NA102_ARATH
ID NA102_ARATH Reviewed; 312 AA.
AC Q8H115; Q94AR7; Q9FFN5;
DT 26-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2003, sequence version 1.
DT 25-MAY-2022, entry version 103.
DE RecName: Full=NAC domain-containing protein 102;
DE Short=ANAC102;
GN Name=NAC102; OrderedLocusNames=At5g63790; ORFNames=MBK5.27;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9330910; DOI=10.1093/dnares/4.3.215;
RA Sato S., Kotani H., Nakamura Y., Kaneko T., Asamizu E., Fukami M.,
RA Miyajima N., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. I. Sequence
RT features of the 1.6 Mb regions covered by twenty physically assigned P1
RT clones.";
RL DNA Res. 4:215-230(1997).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 9-312.
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=15029955; DOI=10.1093/dnares/10.6.239;
RA Ooka H., Satoh K., Doi K., Nagata T., Otomo Y., Murakami K., Matsubara K.,
RA Osato N., Kawai J., Carninci P., Hayashizaki Y., Suzuki K., Kojima K.,
RA Takahara Y., Yamamoto K., Kikuchi S.;
RT "Comprehensive analysis of NAC family genes in Oryza sativa and Arabidopsis
RT thaliana.";
RL DNA Res. 10:239-247(2003).
RN [6]
RP FUNCTION, DISRUPTION PHENOTYPE, TISSUE SPECIFICITY, AND INDUCTION.
RX PubMed=19176720; DOI=10.1104/pp.108.131912;
RA Christianson J.A., Wilson I.W., Llewellyn D.J., Dennis E.S.;
RT "The low-oxygen-induced NAC domain transcription factor ANAC102 affects
RT viability of Arabidopsis seeds following low-oxygen treatment.";
RL Plant Physiol. 149:1724-1738(2009).
CC -!- FUNCTION: May be involved in regulation of seed germination under
CC flooding. {ECO:0000269|PubMed:19176720}.
CC -!- INTERACTION:
CC Q8H115; Q9FY93: NAC083; NbExp=2; IntAct=EBI-1998655, EBI-4453280;
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- TISSUE SPECIFICITY: Expressed in root cortex, root caps and sepals. Not
CC detected in imbibed seeds. {ECO:0000269|PubMed:19176720}.
CC -!- INDUCTION: By low-oxygen stress. {ECO:0000269|PubMed:19176720}.
CC -!- DOMAIN: The NAC domain includes a DNA-binding domain and a dimerization
CC domain.
CC -!- DISRUPTION PHENOTYPE: No visible changes in phenotype.
CC {ECO:0000269|PubMed:19176720}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAB10472.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; AB005234; BAB10472.1; ALT_INIT; Genomic_DNA.
DR EMBL; CP002688; AED97798.1; -; Genomic_DNA.
DR EMBL; BT000896; AAN41296.1; -; mRNA.
DR EMBL; AY045843; AAK76517.2; -; mRNA.
DR EMBL; AY088431; AAM65967.1; -; mRNA.
DR RefSeq; NP_201184.2; NM_125774.3.
DR AlphaFoldDB; Q8H115; -.
DR SMR; Q8H115; -.
DR BioGRID; 21741; 5.
DR IntAct; Q8H115; 5.
DR STRING; 3702.AT5G63790.1; -.
DR PaxDb; Q8H115; -.
DR ProteomicsDB; 251195; -.
DR EnsemblPlants; AT5G63790.1; AT5G63790.1; AT5G63790.
DR GeneID; 836499; -.
DR Gramene; AT5G63790.1; AT5G63790.1; AT5G63790.
DR KEGG; ath:AT5G63790; -.
DR Araport; AT5G63790; -.
DR TAIR; locus:2160634; AT5G63790.
DR eggNOG; ENOG502QW8W; Eukaryota.
DR HOGENOM; CLU_035664_3_1_1; -.
DR InParanoid; Q8H115; -.
DR PhylomeDB; Q8H115; -.
DR PRO; PR:Q8H115; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q8H115; baseline and differential.
DR Genevisible; Q8H115; AT.
DR GO; GO:0009507; C:chloroplast; IDA:TAIR.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR GO; GO:0000976; F:transcription cis-regulatory region binding; IPI:TAIR.
DR GO; GO:0071456; P:cellular response to hypoxia; HEP:TAIR.
DR GO; GO:0019760; P:glucosinolate metabolic process; IMP:TAIR.
DR GO; GO:0001666; P:response to hypoxia; IMP:TAIR.
DR Gene3D; 2.170.150.80; -; 1.
DR InterPro; IPR003441; NAC-dom.
DR InterPro; IPR036093; NAC_dom_sf.
DR Pfam; PF02365; NAM; 1.
DR SUPFAM; SSF101941; SSF101941; 1.
DR PROSITE; PS51005; NAC; 1.
PE 1: Evidence at protein level;
KW DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..312
FT /note="NAC domain-containing protein 102"
FT /id="PRO_0000376619"
FT DOMAIN 50..202
FT /note="NAC"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00353"
FT DNA_BIND 146..208
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00353"
FT CONFLICT 93
FT /note="W -> R (in Ref. 3; AAK76517)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 312 AA; 35999 MW; 7AD2E74A2D750A53 CRC64;
MDFALFSSIS IFEINHKDPP IRRFIKTQNR ILSTRKQQGT FPKMKAELNL PAGFRFHPTD
EELVKFYLCR RCASEPINVP VIAEIDLYKF NPWELPEMAL YGEKEWYFFS HRDRKYPNGS
RPNRAAGTGY WKATGADKPI GKPKTLGIKK ALVFYAGKAP KGIKTNWIMH EYRLANVDRS
ASTNKKNNLR LDDWVLCRIY NKKGTMEKYL PAAAEKPTEK MSTSDSRCSS HVISPDVTCS
DNWEVESEPK WINLEDALEA FNDDTSMFSS IGLLQNDAFV PQFQYQSSDF VDSFQDPFEQ
KPFLNWNFAP QG
