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NADE_YEAST
ID   NADE_YEAST              Reviewed;         714 AA.
AC   P38795; D3DL24;
DT   01-FEB-1995, integrated into UniProtKB/Swiss-Prot.
DT   01-FEB-1995, sequence version 1.
DT   03-AUG-2022, entry version 179.
DE   RecName: Full=Glutamine-dependent NAD(+) synthetase;
DE            EC=6.3.5.1;
DE   AltName: Full=NAD(+) synthase [glutamine-hydrolyzing];
GN   Name=QNS1; OrderedLocusNames=YHR074W;
OS   Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC   Saccharomycetales; Saccharomycetaceae; Saccharomyces.
OX   NCBI_TaxID=559292;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 204508 / S288c;
RX   PubMed=8091229; DOI=10.1126/science.8091229;
RA   Johnston M., Andrews S., Brinkman R., Cooper J., Ding H., Dover J., Du Z.,
RA   Favello A., Fulton L., Gattung S., Geisel C., Kirsten J., Kucaba T.,
RA   Hillier L.W., Jier M., Johnston L., Langston Y., Latreille P., Louis E.J.,
RA   Macri C., Mardis E., Menezes S., Mouser L., Nhan M., Rifkin L., Riles L.,
RA   St Peter H., Trevaskis E., Vaughan K., Vignati D., Wilcox L., Wohldman P.,
RA   Waterston R., Wilson R., Vaudin M.;
RT   "Complete nucleotide sequence of Saccharomyces cerevisiae chromosome
RT   VIII.";
RL   Science 265:2077-2082(1994).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=ATCC 204508 / S288c;
RX   PubMed=24374639; DOI=10.1534/g3.113.008995;
RA   Engel S.R., Dietrich F.S., Fisk D.G., Binkley G., Balakrishnan R.,
RA   Costanzo M.C., Dwight S.S., Hitz B.C., Karra K., Nash R.S., Weng S.,
RA   Wong E.D., Lloyd P., Skrzypek M.S., Miyasato S.R., Simison M., Cherry J.M.;
RT   "The reference genome sequence of Saccharomyces cerevisiae: Then and now.";
RL   G3 (Bethesda) 4:389-398(2014).
RN   [3]
RP   LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
RX   PubMed=14562106; DOI=10.1038/nature02046;
RA   Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N.,
RA   O'Shea E.K., Weissman J.S.;
RT   "Global analysis of protein expression in yeast.";
RL   Nature 425:737-741(2003).
RN   [4]
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX   PubMed=19779198; DOI=10.1126/science.1172867;
RA   Holt L.J., Tuch B.B., Villen J., Johnson A.D., Gygi S.P., Morgan D.O.;
RT   "Global analysis of Cdk1 substrate phosphorylation sites provides insights
RT   into evolution.";
RL   Science 325:1682-1686(2009).
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=ATP + deamido-NAD(+) + H2O + L-glutamine = AMP + diphosphate +
CC         H(+) + L-glutamate + NAD(+); Xref=Rhea:RHEA:24384, ChEBI:CHEBI:15377,
CC         ChEBI:CHEBI:15378, ChEBI:CHEBI:29985, ChEBI:CHEBI:30616,
CC         ChEBI:CHEBI:33019, ChEBI:CHEBI:57540, ChEBI:CHEBI:58359,
CC         ChEBI:CHEBI:58437, ChEBI:CHEBI:456215; EC=6.3.5.1;
CC   -!- PATHWAY: Cofactor biosynthesis; NAD(+) biosynthesis; NAD(+) from
CC       deamido-NAD(+) (L-Gln route): step 1/1.
CC   -!- MISCELLANEOUS: Present with 172 molecules/cell in log phase SD medium.
CC       {ECO:0000269|PubMed:14562106}.
CC   -!- SIMILARITY: In the C-terminal section; belongs to the NAD synthetase
CC       family. {ECO:0000305}.
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DR   EMBL; U10556; AAB68889.1; -; Genomic_DNA.
DR   EMBL; BK006934; DAA06768.1; -; Genomic_DNA.
DR   PIR; S46811; S46811.
DR   RefSeq; NP_011941.1; NM_001179204.1.
DR   AlphaFoldDB; P38795; -.
DR   SMR; P38795; -.
DR   BioGRID; 36508; 173.
DR   DIP; DIP-5592N; -.
DR   IntAct; P38795; 3.
DR   MINT; P38795; -.
DR   STRING; 4932.YHR074W; -.
DR   iPTMnet; P38795; -.
DR   MaxQB; P38795; -.
DR   PaxDb; P38795; -.
DR   PRIDE; P38795; -.
DR   EnsemblFungi; YHR074W_mRNA; YHR074W; YHR074W.
DR   GeneID; 856473; -.
DR   KEGG; sce:YHR074W; -.
DR   SGD; S000001116; QNS1.
DR   VEuPathDB; FungiDB:YHR074W; -.
DR   eggNOG; KOG2303; Eukaryota.
DR   GeneTree; ENSGT00390000010152; -.
DR   HOGENOM; CLU_011884_2_0_1; -.
DR   InParanoid; P38795; -.
DR   OMA; CEDHFYE; -.
DR   BioCyc; YEAST:MON3O-845; -.
DR   Reactome; R-SCE-196807; Nicotinate metabolism.
DR   UniPathway; UPA00253; UER00334.
DR   PRO; PR:P38795; -.
DR   Proteomes; UP000002311; Chromosome VIII.
DR   RNAct; P38795; protein.
DR   GO; GO:0005737; C:cytoplasm; IDA:SGD.
DR   GO; GO:0005634; C:nucleus; IDA:SGD.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0004359; F:glutaminase activity; IDA:SGD.
DR   GO; GO:0003952; F:NAD+ synthase (glutamine-hydrolyzing) activity; IDA:SGD.
DR   GO; GO:0009435; P:NAD biosynthetic process; IDA:SGD.
DR   CDD; cd00553; NAD_synthase; 1.
DR   Gene3D; 3.40.50.620; -; 1.
DR   Gene3D; 3.60.110.10; -; 1.
DR   HAMAP; MF_02090; NadE_glutamine_dep; 1.
DR   InterPro; IPR003010; C-N_Hydrolase.
DR   InterPro; IPR036526; C-N_Hydrolase_sf.
DR   InterPro; IPR014445; Gln-dep_NAD_synthase.
DR   InterPro; IPR022310; NAD/GMP_synthase.
DR   InterPro; IPR003694; NAD_synthase.
DR   InterPro; IPR014729; Rossmann-like_a/b/a_fold.
DR   PANTHER; PTHR23090; PTHR23090; 1.
DR   Pfam; PF00795; CN_hydrolase; 1.
DR   Pfam; PF02540; NAD_synthase; 1.
DR   PIRSF; PIRSF006630; NADS_GAT; 1.
DR   SUPFAM; SSF56317; SSF56317; 1.
DR   TIGRFAMs; TIGR00552; nadE; 1.
DR   PROSITE; PS50263; CN_HYDROLASE; 1.
PE   1: Evidence at protein level;
KW   ATP-binding; Ligase; NAD; Nucleotide-binding; Reference proteome.
FT   CHAIN           1..714
FT                   /note="Glutamine-dependent NAD(+) synthetase"
FT                   /id="PRO_0000152248"
FT   DOMAIN          5..275
FT                   /note="CN hydrolase"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00054"
FT   REGION          329..714
FT                   /note="Ligase"
FT   ACT_SITE        45
FT                   /note="Proton acceptor; for glutaminase activity"
FT                   /evidence="ECO:0000250|UniProtKB:P9WJJ3"
FT   ACT_SITE        114
FT                   /note="For glutaminase activity"
FT                   /evidence="ECO:0000250|UniProtKB:P9WJJ3"
FT   ACT_SITE        175
FT                   /note="Nucleophile; for glutaminase activity"
FT                   /evidence="ECO:0000250|UniProtKB:P9WJJ3"
FT   ACT_SITE        361
FT                   /evidence="ECO:0000250"
FT   BINDING         359..366
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000250"
SQ   SEQUENCE   714 AA;  80686 MW;  ED8C723550F9E8A9 CRC64;
     MSHLITLATC NLNQWALDFE GNRDRILQSI KIAKERGARL RVGPELEITG YGCLDHFLEN
     DVCLHSWEMY AQIIKNKETH GLILDIGMPV LHKNVRYNCR LLSLDGEILF IRPKIWLAND
     GNYREMRFFT PWMKPGVVED FILPPEIQKV TGQRLVPFGD AVINSLDTCI GTETCEELFT
     PQSPHIAMSL DGVEIMTNSS GSHHELRKLN KRLDLILNAT KRCGGVYLYA NQRGCDGDRL
     YYDGCALIAI NGTIVAQGSQ FSLDDVEVVT ATVDLEEVRS YRAAVMSRGL QASLAEIKFK
     RIDIPVELAL MTSRFDPTVC PTKVREPFYH SPEEEIALGP ACWMWDYLRR CNGTGFFLPL
     SGGIDSCATA MIVHSMCRLV TDAAQNGNEQ VIKDVRKITR SGDDWIPDSP QDLASKIFHS
     CFMGTENSSK ETRNRAKDLS NAIGSYHVDL KMDSLVSSVV SLFEVATGKK PIYKIFGGSQ
     IENLALQNIQ ARLRMVLSYL FAQLLPWVRG IPNSGGLLVL GSANVDECLR GYLTKYDCSS
     ADINPIGGIS KTDLKRFIAY ASKQYNMPIL NDFLNATPTA ELEPMTKDYV QSDEIDMGMT
     YEELGVFGYL RKVEKCGPYS MFLKLLHQWS PKLTPRQISE KVKRFFFFYA INRHKQTVLT
     PSYHAEQYSP EDNRFDLRPF LINPRFPWAS RKIDEVVEQC EAHKGSTLDI MSID
 
 
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