NAC68_ORYSJ
ID NAC68_ORYSJ Reviewed; 318 AA.
AC Q52QH4; Q0JI97; Q7F353; Q9MBC6;
DT 20-DEC-2005, integrated into UniProtKB/Swiss-Prot.
DT 24-MAY-2005, sequence version 1.
DT 03-AUG-2022, entry version 94.
DE RecName: Full=NAC domain-containing protein 68 {ECO:0000303|PubMed:15029955};
DE Short=ONAC068 {ECO:0000303|PubMed:15029955};
DE AltName: Full=OsNAC4 {ECO:0000303|PubMed:10660065};
GN Name=NAC068 {ECO:0000303|PubMed:15029955};
GN Synonyms=NAC4 {ECO:0000303|PubMed:10660065};
GN OrderedLocusNames=Os01g0816100 {ECO:0000312|EMBL:BAS74921.1},
GN LOC_Os01g60020 {ECO:0000305};
GN ORFNames=B1148D12.1 {ECO:0000312|EMBL:BAB64820.1},
GN OSJNBa0085D07.44 {ECO:0000312|EMBL:BAD82705.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], AND TISSUE SPECIFICITY.
RX PubMed=10660065; DOI=10.1007/pl00008647;
RA Kikuchi K., Ueguchi-Tanaka M., Yoshida K.T., Nagato Y., Matsusoka M.,
RA Hirano H.-Y.;
RT "Molecular analysis of the NAC gene family in rice.";
RL Mol. Gen. Genet. 262:1047-1051(2000).
RN [2]
RP NUCLEOTIDE SEQUENCE [MRNA].
RA Lin R.-M., Zhao W.-S., Meng X.-B., Peng Y.-L.;
RT "Molecular cloning and expression of a Magnaporthe grisea induced cDNA
RT encoding a NAC protein.";
RL Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12447438; DOI=10.1038/nature01184;
RA Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y.,
RA Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H.,
RA Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M.,
RA Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M.,
RA Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T.,
RA Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S.,
RA Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H.,
RA Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y.,
RA Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S.,
RA Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y.,
RA Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S.,
RA Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H.,
RA Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T.;
RT "The genome sequence and structure of rice chromosome 1.";
RL Nature 420:312-316(2002).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [6]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [7]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [8]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=15029955; DOI=10.1093/dnares/10.6.239;
RA Ooka H., Satoh K., Doi K., Nagata T., Otomo Y., Murakami K., Matsubara K.,
RA Osato N., Kawai J., Carninci P., Hayashizaki Y., Suzuki K., Kojima K.,
RA Takahara Y., Yamamoto K., Kikuchi S.;
RT "Comprehensive analysis of NAC family genes in Oryza sativa and Arabidopsis
RT thaliana.";
RL DNA Res. 10:239-247(2003).
RN [9]
RP INDUCTION BY SALT STRESS.
RX PubMed=18813954; DOI=10.1007/s00438-008-0386-6;
RA Fang Y., You J., Xie K., Xie W., Xiong L.;
RT "Systematic sequence analysis and identification of tissue-specific or
RT stress-responsive genes of NAC transcription factor family in rice.";
RL Mol. Genet. Genomics 280:547-563(2008).
RN [10]
RP INDUCTION.
RX PubMed=20632034; DOI=10.1007/s00438-010-0557-0;
RA Takasaki H., Maruyama K., Kidokoro S., Ito Y., Fujita Y., Shinozaki K.,
RA Yamaguchi-Shinozaki K., Nakashima K.;
RT "The abiotic stress-responsive NAC-type transcription factor OsNAC5
RT regulates stress-inducible genes and stress tolerance in rice.";
RL Mol. Genet. Genomics 284:173-183(2010).
CC -!- FUNCTION: Probable transcription factor involved in stress response.
CC {ECO:0000250|UniProtKB:Q7F2L3}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00353}.
CC -!- TISSUE SPECIFICITY: Expressed in stems, leaf blades and callus. Weakly
CC expressed in developing flowers. {ECO:0000269|PubMed:10660065}.
CC -!- INDUCTION: Induced by salt stress (PubMed:18813954, PubMed:20632034).
CC Induced by dehydration, cold stress and methyl jasmonate
CC (PubMed:20632034). {ECO:0000269|PubMed:18813954,
CC ECO:0000269|PubMed:20632034}.
CC -!- DOMAIN: The NAC domain includes a DNA binding domain and a dimerization
CC domain. {ECO:0000255|PROSITE-ProRule:PRU00353}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAA89798.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
CC Sequence=BAB64820.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
CC Sequence=BAD82705.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
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DR EMBL; AB028183; BAA89798.1; ALT_INIT; mRNA.
DR EMBL; AY986504; AAX85684.1; -; mRNA.
DR EMBL; AP003411; BAB64820.1; ALT_INIT; Genomic_DNA.
DR EMBL; AP004331; BAD82705.1; ALT_INIT; Genomic_DNA.
DR EMBL; AP008207; BAF06531.1; -; Genomic_DNA.
DR EMBL; AP014957; BAS74921.1; -; Genomic_DNA.
DR EMBL; AK073848; -; NOT_ANNOTATED_CDS; mRNA.
DR RefSeq; XP_015623706.1; XM_015768220.1.
DR AlphaFoldDB; Q52QH4; -.
DR SMR; Q52QH4; -.
DR STRING; 4530.OS01T0816100-01; -.
DR PaxDb; Q52QH4; -.
DR PRIDE; Q52QH4; -.
DR EnsemblPlants; Os01t0816100-01; Os01t0816100-01; Os01g0816100.
DR GeneID; 4327485; -.
DR Gramene; Os01t0816100-01; Os01t0816100-01; Os01g0816100.
DR KEGG; osa:4327485; -.
DR eggNOG; ENOG502QRBC; Eukaryota.
DR HOGENOM; CLU_035664_5_2_1; -.
DR InParanoid; Q52QH4; -.
DR OMA; HYLCRRV; -.
DR OrthoDB; 976313at2759; -.
DR PlantReactome; R-OSA-6788019; Salicylic acid signaling.
DR Proteomes; UP000000763; Chromosome 1.
DR Proteomes; UP000059680; Chromosome 1.
DR Genevisible; Q52QH4; OS.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
DR Gene3D; 2.170.150.80; -; 1.
DR InterPro; IPR003441; NAC-dom.
DR InterPro; IPR036093; NAC_dom_sf.
DR Pfam; PF02365; NAM; 1.
DR SUPFAM; SSF101941; SSF101941; 1.
DR PROSITE; PS51005; NAC; 1.
PE 2: Evidence at transcript level;
KW DNA-binding; Nucleus; Reference proteome; Stress response; Transcription;
KW Transcription regulation.
FT CHAIN 1..318
FT /note="NAC domain-containing protein 68"
FT /id="PRO_0000132319"
FT DOMAIN 21..175
FT /note="NAC"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00353"
FT CONFLICT 166
FT /note="E -> G (in Ref. 7; AK073848)"
FT /evidence="ECO:0000305"
FT CONFLICT 306
FT /note="P -> R (in Ref. 7; AK073848)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 318 AA; 35347 MW; 8371356B110F2E94 CRC64;
MEMAAAVGGS GRRDAEAELN LPPGFRFHPT DEELVVHYLC RKVARQPLPV PIIAEVDLYK
LDPWDLPEKA LFGRKEWYFF TPRDRKYPNG SRPNRAAGRG YWKATGADKP VAPKGSARTV
GIKKALVFYS GKAPRGVKTD WIMHEYRLAD ADRAPGGKKG SQKLDEWVLC RLYNKKNNWE
KVKLEQQDVA SVAAAAPRNH HHQNGEVMDA AAADTMSDSF QTHDSDIDNA SAGLRHGGCG
GGGFGDVAPP RNGFVTVKED NDWFTGLNFD ELQPPYMMNL QHMQMQMVNP AAPGHDGGYL
QSISSPQMKM WQTILPPF
