ID   NAC58_ORYSJ             Reviewed;         392 AA.
AC   Q8H7M1; Q0DS77;
DT   03-AUG-2022, integrated into UniProtKB/Swiss-Prot.
DT   01-MAR-2003, sequence version 1.
DT   03-AUG-2022, entry version 117.
DE   RecName: Full=NAC domain-containing protein 58 {ECO:0000303|PubMed:18813954};
DE            Short=ONAC058 {ECO:0000303|PubMed:18813954};
DE   AltName: Full=Protein NAC-LIKE, ACTIVATED BY AP3/PI homolog {ECO:0000305};
DE            Short=OsNAP {ECO:0000303|PubMed:24028154};
DE   AltName: Full=Protein PREMATURELY SENILE 1 {ECO:0000303|PubMed:24951508};
GN   Name=NAC58 {ECO:0000303|PubMed:18813954};
GN   Synonyms=NAP {ECO:0000303|PubMed:24028154};
GN   OrderedLocusNames=Os03g0327800 {ECO:0000312|EMBL:BAS84005.1},
GN   LOC_Os03g21060 {ECO:0000312|EMBL:ABF95729.1};
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA].
RA   Park S., Kim B.-G., Ahn I.-P., Woo H.-J., Kim S.-T., Bae S.C.;
RT   "Characterization of OsNACs gene induced by Xanthomonas oryzae pv.
RT   oryzae.";
RL   Submitted (NOV-2011) to the EMBL/GenBank/DDBJ databases.
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16109971; DOI=10.1101/gr.3869505;
RG   The rice chromosome 3 sequencing consortium;
RA   Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B.,
RA   Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T.,
RA   Fadrosh D., Bera J., Weaver B., Jin S., Johri S., Reardon M., Webb K.,
RA   Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T.,
RA   Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R.,
RA   Salzberg S.L., White O., Fraser C.M., Yu Y., Kim H., Rambo T., Currie J.,
RA   Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S.S.,
RA   Luo M., Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M.,
RA   Pries G., Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M.,
RA   Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L.,
RA   O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R.,
RA   Jin W., Lee H.R., Jiang J., Jackson S.;
RT   "Sequence, annotation, and analysis of synteny between rice chromosome 3
RT   and diverged grass species.";
RL   Genome Res. 15:1284-1291(2005).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [4]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=18089549; DOI=10.1093/nar/gkm978;
RG   The rice annotation project (RAP);
RT   "The rice annotation project database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [5]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [6]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Nipponbare;
RG   The rice full-length cDNA consortium;
RT   "Oryza sativa full length cDNA.";
RL   Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
RN   [7]
RP   GENE FAMILY, AND NOMENCLATURE.
RX   PubMed=18813954; DOI=10.1007/s00438-008-0386-6;
RA   Fang Y., You J., Xie K., Xie W., Xiong L.;
RT   "Systematic sequence analysis and identification of tissue-specific or
RT   stress-responsive genes of NAC transcription factor family in rice.";
RL   Mol. Genet. Genomics 280:547-563(2008).
RN   [8]
RP   FUNCTION, SUBCELLULAR LOCATION, TISSUE SPECIFICITY, AND INDUCTION.
RX   PubMed=24028154; DOI=10.1186/1471-2229-13-132;
RA   Zhou Y., Huang W., Liu L., Chen T., Zhou F., Lin Y.;
RT   "Identification and functional characterization of a rice NAC gene involved
RT   in the regulation of leaf senescence.";
RL   BMC Plant Biol. 13:132-132(2013).
RN   [9]
RP   FUNCTION, SUBCELLULAR LOCATION, TISSUE SPECIFICITY, AND INDUCTION.
RX   PubMed=24399239; DOI=10.1093/pcp/pct204;
RA   Chen X., Wang Y., Lv B., Li J., Luo L., Lu S., Zhang X., Ma H., Ming F.;
RT   "The NAC family transcription factor OsNAP confers abiotic stress response
RT   through the ABA pathway.";
RL   Plant Cell Physiol. 55:604-619(2014).
RN   [10]
RP   FUNCTION, TISSUE SPECIFICITY, AND INDUCTION.
RX   PubMed=24951508; DOI=10.1073/pnas.1321568111;
RA   Liang C., Wang Y., Zhu Y., Tang J., Hu B., Liu L., Ou S., Wu H., Sun X.,
RA   Chu J., Chu C.;
RT   "OsNAP connects abscisic acid and leaf senescence by fine-tuning abscisic
RT   acid biosynthesis and directly targeting senescence-associated genes in
RT   rice.";
RL   Proc. Natl. Acad. Sci. U.S.A. 111:10013-10018(2014).
CC   -!- FUNCTION: Transcription factor that acts as a positive regulator of the
CC       jasmonate (JA) pathway to mediate leaf senescence (PubMed:24028154).
CC       May directly regulate LOX2, AOC, AOS2, AOC1 and OPR7, which are genes
CC       involved in the biosynthesis of JA (PubMed:24028154). Regulates
CC       positively leaf senescence by directly targeting senescence-associated
CC       genes (SAGs) related to chlorophyll degradation, nutrient transport and
CC       other genes associated with abscisic acid-induced leaf senescence
CC       (PubMed:24951508). Transcription activator that plays a role in
CC       mediating abiotic stress responses through the abscisic acid (ABA)
CC       pathway (PubMed:24399239). Possesses transcriptional activator activity
CC       in yeast (PubMed:24399239). {ECO:0000269|PubMed:24028154,
CC       ECO:0000269|PubMed:24399239, ECO:0000269|PubMed:24951508}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00353,
CC       ECO:0000269|PubMed:24028154, ECO:0000269|PubMed:24399239}.
CC   -!- TISSUE SPECIFICITY: Expressed in leaves, nodes, internodes and mature
CC       seeds (PubMed:24028154). Highly expressed in roots (PubMed:24399239).
CC       Expressed in leaf sheaths, flag leaves and inflorescences
CC       (PubMed:24399239). Expressed in primary and lateral roots, particularly
CC       in the vascular tissues (PubMed:24951508). Expressed in the primary
CC       phloem of the culm and leaf sheaths (PubMed:24951508). Expressed
CC       principally in the primary phloem and in the peripheral zone of the
CC       leaf vascular bundles (PubMed:24951508). Expressed in the floral
CC       tissues (PubMed:24951508). {ECO:0000269|PubMed:24028154,
CC       ECO:0000269|PubMed:24399239, ECO:0000269|PubMed:24951508}.
CC   -!- INDUCTION: Up-regulated during leaf senescence (PubMed:24028154,
CC       PubMed:24951508). Induced by treatment with methyl jasmonate (MeJa)
CC       (PubMed:24028154). Induced by salt stress, cold stress, osmotic stress
CC       and treatment with hydrogen peroxide (PubMed:24399239). Induced by
CC       treatment with abscisic acid (ABA) (PubMed:24399239, PubMed:24951508).
CC       {ECO:0000269|PubMed:24028154, ECO:0000269|PubMed:24399239,
CC       ECO:0000269|PubMed:24951508}.
CC   -!- DOMAIN: The NAC domain includes a DNA binding domain and a dimerization
CC       domain. {ECO:0000255|PROSITE-ProRule:PRU00353}.
CC   -!- MISCELLANEOUS: Plants overexpressing NAC58 display an accelerated leaf
CC       senescence phenotype at the grain-filling stage (PubMed:24028154,
CC       PubMed:24951508). The gain-of-function mutant plants ps1-D (T-DNA
CC       activation tagging) exhibit premature leaf senescence phenotype
CC       (PubMed:24951508). Plants silencing NAC58 exhibit delayed leaf
CC       senescence and an extended grain-filling period, resulting in
CC       significant increase in the grain yield (PubMed:24951508). Plants
CC       overexpressing NAC58 exhibit a significantly reduced rate of water
CC       loss, enhanced tolerance to high salinity, drought and low temperature
CC       at the vegetative stage, and improved yield under drought stress at the
CC       flowering stage (PubMed:24399239). {ECO:0000269|PubMed:24028154,
CC       ECO:0000269|PubMed:24399239, ECO:0000269|PubMed:24951508}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=BAF11911.2; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; JN982313; AFL91795.1; -; mRNA.
DR   EMBL; DP000009; ABF95729.1; -; Genomic_DNA.
DR   EMBL; AP008209; BAF11911.2; ALT_SEQ; Genomic_DNA.
DR   EMBL; AP014959; BAS84005.1; -; Genomic_DNA.
DR   EMBL; AK243514; BAH01634.1; -; mRNA.
DR   RefSeq; XP_015632401.1; XM_015776915.1.
DR   SMR; Q8H7M1; -.
DR   STRING; 39947.Q8H7M1; -.
DR   PRIDE; Q8H7M1; -.
DR   EnsemblPlants; Os03t0327800-01; Os03t0327800-01; Os03g0327800.
DR   GeneID; 4332717; -.
DR   Gramene; Os03t0327800-01; Os03t0327800-01; Os03g0327800.
DR   KEGG; osa:4332717; -.
DR   eggNOG; ENOG502QSIY; Eukaryota.
DR   HOGENOM; CLU_035664_8_3_1; -.
DR   InParanoid; Q0DS77; -.
DR   OMA; MQKIPSI; -.
DR   OrthoDB; 1179931at2759; -.
DR   Proteomes; UP000000763; Chromosome 3.
DR   Proteomes; UP000059680; Chromosome 3.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
DR   Gene3D; 2.170.150.80; -; 1.
DR   InterPro; IPR003441; NAC-dom.
DR   InterPro; IPR036093; NAC_dom_sf.
DR   Pfam; PF02365; NAM; 1.
DR   SUPFAM; SSF101941; SSF101941; 1.
DR   PROSITE; PS51005; NAC; 1.
PE   2: Evidence at transcript level;
KW   Abscisic acid signaling pathway; DNA-binding;
KW   Jasmonic acid signaling pathway; Nucleus; Reference proteome;
KW   Transcription; Transcription regulation.
FT   CHAIN           1..392
FT                   /note="NAC domain-containing protein 58"
FT                   /id="PRO_0000456288"
FT   DOMAIN          9..173
FT                   /note="NAC"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00353"
SQ   SEQUENCE   392 AA;  42196 MW;  310FE03ACFA00094 CRC64;
     MVLSNPAMLP PGFRFHPTDE ELIVHYLRNR AASSPCPVSI IADVDIYKFD PWDLPSKENY
     GDREWYFFSP RDRKYPNGIR PNRAAGSGYW KATGTDKPIH SSGGAATNES VGVKKALVFY
     KGRPPKGTKT NWIMHEYRLA AADAHAANTY RPMKFRNTSM RLDDWVLCRI YKKSSHASPL
     AVPPLSDHEQ DEPCALEENA PLYAPSSSSA ASMILQGAAA GAFPSLHAAA AATQRTAMQK
     IPSISDLLNE YSLSQLFDDG GAAAAAPLQE MARQPDHHHH QQQQHALFGH PVMNHFIANN
     SMVQLAHLDP SSSAAASTSA GAVVEPPAVT GKRKRSSDGG EPTIQALPPA AAAAKKPNGS
     CVGATFQIGS ALQGSSLGLS HQMLLHSNMG MN