NAC90_ARATH
ID NAC90_ARATH Reviewed; 235 AA.
AC Q9FMR3;
DT 19-JUL-2004, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 25-MAY-2022, entry version 123.
DE RecName: Full=NAC domain-containing protein 90;
DE Short=ANAC090;
GN Name=NAC090; OrderedLocusNames=At5g22380; ORFNames=MWD9.18;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9501997; DOI=10.1093/dnares/4.6.401;
RA Nakamura Y., Sato S., Kaneko T., Kotani H., Asamizu E., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. III. Sequence
RT features of the regions of 1,191,918 bp covered by seventeen physically
RT assigned P1 clones.";
RL DNA Res. 4:401-414(1997).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=15029955; DOI=10.1093/dnares/10.6.239;
RA Ooka H., Satoh K., Doi K., Nagata T., Otomo Y., Murakami K., Matsubara K.,
RA Osato N., Kawai J., Carninci P., Hayashizaki Y., Suzuki K., Kojima K.,
RA Takahara Y., Yamamoto K., Kikuchi S.;
RT "Comprehensive analysis of NAC family genes in Oryza sativa and Arabidopsis
RT thaliana.";
RL DNA Res. 10:239-247(2003).
CC -!- INTERACTION:
CC Q9FMR3; Q9FLM0: NAC095; NbExp=3; IntAct=EBI-15194071, EBI-15191933;
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00353}.
CC -!- DOMAIN: The NAC domain includes a DNA-binding domain and a dimerization
CC domain.
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DR EMBL; AB007651; BAB08337.1; -; Genomic_DNA.
DR EMBL; CP002688; AED93020.1; -; Genomic_DNA.
DR EMBL; AY086944; AAM64508.1; -; mRNA.
DR RefSeq; NP_197630.1; NM_122143.3.
DR AlphaFoldDB; Q9FMR3; -.
DR SMR; Q9FMR3; -.
DR BioGRID; 17574; 6.
DR IntAct; Q9FMR3; 6.
DR STRING; 3702.AT5G22380.1; -.
DR PaxDb; Q9FMR3; -.
DR PRIDE; Q9FMR3; -.
DR DNASU; 832299; -.
DR EnsemblPlants; AT5G22380.1; AT5G22380.1; AT5G22380.
DR GeneID; 832299; -.
DR Gramene; AT5G22380.1; AT5G22380.1; AT5G22380.
DR KEGG; ath:AT5G22380; -.
DR Araport; AT5G22380; -.
DR TAIR; locus:2176372; AT5G22380.
DR eggNOG; ENOG502QQPM; Eukaryota.
DR HOGENOM; CLU_035664_7_1_1; -.
DR InParanoid; Q9FMR3; -.
DR OMA; CRVYITT; -.
DR OrthoDB; 1400553at2759; -.
DR PhylomeDB; Q9FMR3; -.
DR PRO; PR:Q9FMR3; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FMR3; baseline and differential.
DR Genevisible; Q9FMR3; AT.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR Gene3D; 2.170.150.80; -; 1.
DR InterPro; IPR003441; NAC-dom.
DR InterPro; IPR036093; NAC_dom_sf.
DR Pfam; PF02365; NAM; 1.
DR SUPFAM; SSF101941; SSF101941; 1.
DR PROSITE; PS51005; NAC; 1.
PE 1: Evidence at protein level;
KW DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..235
FT /note="NAC domain-containing protein 90"
FT /id="PRO_0000132315"
FT DOMAIN 5..162
FT /note="NAC"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00353"
SQ SEQUENCE 235 AA; 26722 MW; EAB6E7026BA50B73 CRC64;
MADEVTIGFR FYPTEEELVS FYLRNQLEGR SDDSMHRVIP VLDVFEVEPS HLPNVAGVRC
RGDAEQWFFF VPRQEREARG GRPSRTTGSG YWKATGSPGP VFSKDNKMIG AKKTMVFYTG
KAPTGRKTKW KMNEYHAVDE TVNASTIPKL RREFSLCRVY ITTGSSRAFD RRPEGVLQTE
RMLTSDVAVA ETSFRVESSL ETSISGGEHI DVSMNTEFVD GLSEPMWDWE QLTWP