NAC89_ARATH
ID NAC89_ARATH Reviewed; 340 AA.
AC Q94F58; Q9FMS2;
DT 21-MAR-2012, integrated into UniProtKB/Swiss-Prot.
DT 01-DEC-2001, sequence version 1.
DT 03-AUG-2022, entry version 110.
DE RecName: Full=NAC domain-containing protein 89;
DE Short=ANAC089;
DE AltName: Full=Protein FRUCTOSE-SENSING QUANTITATIVE TRAIT LOCUS 6;
GN Name=NAC089; Synonyms=FAN, FSQ6; OrderedLocusNames=At5g22290;
GN ORFNames=MWD9.7, T6G21.9;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9501997; DOI=10.1093/dnares/4.6.401;
RA Nakamura Y., Sato S., Kaneko T., Kotani H., Asamizu E., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. III. Sequence
RT features of the regions of 1,191,918 bp covered by seventeen physically
RT assigned P1 clones.";
RL DNA Res. 4:401-414(1997).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130714; DOI=10.1038/35048507;
RA Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D.,
RA Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A.,
RA Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T.,
RA Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A.,
RA McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M.,
RA Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W.,
RA Bevan M., Fransz P.F.;
RT "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL Nature 408:823-826(2000).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [5]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=15029955; DOI=10.1093/dnares/10.6.239;
RA Ooka H., Satoh K., Doi K., Nagata T., Otomo Y., Murakami K., Matsubara K.,
RA Osato N., Kawai J., Carninci P., Hayashizaki Y., Suzuki K., Kojima K.,
RA Takahara Y., Yamamoto K., Kikuchi S.;
RT "Comprehensive analysis of NAC family genes in Oryza sativa and Arabidopsis
RT thaliana.";
RL DNA Res. 10:239-247(2003).
RN [6]
RP FUNCTION, INTERACTION WITH PAS1, AND SUBCELLULAR LOCATION.
RX PubMed=16803883; DOI=10.1074/jbc.m601815200;
RA Smyczynski C., Roudier F., Gissot L., Vaillant E., Grandjean O., Morin H.,
RA Masson T., Bellec Y., Geelen D., Faure J.D.;
RT "The C terminus of the immunophilin PASTICCINO1 is required for plant
RT development and for interaction with a NAC-like transcription factor.";
RL J. Biol. Chem. 281:25475-25484(2006).
CC -!- FUNCTION: Transcription factor involved in plant cell division.
CC {ECO:0000269|PubMed:16803883}.
CC -!- SUBUNIT: Interacts with PAS1. {ECO:0000269|PubMed:16803883}.
CC -!- INTERACTION:
CC Q94F58; Q9LVC0: AGP14; NbExp=2; IntAct=EBI-2319707, EBI-4429269;
CC Q94F58; Q9FI10: At5g44550; NbExp=2; IntAct=EBI-2319707, EBI-4440466;
CC Q94F58; Q7DMA9: PAS1; NbExp=6; IntAct=EBI-2319707, EBI-637668;
CC Q94F58; O80995: PDF1.3; NbExp=3; IntAct=EBI-2319707, EBI-25522494;
CC Q94F58; O80920: PYL4; NbExp=3; IntAct=EBI-2319707, EBI-2349683;
CC Q94F58; Q1ECF1: PYL7; NbExp=3; IntAct=EBI-2319707, EBI-2363203;
CC Q94F58; Q84MC7: PYL9; NbExp=3; IntAct=EBI-2319707, EBI-2349513;
CC Q94F58; P82874: TOM20-3; NbExp=2; IntAct=EBI-2319707, EBI-2352074;
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000305}. Nucleus
CC {ECO:0000255|PROSITE-ProRule:PRU00353}. Note=Relocalization from the
CC cytoplasm into the nucleus is induced by auxin treatment and in
CC association with PAS1. {ECO:0000269|PubMed:16803883}.
CC -!- DOMAIN: The NAC domain includes a DNA-binding domain and a dimerization
CC domain.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAB08327.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
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DR EMBL; AB007651; BAB08327.1; ALT_INIT; Genomic_DNA.
DR EMBL; AL589883; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CP002688; AED93007.1; -; Genomic_DNA.
DR EMBL; AF385685; AAK60278.1; -; mRNA.
DR EMBL; AY078006; AAL77707.1; -; mRNA.
DR RefSeq; NP_568414.1; NM_122134.4.
DR AlphaFoldDB; Q94F58; -.
DR SMR; Q94F58; -.
DR BioGRID; 17564; 242.
DR IntAct; Q94F58; 288.
DR STRING; 3702.AT5G22290.1; -.
DR PaxDb; Q94F58; -.
DR PRIDE; Q94F58; -.
DR ProteomicsDB; 251238; -.
DR EnsemblPlants; AT5G22290.1; AT5G22290.1; AT5G22290.
DR GeneID; 832289; -.
DR Gramene; AT5G22290.1; AT5G22290.1; AT5G22290.
DR KEGG; ath:AT5G22290; -.
DR Araport; AT5G22290; -.
DR TAIR; locus:2176362; AT5G22290.
DR eggNOG; ENOG502QRAU; Eukaryota.
DR HOGENOM; CLU_035664_18_0_1; -.
DR InParanoid; Q94F58; -.
DR OMA; GGECCSK; -.
DR OrthoDB; 936963at2759; -.
DR PhylomeDB; Q94F58; -.
DR PRO; PR:Q94F58; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q94F58; baseline and differential.
DR Genevisible; Q94F58; AT.
DR GO; GO:0005783; C:endoplasmic reticulum; IDA:TAIR.
DR GO; GO:0005634; C:nucleus; IDA:TAIR.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IMP:TAIR.
DR GO; GO:0000976; F:transcription cis-regulatory region binding; IPI:TAIR.
DR GO; GO:0009910; P:negative regulation of flower development; IMP:TAIR.
DR GO; GO:0009626; P:plant-type hypersensitive response; IMP:TAIR.
DR GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IDA:TAIR.
DR GO; GO:0034976; P:response to endoplasmic reticulum stress; IMP:TAIR.
DR Gene3D; 2.170.150.80; -; 1.
DR InterPro; IPR003441; NAC-dom.
DR InterPro; IPR036093; NAC_dom_sf.
DR Pfam; PF02365; NAM; 1.
DR SUPFAM; SSF101941; SSF101941; 1.
DR PROSITE; PS51005; NAC; 1.
PE 1: Evidence at protein level;
KW Cytoplasm; DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..340
FT /note="NAC domain-containing protein 89"
FT /id="PRO_0000416138"
FT DOMAIN 21..164
FT /note="NAC"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00353"
FT DNA_BIND 119..170
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00353"
FT REGION 167..198
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 340 AA; 38046 MW; 14DB0290E32E15C1 CRC64;
MDTKAVGVSK DTAASMEAST VFPGFKFSPT DVELISYYLK RKMDGLERSV EVIPDLEIYN
FEPWDLPDKS IVKSDSEWFF FCARGKKYPH GSQNRRATKM GYWKATGKER DVKSGSEVIG
TKRTLVFHIG RAPKGERTDW IMHEYCVKGV SLDDAMVVCR VRRNKEYNSG TSQKAPKPNS
SAEKHAKVQN GATSSGSPSD WDNLVDFYLA GESGEKLLAE MAESSENLQV DNDEDFFADI
LRDEIINLDE AVMTGNTPNE VPTLESASME IRVLPLPNMI DKQMSSLLEE RPSQKKKGKD
ATESLSSCFV GLYSIKSVNK ARWDVIIGVV ALIAMLFYLE
