A18_RABPU
ID A18_RABPU Reviewed; 493 AA.
AC Q6RZG4;
DT 22-NOV-2005, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 64.
DE RecName: Full=Transcript termination protein A18;
DE EC=3.6.4.-;
GN OrderedLocusNames=RPXV127;
OS Rabbitpox virus (strain Utrecht) (RPV).
OC Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes;
OC Chitovirales; Poxviridae; Chordopoxvirinae; Orthopoxvirus; Vaccinia virus.
OX NCBI_TaxID=45417;
OH NCBI_TaxID=9986; Oryctolagus cuniculus (Rabbit).
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=16227218; DOI=10.1099/vir.0.81331-0;
RA Li G., Chen N., Roper R.L., Feng Z., Hunter A.L., Danila M.,
RA Lefkowitz E.J., Buller R.M.L., Upton C.;
RT "Complete coding sequences of the rabbitpox virus genome.";
RL J. Gen. Virol. 86:2969-2977(2005).
CC -!- FUNCTION: DNA helicase which seems to act as a postreplicative
CC transcription termination factor. Involved in ATP-dependent release of
CC nascent RNA. Forms a stable complex with single-stranded DNA, and to a
CC lesser extent RNA (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Interacts with G2. Might be part of a transcription complex
CC composed at least of G2, A18, and H5. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000250}. Note=Localizes to the
CC virion core. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the helicase family. Poxviruses subfamily.
CC {ECO:0000305}.
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DR EMBL; AY484669; AAS49840.1; -; Genomic_DNA.
DR PRIDE; Q6RZG4; -.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR Gene3D; 3.40.50.300; -; 2.
DR InterPro; IPR006935; Helicase/UvrB_N.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR027417; P-loop_NTPase.
DR Pfam; PF04851; ResIII; 1.
DR SMART; SM00487; DEXDc; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
PE 3: Inferred from homology;
KW ATP-binding; DNA-binding; Helicase; Hydrolase; Late protein;
KW Nucleotide-binding; Transcription; Virion.
FT CHAIN 1..493
FT /note="Transcript termination protein A18"
FT /id="PRO_0000102187"
FT DOMAIN 100..256
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00541"
FT MOTIF 206..209
FT /note="DESH box"
FT BINDING 113..120
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00541"
SQ SEQUENCE 493 AA; 56716 MW; DCFB6514B3DE081A CRC64;
MSLLKMEYNL YAELKKMTCG QPLSLFNEDG DFVEVEPGSS FKFLIPKGFY ASPSVKTSLV
FETLTTTDNK ITSINPTNAP KLYPLQRKVV SEVVSNMRKM IESKRPLYIT LHLACGFGKT
ITTCYLMATH GRKTVICVPN KMLIHQWKTQ VEAVGLEHKI SIDGVSSLLK ELKTQSPDVL
IVVSRHLTND AFCKYINKHY DLFILDESHT YNLMNNTAVT RFLAYYPPMM CYFLTATPRP
ANRIYCNSII NIAKLSDLKK TIYAVDSFFE PYSTDNIRHM VKRLDGPSNK YHIYTEKLLS
VDEPRNQLIL NTLVEEFKSG TINRILVITK LREHMVLFYK RLLDLFGPEV VFIGDAQNRR
TPDMVKSIKE LNRFIFVSTL FYSGTGLDIP SLDSLFICSA VINNMQIEQL LGRVCRETEL
LDRTVYVFPN TSIKEIKYMI GNFMQRIISL SVDKLGFKQE SYRKHQESDP TSVCTTSSRE
ERVLNRIFNS QNR