NAC87_ARATH
ID NAC87_ARATH Reviewed; 335 AA.
AC Q9FK44;
DT 20-DEC-2017, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 127.
DE RecName: Full=NAC domain-containing protein 87 {ECO:0000303|PubMed:15029955};
DE Short=ANAC087 {ECO:0000303|PubMed:15029955};
GN Name=NAC087 {ECO:0000312|EMBL:AED92530.1};
GN OrderedLocusNames=At5g18270 {ECO:0000312|Araport:AT5G18270};
GN ORFNames=MRG7.23 {ECO:0000312|EMBL:BAB09485.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9734815; DOI=10.1093/dnares/5.3.203;
RA Kotani H., Nakamura Y., Sato S., Asamizu E., Kaneko T., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. VI. Sequence
RT features of the regions of 1,367,185 bp covered by 19 physically assigned
RT P1 and TAC clones.";
RL DNA Res. 5:203-216(1998).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=15029955; DOI=10.1093/dnares/10.6.239;
RA Ooka H., Satoh K., Doi K., Nagata T., Otomo Y., Murakami K., Matsubara K.,
RA Osato N., Kawai J., Carninci P., Hayashizaki Y., Suzuki K., Kojima K.,
RA Takahara Y., Yamamoto K., Kikuchi S.;
RT "Comprehensive analysis of NAC family genes in Oryza sativa and Arabidopsis
RT thaliana.";
RL DNA Res. 10:239-247(2003).
RN [6]
RP FUNCTION.
RX PubMed=27021284; DOI=10.1038/srep23609;
RA Oda-Yamamizo C., Mitsuda N., Sakamoto S., Ogawa D., Ohme-Takagi M.,
RA Ohmiya A.;
RT "The NAC transcription factor ANAC046 is a positive regulator of
RT chlorophyll degradation and senescence in Arabidopsis leaves.";
RL Sci. Rep. 6:23609-23609(2016).
CC -!- FUNCTION: Binds to the promoter regions of genes involved in
CC chlorophyll catabolic processes, such as NYC1, SGR1, SGR2 and PAO.
CC {ECO:0000269|PubMed:27021284}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00353}.
CC -!- DOMAIN: The NAC domain includes a DNA binding domain and a dimerization
CC domain. {ECO:0000255|PROSITE-ProRule:PRU00353}.
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DR EMBL; AB012246; BAB09485.1; -; Genomic_DNA.
DR EMBL; CP002688; AED92530.1; -; Genomic_DNA.
DR EMBL; BT005713; AAO64133.1; -; mRNA.
DR EMBL; BT006070; AAP04055.1; -; mRNA.
DR EMBL; AK228369; BAF00308.1; -; mRNA.
DR RefSeq; NP_197328.3; NM_121832.4.
DR AlphaFoldDB; Q9FK44; -.
DR SMR; Q9FK44; -.
DR STRING; 3702.AT5G18270.1; -.
DR PaxDb; Q9FK44; -.
DR PRIDE; Q9FK44; -.
DR ProteomicsDB; 251041; -.
DR EnsemblPlants; AT5G18270.1; AT5G18270.1; AT5G18270.
DR GeneID; 831945; -.
DR Gramene; AT5G18270.1; AT5G18270.1; AT5G18270.
DR KEGG; ath:AT5G18270; -.
DR Araport; AT5G18270; -.
DR TAIR; locus:2172334; AT5G18270.
DR eggNOG; ENOG502QSPY; Eukaryota.
DR OrthoDB; 949787at2759; -.
DR PhylomeDB; Q9FK44; -.
DR PRO; PR:Q9FK44; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FK44; baseline and differential.
DR GO; GO:0005737; C:cytoplasm; IDA:TAIR.
DR GO; GO:0005634; C:nucleus; IDA:TAIR.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR GO; GO:0000976; F:transcription cis-regulatory region binding; IPI:TAIR.
DR Gene3D; 2.170.150.80; -; 1.
DR InterPro; IPR003441; NAC-dom.
DR InterPro; IPR036093; NAC_dom_sf.
DR Pfam; PF02365; NAM; 1.
DR SUPFAM; SSF101941; SSF101941; 1.
DR PROSITE; PS51005; NAC; 1.
PE 2: Evidence at transcript level;
KW DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..335
FT /note="NAC domain-containing protein 87"
FT /id="PRO_0000442493"
FT DOMAIN 21..172
FT /note="NAC"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00353"
FT DNA_BIND 119..178
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00353"
SQ SEQUENCE 335 AA; 38271 MW; 6B8CF20E10CD68AF CRC64;
MAVVVEEGVV LNHGGEELVD LPPGFRFHPT DEEIITCYLK EKVLNSRFTA VAMGEADLNK
CEPWDLPKRA KMGEKEFYFF CQRDRKYPTG MRTNRATESG YWKATGKDKE IFKGKGCLVG
MKKTLVFYRG RAPKGEKTNW VMHEYRLEGK YSYYNLPKSA RDEWVVCRVF HKNNPSTTTQ
PMTRIPVEDF TRMDSLENID HLLDFSSLPP LIDPSFMSQT EQPNFKPINP PTYDISSPIQ
PHHFNSYQSI FNHQVFGSAS GSTYNNNNEM IKMEQSLVSV SQETCLSSDV NANMTTTTEV
SSGPVMKQEM GMMGMVNGSK SYEDLCDLRG DLWDF
