NAC77_ORYSJ
ID NAC77_ORYSJ Reviewed; 396 AA.
AC Q5CD17; A0A0P0Y6D2; Q2QYD4;
DT 20-DEC-2005, integrated into UniProtKB/Swiss-Prot.
DT 20-DEC-2005, sequence version 2.
DT 03-AUG-2022, entry version 97.
DE RecName: Full=NAC domain-containing protein 77 {ECO:0000303|PubMed:15029955};
DE Short=ONAC077 {ECO:0000303|PubMed:15029955};
DE AltName: Full=NAC domain-containing protein 300 {ECO:0000303|PubMed:15654622};
DE Short=ONAC300 {ECO:0000303|PubMed:15654622};
GN Name=NAC077 {ECO:0000303|PubMed:15029955};
GN Synonyms=NAC300 {ECO:0000303|PubMed:15654622};
GN OrderedLocusNames=Os12g0123800 {ECO:0000312|EMBL:BAT15672.1},
GN LOC_Os12g03050 {ECO:0000312|EMBL:ABA95706.1};
GN ORFNames=OsJ_35059 {ECO:0000312|EMBL:EAZ19493.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY, AND DEVELOPMENTAL STAGE.
RC STRAIN=cv. Nipponbare; TISSUE=Phloem;
RX PubMed=15654622; DOI=10.1007/s00438-004-1097-2;
RA Kusano H., Asano T., Shimada H., Kadowaki K.;
RT "Molecular characterization of ONAC300, a novel NAC gene specifically
RT expressed at early stages in various developing tissues of rice.";
RL Mol. Genet. Genomics 272:616-626(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16188032; DOI=10.1186/1741-7007-3-20;
RG The rice chromosomes 11 and 12 sequencing consortia;
RT "The sequence of rice chromosomes 11 and 12, rich in disease resistance
RT genes and recent gene duplications.";
RL BMC Biol. 3:20-20(2005).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [7]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=15029955; DOI=10.1093/dnares/10.6.239;
RA Ooka H., Satoh K., Doi K., Nagata T., Otomo Y., Murakami K., Matsubara K.,
RA Osato N., Kawai J., Carninci P., Hayashizaki Y., Suzuki K., Kojima K.,
RA Takahara Y., Yamamoto K., Kikuchi S.;
RT "Comprehensive analysis of NAC family genes in Oryza sativa and Arabidopsis
RT thaliana.";
RL DNA Res. 10:239-247(2003).
RN [8]
RP FUNCTION, AND INDUCTION.
RX PubMed=18813954; DOI=10.1007/s00438-008-0386-6;
RA Fang Y., You J., Xie K., Xie W., Xiong L.;
RT "Systematic sequence analysis and identification of tissue-specific or
RT stress-responsive genes of NAC transcription factor family in rice.";
RL Mol. Genet. Genomics 280:547-563(2008).
CC -!- FUNCTION: Probable transcription factor involved in stress response (By
CC similarity). Binds to DNA-specific sequences of CLPD1 and OAT promoters
CC in vitro (PubMed:18813954). {ECO:0000250|UniProtKB:Q7F2L3,
CC ECO:0000269|PubMed:18813954}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00353}.
CC -!- TISSUE SPECIFICITY: Expressed in phloem. {ECO:0000269|PubMed:15654622}.
CC -!- DEVELOPMENTAL STAGE: Predominantly expressed in developing vascular
CC tissue of the leaves and roots, and in developing flowers.
CC {ECO:0000269|PubMed:15654622}.
CC -!- INDUCTION: Induced by salt and cold stresses.
CC {ECO:0000269|PubMed:18813954}.
CC -!- DOMAIN: The NAC domain includes a DNA binding domain and a dimerization
CC domain. {ECO:0000255|PROSITE-ProRule:PRU00353}.
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DR EMBL; AB182278; BAD91001.1; -; mRNA.
DR EMBL; DP000011; ABA95706.1; -; Genomic_DNA.
DR EMBL; AP008218; BAF29054.1; -; Genomic_DNA.
DR EMBL; AP014968; BAT15672.1; -; Genomic_DNA.
DR EMBL; CM000149; EAZ19493.1; -; Genomic_DNA.
DR RefSeq; XP_015620530.1; XM_015765044.1.
DR AlphaFoldDB; Q5CD17; -.
DR SMR; Q5CD17; -.
DR STRING; 4530.OS12T0123800-01; -.
DR PaxDb; Q5CD17; -.
DR PRIDE; Q5CD17; -.
DR EnsemblPlants; Os12t0123800-01; Os12t0123800-01; Os12g0123800.
DR GeneID; 4351370; -.
DR Gramene; Os12t0123800-01; Os12t0123800-01; Os12g0123800.
DR KEGG; osa:4351370; -.
DR eggNOG; ENOG502SHAM; Eukaryota.
DR HOGENOM; CLU_035664_6_2_1; -.
DR InParanoid; Q5CD17; -.
DR OMA; DREIFRQ; -.
DR OrthoDB; 1287687at2759; -.
DR Proteomes; UP000000763; Chromosome 12.
DR Proteomes; UP000007752; Chromosome 12.
DR Proteomes; UP000059680; Chromosome 12.
DR ExpressionAtlas; Q5CD17; baseline and differential.
DR Genevisible; Q5CD17; OS.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0043565; F:sequence-specific DNA binding; IDA:UniProtKB.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
DR Gene3D; 2.170.150.80; -; 1.
DR InterPro; IPR003441; NAC-dom.
DR InterPro; IPR036093; NAC_dom_sf.
DR Pfam; PF02365; NAM; 1.
DR SUPFAM; SSF101941; SSF101941; 1.
DR PROSITE; PS51005; NAC; 1.
PE 2: Evidence at transcript level;
KW DNA-binding; Nucleus; Reference proteome; Stress response; Transcription;
KW Transcription regulation.
FT CHAIN 1..396
FT /note="NAC domain-containing protein 77"
FT /id="PRO_0000132323"
FT DOMAIN 19..187
FT /note="NAC"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00353"
FT CONFLICT 83
FT /note="M -> I (in Ref. 1; BAD91001)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 396 AA; 43848 MW; E65E423501E8B84D CRC64;
MVESTTSLVK LEQDGGLFLP PGFRFHPTDA EVILSYLLQK LLNPSFTSLP IGEVDLNKCE
PWDLPSKAKM GEKEWYFFSH KDMKYPTGMR TNRATKEGYW KATGKDREIF RQPAAVNTSS
YGGSSNKKKQ LVGMKKTLVF YMGRAPKGTK TNWVMHEFRL HANLHNHHPN LRLNPKDEWV
VCKVFHKKQG DEAINNQQQQ PQYAAVDQYS AETPNSGSSV VQAGDIDGGD DFFQLDDIID
PSIYFVSNSS NILSAPPNNN NAVYSVSAST TTTNTTAVSF QQQPNYYSLI NKSSSSSSSN
YSAPLQQHVS SWNITPGAGG AHGIGSSYYN LQQQQAAMVK ALENVIAVPN FGTLLPSSNK
LKGLSKSAMA GLTQQNPLGV PQYKIENYGD HYISRQ
