MYRS_OCIBA
ID MYRS_OCIBA Reviewed; 599 AA.
AC Q5SBP1;
DT 05-OCT-2010, integrated into UniProtKB/Swiss-Prot.
DT 21-DEC-2004, sequence version 1.
DT 03-AUG-2022, entry version 56.
DE RecName: Full=Beta-myrcene synthase, chloroplastic;
DE EC=4.2.3.15;
DE Flags: Precursor;
GN Name=MYS;
OS Ocimum basilicum (Sweet basil).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ociminae;
OC Ocimum.
OX NCBI_TaxID=39350;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, AND CATALYTIC ACTIVITY.
RX PubMed=15516500; DOI=10.1104/pp.104.051318;
RA Iijima Y., Davidovich-Rikanati R., Fridman E., Gang D.R., Bar E.,
RA Lewinsohn E., Pichersky E.;
RT "The biochemical and molecular basis for the divergent patterns in the
RT biosynthesis of terpenes and phenylpropenes in the peltate glands of three
RT cultivars of basil.";
RL Plant Physiol. 136:3724-3736(2004).
CC -!- FUNCTION: Monoterpene synthase that catalyzes the formation of beta-
CC myrcene from geranyl diphosphate. {ECO:0000269|PubMed:15516500}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=(2E)-geranyl diphosphate = beta-myrcene + diphosphate;
CC Xref=Rhea:RHEA:16965, ChEBI:CHEBI:17221, ChEBI:CHEBI:33019,
CC ChEBI:CHEBI:58057; EC=4.2.3.15;
CC Evidence={ECO:0000269|PubMed:15516500};
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence={ECO:0000250};
CC Name=Mn(2+); Xref=ChEBI:CHEBI:29035; Evidence={ECO:0000250};
CC Note=Binds 3 Mg(2+) or Mn(2+) ions per subunit. {ECO:0000250};
CC -!- PATHWAY: Secondary metabolite biosynthesis; terpenoid biosynthesis.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast {ECO:0000305}.
CC -!- DOMAIN: The Asp-Asp-Xaa-Xaa-Asp/Glu (DDXXD/E) motif is important for
CC the catalytic activity, presumably through binding to Mg(2+).
CC -!- SIMILARITY: Belongs to the terpene synthase family. {ECO:0000305}.
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DR EMBL; AY693649; AAV63791.1; -; mRNA.
DR AlphaFoldDB; Q5SBP1; -.
DR SMR; Q5SBP1; -.
DR UniPathway; UPA00213; -.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR GO; GO:0000287; F:magnesium ion binding; IEA:InterPro.
DR GO; GO:0050551; F:myrcene synthase activity; IEA:UniProtKB-EC.
DR GO; GO:0016102; P:diterpenoid biosynthetic process; IEA:InterPro.
DR CDD; cd00684; Terpene_cyclase_plant_C1; 1.
DR Gene3D; 1.10.600.10; -; 1.
DR Gene3D; 1.50.10.130; -; 1.
DR InterPro; IPR008949; Isoprenoid_synthase_dom_sf.
DR InterPro; IPR034741; Terpene_cyclase-like_1_C.
DR InterPro; IPR044814; Terpene_cyclase_plant_C1.
DR InterPro; IPR001906; Terpene_synth_N.
DR InterPro; IPR036965; Terpene_synth_N_sf.
DR InterPro; IPR005630; Terpene_synthase_metal-bd.
DR InterPro; IPR008930; Terpenoid_cyclase/PrenylTrfase.
DR Pfam; PF01397; Terpene_synth; 1.
DR Pfam; PF03936; Terpene_synth_C; 1.
DR SFLD; SFLDG01019; Terpene_Cyclase_Like_1_C_Termi; 1.
DR SUPFAM; SSF48239; SSF48239; 1.
DR SUPFAM; SSF48576; SSF48576; 1.
PE 1: Evidence at protein level;
KW Chloroplast; Lyase; Magnesium; Metal-binding; Plastid; Transit peptide.
FT TRANSIT 1..34
FT /note="Chloroplast"
FT /evidence="ECO:0000255"
FT CHAIN 35..599
FT /note="Beta-myrcene synthase, chloroplastic"
FT /id="PRO_0000399254"
FT MOTIF 352..356
FT /note="DDXXD motif"
FT BINDING 352
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="1"
FT /evidence="ECO:0000250"
FT BINDING 352
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="2"
FT /evidence="ECO:0000250"
FT BINDING 356
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="1"
FT /evidence="ECO:0000250"
FT BINDING 356
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="2"
FT /evidence="ECO:0000250"
FT BINDING 496
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="3"
FT /evidence="ECO:0000250"
FT BINDING 500
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="3"
FT /evidence="ECO:0000250"
FT BINDING 504
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="3"
FT /evidence="ECO:0000250"
SQ SEQUENCE 599 AA; 69963 MW; 11C670B014FBDEBD CRC64;
MWSTISISMN VAILKKPLNF LHNSNNKASN PRCVSSTRRR PSCPLQLDVE PRRSGNYQPS
AWDFNYIQSL NNNHSKEERH LERKAKLIEE VKMLLEQEMA AVQQLELIED LKNLGLSYLF
QDEIKIILNS IYNHHKCFHN NHEQCIHVNS DLYFVALGFR LFRQHGFKVS QEVFDCFKNE
EGSDFSANLA DDTKGLLQLY EASYLVTEDE DTLEMARQFS TKILQKKVEE KMIEKENLLS
WTLHSLELPL HWRIQRLEAK WFLDAYASRP DMNPIIFELA KLEFNIAQAL QQEELKDLSR
WWNDTGIAEK LPFARDRIVE SHYWAIGTLE PYQYRYQRSL IAKIIALTTV VDDVYDVYGT
LDELQLFTDA IRRWDIESIN QLPSYMQLCY LAIYNFVSEL AYDIFRDKGF NSLPYLHKSW
LDLVEAYFVE AKWFHDGYTP TLEEYLNNSK ITIICPAIVS EIYFAFANSI DKTEVESIYK
YHDILYLSGM LARLPDDLGT SSFEMKRGDV AKAIQCYMKE HNASEEEARE HIRFLMREAW
KHMNTAAAAD DCPFESDLVV GAASLGRVAN FVYVEGDGFG VQHSKIHQQM AELLFYPYQ