NAC41_ARATH
ID NAC41_ARATH Reviewed; 268 AA.
AC O22798;
DT 24-JUN-2015, integrated into UniProtKB/Swiss-Prot.
DT 01-JAN-1998, sequence version 1.
DT 25-MAY-2022, entry version 135.
DE RecName: Full=NAC domain-containing protein 41 {ECO:0000303|PubMed:15029955};
DE Short=ANAC041 {ECO:0000303|PubMed:15029955};
GN Name=NAC041 {ECO:0000303|PubMed:15029955};
GN OrderedLocusNames=At2g33480 {ECO:0000312|Araport:AT2G33480};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=15029955; DOI=10.1093/dnares/10.6.239;
RA Ooka H., Satoh K., Doi K., Nagata T., Otomo Y., Murakami K., Matsubara K.,
RA Osato N., Kawai J., Carninci P., Hayashizaki Y., Suzuki K., Kojima K.,
RA Takahara Y., Yamamoto K., Kikuchi S.;
RT "Comprehensive analysis of NAC family genes in Oryza sativa and Arabidopsis
RT thaliana.";
RL DNA Res. 10:239-247(2003).
RN [5]
RP FUNCTION, AND DISRUPTION PHENOTYPE.
RX PubMed=24243147; DOI=10.1007/s11103-013-0154-9;
RA Kim W.C., Reca I.B., Kim Y., Park S., Thomashow M.F., Keegstra K.,
RA Han K.H.;
RT "Transcription factors that directly regulate the expression of CSLA9
RT encoding mannan synthase in Arabidopsis thaliana.";
RL Plant Mol. Biol. 84:577-587(2014).
CC -!- FUNCTION: Transcription activator of the mannan synthase CSLA9.
CC Recognizes and binds to DNA-specific sequence of CSLA9 promoter.
CC {ECO:0000269|PubMed:24243147}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00353}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=1;
CC Comment=A number of isoforms are produced. According to EST
CC sequences. {ECO:0000305};
CC Name=1;
CC IsoId=O22798-1; Sequence=Displayed;
CC -!- DOMAIN: The NAC domain includes a DNA binding domain and a dimerization
CC domain. {ECO:0000255|PROSITE-ProRule:PRU00353}.
CC -!- DISRUPTION PHENOTYPE: No visible phenotype under normal growth
CC conditions. {ECO:0000269|PubMed:24243147}.
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DR EMBL; AC002332; AAB80665.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC08840.1; -; Genomic_DNA.
DR EMBL; AF325080; AAK17148.1; -; mRNA.
DR EMBL; AF410299; AAK95285.1; -; mRNA.
DR EMBL; AY093730; AAM10354.1; -; mRNA.
DR PIR; A84746; A84746.
DR RefSeq; NP_180906.1; NM_128908.5. [O22798-1]
DR AlphaFoldDB; O22798; -.
DR SMR; O22798; -.
DR IntAct; O22798; 10.
DR STRING; 3702.AT2G33480.1; -.
DR PaxDb; O22798; -.
DR PRIDE; O22798; -.
DR ProteomicsDB; 251193; -. [O22798-1]
DR EnsemblPlants; AT2G33480.1; AT2G33480.1; AT2G33480. [O22798-1]
DR GeneID; 817913; -.
DR Gramene; AT2G33480.1; AT2G33480.1; AT2G33480. [O22798-1]
DR KEGG; ath:AT2G33480; -.
DR Araport; AT2G33480; -.
DR TAIR; locus:2051053; AT2G33480.
DR eggNOG; ENOG502R7WC; Eukaryota.
DR InParanoid; O22798; -.
DR OMA; HENKFCL; -.
DR PhylomeDB; O22798; -.
DR PRO; PR:O22798; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; O22798; baseline and differential.
DR Genevisible; O22798; AT.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IDA:UniProtKB.
DR GO; GO:0000976; F:transcription cis-regulatory region binding; IPI:TAIR.
DR Gene3D; 2.170.150.80; -; 1.
DR InterPro; IPR003441; NAC-dom.
DR InterPro; IPR036093; NAC_dom_sf.
DR Pfam; PF02365; NAM; 1.
DR SUPFAM; SSF101941; SSF101941; 1.
DR PROSITE; PS51005; NAC; 1.
PE 2: Evidence at transcript level;
KW Activator; Alternative splicing; DNA-binding; Nucleus; Reference proteome;
KW Transcription; Transcription regulation.
FT CHAIN 1..268
FT /note="NAC domain-containing protein 41"
FT /id="PRO_0000433239"
FT DOMAIN 15..160
FT /note="NAC"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00353"
FT DNA_BIND 109..166
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00353"
FT REGION 166..190
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 268 AA; 31124 MW; 02F34981BA78C336 CRC64;
MEKRSSIKNR GVLRLPPGFR FHPTDEELVV QYLRRKVTGL PLPASVIPET DVCKSDPWDL
PGDCESEMYF FSTREAKYPN GNRSNRSTGS GYWKATGLDK QIGKKKLVVG MKKTLVFYKG
KPPNGTRTNW VLHEYRLVDS QQDSLYGQNM NWVLCRVFLK KRSNSNSKRK EDEKEEVENE
KETETERERE EENKKSTCPI FYDFMRKDTK KKRRRRRCCD LNLTPATCCC CSSSTSSSSV
CSSALTHTSS NDNRQEISYR ENKFCLFL
