NAC3_ARATH
ID NAC3_ARATH Reviewed; 394 AA.
AC Q5PP28; O81912;
DT 16-JUN-2009, integrated into UniProtKB/Swiss-Prot.
DT 04-JAN-2005, sequence version 1.
DT 03-AUG-2022, entry version 97.
DE RecName: Full=NAC domain-containing protein 3;
DE Short=ANAC003;
GN Name=NAC003; OrderedLocusNames=At1g02220; ORFNames=T7I23.18;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Kim C.J., Chen H., Cheuk R.F., Shinn P., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (MAY-2005) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Fujita M., Mizukado S., Seki M., Shinozaki K., Mitsuda N., Takiguchi Y.,
RA Takagi M.;
RT "ORF cloning and analysis of Arabidopsis transcription factor genes.";
RL Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=15029955; DOI=10.1093/dnares/10.6.239;
RA Ooka H., Satoh K., Doi K., Nagata T., Otomo Y., Murakami K., Matsubara K.,
RA Osato N., Kawai J., Carninci P., Hayashizaki Y., Suzuki K., Kojima K.,
RA Takahara Y., Yamamoto K., Kikuchi S.;
RT "Comprehensive analysis of NAC family genes in Oryza sativa and Arabidopsis
RT thaliana.";
RL DNA Res. 10:239-247(2003).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- DOMAIN: The NAC domain includes a DNA-binding domain and a dimerization
CC domain.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAC24382.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; U89959; AAC24382.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002684; AEE27404.1; -; Genomic_DNA.
DR EMBL; BT020269; AAV84490.1; -; mRNA.
DR EMBL; BT022063; AAY25475.1; -; mRNA.
DR EMBL; AB493423; BAH30261.1; -; mRNA.
DR RefSeq; NP_171725.1; NM_100103.3.
DR AlphaFoldDB; Q5PP28; -.
DR SMR; Q5PP28; -.
DR BioGRID; 24711; 4.
DR IntAct; Q5PP28; 4.
DR STRING; 3702.AT1G02220.1; -.
DR iPTMnet; Q5PP28; -.
DR PaxDb; Q5PP28; -.
DR PRIDE; Q5PP28; -.
DR EnsemblPlants; AT1G02220.1; AT1G02220.1; AT1G02220.
DR GeneID; 839476; -.
DR Gramene; AT1G02220.1; AT1G02220.1; AT1G02220.
DR KEGG; ath:AT1G02220; -.
DR Araport; AT1G02220; -.
DR TAIR; locus:2204833; AT1G02220.
DR HOGENOM; CLU_035664_9_3_1; -.
DR InParanoid; Q5PP28; -.
DR OMA; EIVGHYV; -.
DR OrthoDB; 1092141at2759; -.
DR PhylomeDB; Q5PP28; -.
DR PRO; PR:Q5PP28; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q5PP28; baseline and differential.
DR Genevisible; Q5PP28; AT.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0005886; C:plasma membrane; IDA:TAIR.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR GO; GO:0000976; F:transcription cis-regulatory region binding; IPI:TAIR.
DR Gene3D; 2.170.150.80; -; 1.
DR InterPro; IPR003441; NAC-dom.
DR InterPro; IPR036093; NAC_dom_sf.
DR Pfam; PF02365; NAM; 1.
DR SUPFAM; SSF101941; SSF101941; 1.
DR PROSITE; PS51005; NAC; 1.
PE 2: Evidence at transcript level;
KW DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..394
FT /note="NAC domain-containing protein 3"
FT /id="PRO_0000376611"
FT DOMAIN 3..147
FT /note="NAC"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00353"
FT DNA_BIND 104..153
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00353"
FT REGION 152..173
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 264..300
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 281..300
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 394 AA; 45153 MW; 8F9B26A7AD33F732 CRC64;
METPVGLRFC PTDEEIVVDY LWPKNSDRDT SHVDRFINTV PVCRLDPWEL PCQSRIKLKD
VAWCFFRPKE NKYGRGDQQM RKTKSGFWKS TGRPKPIMRN RQQIGEKKIL MFYTSKESKS
DWVIHEYHGF SHNQMMMTYT LCKVMFNGGM REKSSSSPSS SGVSGIEQSR RDSLIPQLVN
NSEGSSLHRE DPSQFGDVLQ EAPIEDAKLT EELVKWLMND EDDAQIEDAI PIEEWETWLN
DIDDAKEKSI MFMHDNRSDY RPPNSLTGVF SDDVSSDDND SDLLTPKTNS IQTSSTCDSF
GSSNHRIDQI KDLQESPTST INLVSLTQEV SQALITSIDT AEKKKNPYDD AQGTEIGEHK
LGQETIKKKR AGFFHRMIQK FVKKIHLCSS ISRT