MYOD1_CAEBR
ID MYOD1_CAEBR Reviewed; 329 AA.
AC Q17295; A8XHP0;
DT 01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1997, sequence version 1.
DT 03-AUG-2022, entry version 118.
DE RecName: Full=Myoblast determination protein 1 homolog;
DE Short=MyoD protein 1;
GN Name=hlh-1; ORFNames=CBG13470;
OS Caenorhabditis briggsae.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6238;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=7958441; DOI=10.1006/dbio.1994.1302;
RA Krause M., Harrison S.W., Xu S.Q., Chen L., Fire A.;
RT "Elements regulating cell- and stage-specific expression of the C. elegans
RT MyoD family homolog hlh-1.";
RL Dev. Biol. 166:133-148(1994).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AF16;
RX PubMed=14624247; DOI=10.1371/journal.pbio.0000045;
RA Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N.,
RA Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P.,
RA Fitch D.H.A., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W.,
RA Hillier L.W., Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A.,
RA Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E.,
RA Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K.,
RA Durbin R.M., Waterston R.H.;
RT "The genome sequence of Caenorhabditis briggsae: a platform for comparative
RT genomics.";
RL PLoS Biol. 1:166-192(2003).
CC -!- FUNCTION: Accumulation defines the body wall muscle cell fate during
CC embryogenesis.
CC -!- SUBUNIT: Efficient DNA binding requires dimerization with another bHLH
CC protein.
CC -!- SUBCELLULAR LOCATION: Nucleus.
CC -!- TISSUE SPECIFICITY: Body wall muscle cells; in clonal muscle
CC precursors, in a set of early embryonic blastomeres (the ms-
CC granddaughters), and in six glial-like cells called GLRS.
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DR EMBL; U05000; AAA74943.1; -; Genomic_DNA.
DR EMBL; HE600919; CAP32157.3; -; Genomic_DNA.
DR RefSeq; XP_002630090.1; XM_002630044.1.
DR AlphaFoldDB; Q17295; -.
DR SMR; Q17295; -.
DR STRING; 6238.CBG13470; -.
DR PRIDE; Q17295; -.
DR GeneID; 8572906; -.
DR KEGG; cbr:CBG_13470; -.
DR CTD; 8572906; -.
DR WormBase; CBG13470a; CBP40297; WBGene00034231; Cbr-hlh-1.
DR eggNOG; KOG3960; Eukaryota.
DR HOGENOM; CLU_872198_0_0_1; -.
DR InParanoid; Q17295; -.
DR OMA; IMEQNQH; -.
DR OrthoDB; 1433570at2759; -.
DR Proteomes; UP000008549; Chromosome II.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.
DR GO; GO:0007517; P:muscle organ development; IEA:UniProtKB-KW.
DR GO; GO:0045663; P:positive regulation of myoblast differentiation; IBA:GO_Central.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR Gene3D; 4.10.280.10; -; 1.
DR InterPro; IPR011598; bHLH_dom.
DR InterPro; IPR036638; HLH_DNA-bd_sf.
DR InterPro; IPR039704; Myogenic_factor.
DR PANTHER; PTHR11534; PTHR11534; 1.
DR Pfam; PF00010; HLH; 1.
DR SMART; SM00353; HLH; 1.
DR SUPFAM; SSF47459; SSF47459; 1.
DR PROSITE; PS50888; BHLH; 1.
PE 2: Evidence at transcript level;
KW Developmental protein; Differentiation; DNA-binding; Myogenesis; Nucleus;
KW Reference proteome; Transcription; Transcription regulation.
FT CHAIN 1..329
FT /note="Myoblast determination protein 1 homolog"
FT /id="PRO_0000127372"
FT DOMAIN 160..211
FT /note="bHLH"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00981"
FT REGION 256..279
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 329 AA; 36595 MW; 4774896E33266B1C CRC64;
MNQTETSTAP ANAETYDTNI YYTPSPRVTA NDITTLTTFA TPVPQALDYV NTQYNDIYRN
QPATYYLPTY GQPGSSSFYP DFSNFNVART QDFAALPTVA ADIKPIIIKQ EKEVSSGGSN
NNDPTSTDLL GDGVAHSGDE TAPIATLVAG ANAPRRTKLD RRKAATMRER RRLRKVNEAF
EVVKQRTCPN PNQRLPKVEI LRSAIDYINT LERMLTSVGK TTKIMDQNHH LQMTQPISAA
PHDYITSSHF ANAGYNPDGP NVYDDEDLSD TDEDRDHHHH KLGNAIDLRR RNSLDGLARI
VDNIPLLQSQ PEVPNEIPAG SEDKKLEIL