MYF6_BOVIN
ID MYF6_BOVIN Reviewed; 242 AA.
AC Q7YS80; A5PJL5;
DT 22-NOV-2005, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2003, sequence version 1.
DT 03-AUG-2022, entry version 113.
DE RecName: Full=Myogenic factor 6;
DE Short=Myf-6;
DE AltName: Full=Muscle-specific regulatory factor 4;
GN Name=MYF6; Synonyms=MRF4;
OS Bos taurus (Bovine).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae;
OC Bovinae; Bos.
OX NCBI_TaxID=9913;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC TISSUE=Skeletal muscle;
RA Muroya S., Nakajima I., Chikuni K.;
RT "Effect of myogenic regulatory factor siRNAs on differentiation of bovine
RT skeletal muscle cells.";
RL Submitted (MAY-2003) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=Hereford; TISSUE=Fetal muscle;
RG NIH - Mammalian Gene Collection (MGC) project;
RL Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Involved in muscle differentiation (myogenic factor). Induces
CC fibroblasts to differentiate into myoblasts. Probable sequence specific
CC DNA-binding protein (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Efficient DNA binding requires dimerization with another bHLH
CC protein. Interacts with CSRP3. {ECO:0000250,
CC ECO:0000250|UniProtKB:P19335}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00981}.
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DR EMBL; AB110601; BAC76804.1; -; mRNA.
DR EMBL; BC142159; AAI42160.1; -; mRNA.
DR RefSeq; NP_861527.1; NM_181811.1.
DR AlphaFoldDB; Q7YS80; -.
DR SMR; Q7YS80; -.
DR STRING; 9913.ENSBTAP00000018607; -.
DR PaxDb; Q7YS80; -.
DR PRIDE; Q7YS80; -.
DR Ensembl; ENSBTAT00000018607; ENSBTAP00000018607; ENSBTAG00000014003.
DR GeneID; 281336; -.
DR KEGG; bta:281336; -.
DR CTD; 4618; -.
DR VEuPathDB; HostDB:ENSBTAG00000014003; -.
DR VGNC; VGNC:31793; MYF6.
DR eggNOG; KOG3960; Eukaryota.
DR GeneTree; ENSGT00950000182959; -.
DR HOGENOM; CLU_100258_0_0_1; -.
DR InParanoid; Q7YS80; -.
DR OMA; SPCQDQI; -.
DR OrthoDB; 1471470at2759; -.
DR TreeFam; TF316344; -.
DR Proteomes; UP000009136; Chromosome 5.
DR Bgee; ENSBTAG00000014003; Expressed in gluteus medius and 53 other tissues.
DR ExpressionAtlas; Q7YS80; baseline.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0045663; P:positive regulation of myoblast differentiation; IBA:GO_Central.
DR GO; GO:0048743; P:positive regulation of skeletal muscle fiber development; IBA:GO_Central.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR GO; GO:0035914; P:skeletal muscle cell differentiation; IBA:GO_Central.
DR Gene3D; 4.10.280.10; -; 1.
DR InterPro; IPR011598; bHLH_dom.
DR InterPro; IPR036638; HLH_DNA-bd_sf.
DR InterPro; IPR002546; MyoD_N.
DR InterPro; IPR039704; Myogenic_factor.
DR PANTHER; PTHR11534; PTHR11534; 1.
DR Pfam; PF01586; Basic; 1.
DR Pfam; PF00010; HLH; 1.
DR SMART; SM00520; BASIC; 1.
DR SMART; SM00353; HLH; 1.
DR SUPFAM; SSF47459; SSF47459; 1.
DR PROSITE; PS50888; BHLH; 1.
PE 2: Evidence at transcript level;
KW Developmental protein; Differentiation; DNA-binding; Myogenesis; Nucleus;
KW Reference proteome.
FT CHAIN 1..242
FT /note="Myogenic factor 6"
FT /id="PRO_0000127350"
FT DOMAIN 93..144
FT /note="bHLH"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00981"
FT REGION 31..63
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 38..52
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 242 AA; 26976 MW; 0359147B18071020 CRC64;
MMMDLFETGS YFFYLDGENV TLQPLEVAEG SPLYPGSDGT LSPCQDQMPP EAGSDSSGEE
HVLAPPGLQP PHCPGQCLIW ACKTCKRKSA PTDRRKAATL RERRRLKKIN EAFEALKRRT
VANPNQRLPK VEILRSAINY IERLQDLLHR LDQQDKMQEL GVDPFSYRPK QENLEGADFL
RTCSSQWPSV SDHSRGLVIT AKEGGTSIDS SASSSLRCLS SIVDSISSEE HKLPCVEEVV
EK