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MYC_PANTR
ID   MYC_PANTR               Reviewed;         439 AA.
AC   P23583; A2T708; Q8MJ74;
DT   01-NOV-1991, integrated into UniProtKB/Swiss-Prot.
DT   01-NOV-1991, sequence version 1.
DT   03-AUG-2022, entry version 154.
DE   RecName: Full=Myc proto-oncogene protein;
DE   AltName: Full=Proto-oncogene c-Myc;
DE   AltName: Full=Transcription factor p64;
GN   Name=MYC;
OS   Pan troglodytes (Chimpanzee).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Pan.
OX   NCBI_TaxID=9598;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX   PubMed=1999286; DOI=10.1016/0378-1119(91)90056-h;
RA   Argaut C., Rigolet M., Eladari M.E., Galibert F.;
RT   "Cloning and nucleotide sequence of the chimpanzee c-myc gene.";
RL   Gene 97:231-237(1991).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RA   Nickel G.C., Tefft D.L., Trevarthen K., Funt J., Adams M.D.;
RT   "Positive selection in transcription factor genes on the human lineage.";
RL   Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
RN   [3]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 276-433.
RX   PubMed=12384613; DOI=10.1093/nar/gnf110;
RA   Smith S.J., Vigilant L., Morin P.A.;
RT   "The effects of sequence length and oligonucleotide mismatches on 5'
RT   exonuclease assay efficiency.";
RL   Nucleic Acids Res. 30:E111-E111(2002).
CC   -!- FUNCTION: Transcription factor that binds DNA in a non-specific manner,
CC       yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'.
CC       Activates the transcription of growth-related genes. Binds to the VEGFA
CC       promoter, promoting VEGFA production and subsequent sprouting
CC       angiogenesis. Regulator of somatic reprogramming, controls self-renewal
CC       of embryonic stem cells. Functions with TAF6L to activate target gene
CC       expression through RNA polymerase II pause release (By similarity).
CC       Positively regulates transcription of HNRNPA1, HNRNPA2 and PTBP1 which
CC       in turn regulate splicing of pyruvate kinase PKM by binding
CC       repressively to sequences flanking PKM exon 9, inhibiting exon 9
CC       inclusion and resulting in exon 10 inclusion and production of the PKM
CC       M2 isoform (By similarity). {ECO:0000250|UniProtKB:P01106,
CC       ECO:0000250|UniProtKB:P01108}.
CC   -!- SUBUNIT: Efficient DNA binding requires dimerization with another bHLH
CC       protein. Binds DNA as a heterodimer with MAX (By similarity). Interacts
CC       with TAF1C and SPAG9. Interacts with PARP10. Interacts with KDM5A and
CC       KDM5B. Interacts (when phosphorylated at Thr-58 and Ser-62) with FBXW7.
CC       Interacts with PIM2. Interacts with RIOX1. The heterodimer MYC:MAX
CC       interacts with ABI1; the interaction may enhance MYC:MAX
CC       transcriptional activity. Interacts with TRIM6 (By similarity).
CC       Interacts with NPM1; the binary complex is recruited to the promoter of
CC       MYC target genes and enhances their transcription (By similarity).
CC       Interacts with CIP2A; leading to the stabilization of MYC (By
CC       similarity). {ECO:0000250|UniProtKB:P01106,
CC       ECO:0000250|UniProtKB:P01108}.
CC   -!- SUBCELLULAR LOCATION: Nucleus, nucleoplasm
CC       {ECO:0000250|UniProtKB:P01106}. Nucleus, nucleolus
CC       {ECO:0000250|UniProtKB:P01106}.
CC   -!- DOMAIN: The 9aaTAD motif is a transactivation domain present in a large
CC       number of yeast and animal transcription factors.
CC       {ECO:0000250|UniProtKB:P01106}.
CC   -!- PTM: Phosphorylated by PRKDC (By similarity). Phosphorylation at Ser-
CC       329 by PIM2 leads to the stabilization of MYC (By similarity).
CC       Phosphorylation at Ser-62 by CDK2 prevents Ras-induced senescence.
CC       Phosphorylated at Ser-62 by DYRK2; this primes the protein for
CC       subsequent phosphorylation by GSK3B at Thr-58. Phosphorylation at Thr-
CC       58 and Ser-62 by GSK3 is required for ubiquitination and degradation by
CC       the proteasome. Dephosphorylation at Ser-62 by protein phosphatase 2A
CC       (PPP2CA) promotes its degradation; interaction with PPP2CA is enhanced
CC       by AMBRA1 (By similarity). {ECO:0000250|UniProtKB:P01106,
CC       ECO:0000250|UniProtKB:P01108}.
CC   -!- PTM: Ubiquitinated by the SCF(FBXW7) complex when phosphorylated at
CC       Thr-58 and Ser-62, leading to its degradation by the proteasome.
CC       Ubiquitination is counteracted by USP28 in the nucleoplasm and USP36 in
CC       the nucleolus, both interacting with of FBXW7, leading to its
CC       deubiquitination and preventing degradation. Also polyubiquitinated by
CC       the DCX(TRPC4AP) complex. Ubiquitinated by TRIM6 in a phosphorylation-
CC       independent manner. {ECO:0000250|UniProtKB:P01106,
CC       ECO:0000250|UniProtKB:P01108}.
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DR   EMBL; M38057; AAA72907.1; -; Genomic_DNA.
DR   EMBL; DQ977348; ABM91963.1; -; Genomic_DNA.
DR   EMBL; AF519445; AAN03870.1; -; Genomic_DNA.
DR   PIR; JU0449; JU0449.
DR   AlphaFoldDB; P23583; -.
DR   BMRB; P23583; -.
DR   STRING; 9598.ENSPTRP00000035190; -.
DR   PaxDb; P23583; -.
DR   eggNOG; KOG2483; Eukaryota.
DR   InParanoid; P23583; -.
DR   Proteomes; UP000002277; Unplaced.
DR   GO; GO:0005730; C:nucleolus; ISS:UniProtKB.
DR   GO; GO:0005654; C:nucleoplasm; ISS:UniProtKB.
DR   GO; GO:0005634; C:nucleus; ISS:UniProtKB.
DR   GO; GO:0003677; F:DNA binding; ISS:UniProtKB.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:UniProtKB.
DR   GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; ISS:UniProtKB.
DR   GO; GO:0070888; F:E-box binding; ISS:UniProtKB.
DR   GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR   GO; GO:0044877; F:protein-containing complex binding; ISS:UniProtKB.
DR   GO; GO:0006879; P:cellular iron ion homeostasis; ISS:UniProtKB.
DR   GO; GO:0006974; P:cellular response to DNA damage stimulus; ISS:UniProtKB.
DR   GO; GO:0006338; P:chromatin remodeling; ISS:UniProtKB.
DR   GO; GO:0051276; P:chromosome organization; ISS:UniProtKB.
DR   GO; GO:0000082; P:G1/S transition of mitotic cell cycle; ISS:UniProtKB.
DR   GO; GO:0000165; P:MAPK cascade; ISS:UniProtKB.
DR   GO; GO:0043066; P:negative regulation of apoptotic process; ISS:UniProtKB.
DR   GO; GO:0051782; P:negative regulation of cell division; ISS:UniProtKB.
DR   GO; GO:0045656; P:negative regulation of monocyte differentiation; ISS:UniProtKB.
DR   GO; GO:0032873; P:negative regulation of stress-activated MAPK cascade; ISS:UniProtKB.
DR   GO; GO:0043280; P:positive regulation of cysteine-type endopeptidase activity involved in apoptotic process; ISS:UniProtKB.
DR   GO; GO:2000573; P:positive regulation of DNA biosynthetic process; ISS:UniProtKB.
DR   GO; GO:0050679; P:positive regulation of epithelial cell proliferation; ISS:UniProtKB.
DR   GO; GO:0048146; P:positive regulation of fibroblast proliferation; ISS:UniProtKB.
DR   GO; GO:2001022; P:positive regulation of response to DNA damage stimulus; ISS:UniProtKB.
DR   GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; ISS:UniProtKB.
DR   GO; GO:0045893; P:positive regulation of transcription, DNA-templated; ISS:UniProtKB.
DR   GO; GO:1904672; P:regulation of somatic stem cell population maintenance; ISS:UniProtKB.
DR   GO; GO:0032204; P:regulation of telomere maintenance; ISS:UniProtKB.
DR   GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR   GO; GO:0006355; P:regulation of transcription, DNA-templated; ISS:UniProtKB.
DR   GO; GO:0010332; P:response to gamma radiation; ISS:UniProtKB.
DR   GO; GO:0009410; P:response to xenobiotic stimulus; ISS:UniProtKB.
DR   Gene3D; 4.10.280.10; -; 1.
DR   InterPro; IPR011598; bHLH_dom.
DR   InterPro; IPR036638; HLH_DNA-bd_sf.
DR   InterPro; IPR003327; Myc-LZ.
DR   InterPro; IPR002418; Tscrpt_reg_Myc.
DR   InterPro; IPR012682; Tscrpt_reg_Myc_N.
DR   Pfam; PF00010; HLH; 1.
DR   Pfam; PF02344; Myc-LZ; 1.
DR   Pfam; PF01056; Myc_N; 1.
DR   PIRSF; PIRSF001705; Myc_protein; 1.
DR   PRINTS; PR00044; LEUZIPPRMYC.
DR   SMART; SM00353; HLH; 1.
DR   SUPFAM; SSF47459; SSF47459; 1.
DR   PROSITE; PS50888; BHLH; 1.
PE   3: Inferred from homology;
KW   Acetylation; Activator; DNA-binding; Glycoprotein; Isopeptide bond;
KW   Nucleus; Phosphoprotein; Proto-oncogene; Reference proteome; Transcription;
KW   Transcription regulation; Ubl conjugation.
FT   CHAIN           1..439
FT                   /note="Myc proto-oncogene protein"
FT                   /id="PRO_0000127297"
FT   DOMAIN          354..406
FT                   /note="bHLH"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00981"
FT   REGION          201..295
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          334..360
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          413..434
FT                   /note="Leucine-zipper"
FT   MOTIF           100..108
FT                   /note="9aaTAD"
FT                   /evidence="ECO:0000250|UniProtKB:P01106"
FT   COMPBIAS        201..234
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        345..360
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   MOD_RES         6
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:P01106"
FT   MOD_RES         8
FT                   /note="Phosphothreonine"
FT                   /evidence="ECO:0000250|UniProtKB:P01106"
FT   MOD_RES         58
FT                   /note="Phosphothreonine; by GSK3; alternate"
FT                   /evidence="ECO:0000250|UniProtKB:P01106"
FT   MOD_RES         62
FT                   /note="Phosphoserine; by DYRK2, GSK3 and CDK2"
FT                   /evidence="ECO:0000250|UniProtKB:P01106"
FT   MOD_RES         71
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:P01106"
FT   MOD_RES         143
FT                   /note="N6-acetyllysine; by PCAF; alternate"
FT                   /evidence="ECO:0000250|UniProtKB:P01106"
FT   MOD_RES         148
FT                   /note="N6-acetyllysine; alternate"
FT                   /evidence="ECO:0000250|UniProtKB:P01106"
FT   MOD_RES         157
FT                   /note="N6-acetyllysine; by PCAF"
FT                   /evidence="ECO:0000250|UniProtKB:P01106"
FT   MOD_RES         161
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:P01106"
FT   MOD_RES         275
FT                   /note="N6-acetyllysine; by PCAF"
FT                   /evidence="ECO:0000250|UniProtKB:P01106"
FT   MOD_RES         293
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:P01106"
FT   MOD_RES         317
FT                   /note="N6-acetyllysine; by PCAF"
FT                   /evidence="ECO:0000250|UniProtKB:P01106"
FT   MOD_RES         323
FT                   /note="N6-acetyllysine; by PCAF"
FT                   /evidence="ECO:0000250|UniProtKB:P01106"
FT   MOD_RES         329
FT                   /note="Phosphoserine; by PIM2; in vitro"
FT                   /evidence="ECO:0000250|UniProtKB:P01108"
FT   MOD_RES         371
FT                   /note="N6-acetyllysine; by PCAF"
FT                   /evidence="ECO:0000250|UniProtKB:P01106"
FT   CARBOHYD        58
FT                   /note="O-linked (GlcNAc) threonine; alternate"
FT                   /evidence="ECO:0000250"
FT   CROSSLNK        52
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in SUMO2)"
FT                   /evidence="ECO:0000250|UniProtKB:P01106"
FT   CROSSLNK        143
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in SUMO2); alternate"
FT                   /evidence="ECO:0000250|UniProtKB:P01106"
FT   CROSSLNK        148
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in SUMO2); alternate"
FT                   /evidence="ECO:0000250|UniProtKB:P01106"
FT   CROSSLNK        298
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in SUMO2)"
FT                   /evidence="ECO:0000250|UniProtKB:P01106"
FT   CONFLICT        202
FT                   /note="S -> G (in Ref. 2; ABM91963)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        439
FT                   /note="A -> V (in Ref. 2; ABM91963)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   439 AA;  48846 MW;  E217FFCBCE24A560 CRC64;
     MPLNVSFTNR NYDLDYDSVQ PYFYCDEEEN FYQQQQQSEL QPPAPSEDIW KKFELLPTPP
     LSPSRRSGLC SPSYVAVTPF SLRGDNDGGG GSFSTADQLE MVTELLGGDM VNQSFICDPD
     DETFIKNIII QDCMWSGFSA AAKLVSEKLA SYQAARKDSG SPNPARGHSV CSTSSLYLQD
     LSAAASECID PSVVFPYPLN DSSSPKSCPS QDSSAFSPSS DSLLSSTESS PQGSPEPLVL
     HEETPPTTSS DSEEEQEDEE EIDVVSVEKR QAPGKRSESG SPSAGGHSKP PHSPLVLKRC
     HVSTHQHNYA APPSTRKDYP AAKRVKLDSV RVLRQISNNR KCTSPRSSDT EENDKRRTHN
     VLERQRRNEL KRSFFALRDQ IPELENNEKA PKVVILKKAT AYILSVQAEE QKLISEEDLL
     RKRREQLKHK LEQLRNSCA
 
 
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