; BC045424; AAH45424.1; -; mRNA.
DR RefSeq; NP_956466.1; NM_200172.1.
DR AlphaFoldDB; Q7ZVS9; -.
DR SMR; Q7ZVS9; -.
DR STRING; 7955.ENSDARP00000010970; -.
DR PaxDb; Q7ZVS9; -.
DR Ensembl; ENSDART00000005143; ENSDARP00000010970; ENSDARG00000007241.
DR GeneID; 393141; -.
DR KEGG; dre:393141; -.
DR CTD; 393141; -.
DR ZFIN; ZDB-GENE-040426-780; mycb.
DR eggNOG; KOG2483; Eukaryota.
DR GeneTree; ENSGT00940000155285; -.
DR HOGENOM; CLU_052560_0_0_1; -.
DR InParanoid; Q7ZVS9; -.
DR OMA; RCHVNIQ; -.
DR OrthoDB; 877891at2759; -.
DR PhylomeDB; Q7ZVS9; -.
DR TreeFam; TF106001; -.
DR PRO; PR:Q7ZVS9; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Chromosome 2.
DR Bgee; ENSDARG00000007241; Expressed in tail bud paraxial mesoderm and 40 other tissues.
DR ExpressionAtlas; Q7ZVS9; baseline and differential.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; ISS:UniProtKB.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0060216; P:definitive hemopoiesis; IMP:ZFIN.
DR GO; GO:0002244; P:hematopoietic progenitor cell differentiation; IMP:ZFIN.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR Gene3D; 4.10.280.10; -; 1.
DR InterPro; IPR011598; bHLH_dom.
DR InterPro; IPR036638; HLH_DNA-bd_sf.
DR InterPro; IPR003327; Myc-LZ.
DR InterPro; IPR002418; Tscrpt_reg_Myc.
DR InterPro; IPR012682; Tscrpt_reg_Myc_N.
DR Pfam; PF00010; HLH; 1.
DR Pfam; PF02344; Myc-LZ; 1.
DR Pfam; PF01056; Myc_N; 1.
DR PIRSF; PIRSF001705; Myc_protein; 1.
DR PRINTS; PR00044; LEUZIPPRMYC.
DR SMART; SM00353; HLH; 1.
DR SUPFAM; SSF47459; SSF47459; 1.
DR PROSITE; PS50888; BHLH; 1.
PE 2: Evidence at transcript level;
KW Activator; DNA-binding; Glycoprotein; Nucleus; Proto-oncogene;
KW Reference proteome; Transcription; Transcription regulation.
FT CHAIN 1..396
FT /note="Transcriptional regulator Myc-B"
FT /id="PRO_0000271254"
FT DOMAIN 313..365
FT /note="bHLH"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00981"
FT REGION 183..251
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 298..318
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 372..393
FT /note="Leucine-zipper"
FT MOTIF 79..87
FT /note="9aaTAD"
FT /evidence="ECO:0000250|UniProtKB:P01106"
FT COMPBIAS 197..211
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 212..230
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 303..318
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CARBOHYD 56
FT /note="O-linked (GlcNAc) threonine"
FT /evidence="ECO:0000250|UniProtKB:P01106"
SQ SEQUENCE 396 AA; 44919 MW; 849A0AE3BBC18BAA CRC64;
MPLNSSMECK NYDYDYDSYQ PYFYFDNEDE DFYNHQHGQP PAPSEDIWKK FELLPTPPLS
PSRRPSLSDP FPSTADKLEM VSEFLGDDVV NHSIICDADY SQSFLKSIII QDCMWSGFSA
AAKLEKVVSE RLASLQAARK ESSRTESADI CRSVGFLQDM STPASQCIDP SVVFPFPLTD
STKPCKPAPT PASTTLPLDT PPNSGSSSSS SDSESDDEDD EDEEEEEEID VVTVEKRKSV
KKSDANATHQ SPVVLKRCHV NIHQHNYAAH PSTRNEQPAV KRIKFESHIR VFKQISHNRK
CASPRTSDSE DNDKRRTHNV LERQRRNELK LSFFALRDVI PDVANNEKAA KVVILKKATE
CIASMQEDEQ RLISLKEQLR RKCEHLKQRL EQLSCS