ID   NAP1B_ORYSJ             Reviewed;         364 AA.
AC   Q53WK4; A0A0N7KL59;
DT   16-OCT-2013, integrated into UniProtKB/Swiss-Prot.
DT   24-MAY-2005, sequence version 1.
DT   03-AUG-2022, entry version 102.
DE   RecName: Full=Nucleosome assembly protein 1;2;
DE            Short=OsNAP1;2;
DE   AltName: Full=Nucleosome assembly protein 1-like 2;
DE            Short=OsNAP1_L2;
DE   Flags: Precursor;
GN   Name=NAP1;2; Synonyms=NAP1_L2;
GN   OrderedLocusNames=Os05g0539700, LOC_Os05g46230;
GN   ORFNames=OsJ_19377, OSJNBa0052K01.18;
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16261349; DOI=10.1007/s00438-005-0039-y;
RA   Cheng C.-H., Chung M.C., Liu S.-M., Chen S.-K., Kao F.Y., Lin S.-J.,
RA   Hsiao S.-H., Tseng I.C., Hsing Y.-I.C., Wu H.-P., Chen C.-S., Shaw J.-F.,
RA   Wu J., Matsumoto T., Sasaki T., Chen H.-C., Chow T.-Y.;
RT   "A fine physical map of the rice chromosome 5.";
RL   Mol. Genet. Genomics 274:337-345(2005).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=18089549; DOI=10.1093/nar/gkm978;
RG   The rice annotation project (RAP);
RT   "The rice annotation project database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [4]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA   Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA   Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA   Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA   Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA   Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA   Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA   Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA   Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA   Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA   Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA   Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA   Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA   Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA   McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT   "The genomes of Oryza sativa: a history of duplications.";
RL   PLoS Biol. 3:266-281(2005).
RN   [6]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=12869764; DOI=10.1126/science.1081288;
RG   The rice full-length cDNA consortium;
RT   "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT   japonica rice.";
RL   Science 301:376-379(2003).
CC   -!- FUNCTION: May modulate chromatin structure by regulation of nucleosome
CC       assembly/disassembly. {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}. Cytoplasm {ECO:0000250}.
CC   -!- DOMAIN: The acidic domain is probably involved in the interaction with
CC       histones.
CC   -!- SIMILARITY: Belongs to the nucleosome assembly protein (NAP) family.
CC       {ECO:0000305}.
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DR   EMBL; AC119291; AAV59408.1; -; Genomic_DNA.
DR   EMBL; AP008211; BAF18089.1; -; Genomic_DNA.
DR   EMBL; AP014961; BAS95105.1; -; Genomic_DNA.
DR   EMBL; CM000142; EEE64526.1; -; Genomic_DNA.
DR   EMBL; AK071120; BAG92324.1; -; mRNA.
DR   RefSeq; XP_015639209.1; XM_015783723.1.
DR   AlphaFoldDB; Q53WK4; -.
DR   SMR; Q53WK4; -.
DR   STRING; 4530.OS05T0539700-01; -.
DR   PaxDb; Q53WK4; -.
DR   PRIDE; Q53WK4; -.
DR   EnsemblPlants; Os05t0539700-01; Os05t0539700-01; Os05g0539700.
DR   GeneID; 4339460; -.
DR   Gramene; Os05t0539700-01; Os05t0539700-01; Os05g0539700.
DR   KEGG; osa:4339460; -.
DR   eggNOG; KOG1507; Eukaryota.
DR   HOGENOM; CLU_038841_4_0_1; -.
DR   InParanoid; Q53WK4; -.
DR   OMA; VDTESCN; -.
DR   OrthoDB; 1216172at2759; -.
DR   Proteomes; UP000000763; Chromosome 5.
DR   Proteomes; UP000007752; Chromosome 5.
DR   Proteomes; UP000059680; Chromosome 5.
DR   Genevisible; Q53WK4; OS.
DR   GO; GO:0000785; C:chromatin; IBA:GO_Central.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR   GO; GO:0003682; F:chromatin binding; IBA:GO_Central.
DR   GO; GO:0042393; F:histone binding; IBA:GO_Central.
DR   GO; GO:0000724; P:double-strand break repair via homologous recombination; IEA:UniProt.
DR   GO; GO:0006334; P:nucleosome assembly; IBA:GO_Central.
DR   InterPro; IPR037231; NAP-like_sf.
DR   InterPro; IPR002164; NAP_family.
DR   PANTHER; PTHR11875; PTHR11875; 1.
DR   Pfam; PF00956; NAP; 1.
DR   SUPFAM; SSF143113; SSF143113; 1.
PE   2: Evidence at transcript level;
KW   Chaperone; Coiled coil; Cytoplasm; Lipoprotein; Methylation; Nucleus;
KW   Prenylation; Reference proteome.
FT   CHAIN           1..361
FT                   /note="Nucleosome assembly protein 1;2"
FT                   /id="PRO_0000423689"
FT   PROPEP          362..364
FT                   /note="Removed in mature form"
FT                   /evidence="ECO:0000250|UniProtKB:Q9SZI2"
FT                   /id="PRO_0000423690"
FT   REGION          250..269
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          301..364
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          32..86
FT                   /evidence="ECO:0000255"
FT   MOTIF           53..68
FT                   /note="Nuclear export signal"
FT                   /evidence="ECO:0000255"
FT   MOTIF           227..232
FT                   /note="Nuclear localization signal"
FT                   /evidence="ECO:0000255"
FT   COMPBIAS        307..339
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   MOD_RES         361
FT                   /note="Cysteine methyl ester"
FT                   /evidence="ECO:0000250|UniProtKB:Q9SZI2"
FT   LIPID           361
FT                   /note="S-farnesyl cysteine"
FT                   /evidence="ECO:0000250|UniProtKB:Q9SZI2"
SQ   SEQUENCE   364 AA;  41684 MW;  C8F6BB100B44C4D3 CRC64;
     MSDGKDSLDL SGLGAAVPNA KELSAEDKAN LVESIKNTLQ GLAARHTDVL ESLEPKVRKR
     VEVLREIQSQ HDDLEAKFFE ERAALEAKYQ KMYEPLYSKR YEIVNGVVEV DGVTKEAADE
     TPAEQKEEKG VPEFWLNAMK NHEILSEEIQ ERDEEALKYL KDIKWYRISE PKGFKLEFYF
     DTNPFFKNSV LTKTYHMIDE DEPILEKAIG TEIEWFPGKC LTQKVLKKKP KKGSKNTKPI
     TKTENCESFF NFFSPPQVPD DDEEIDEDTA EQLQNQMEQD YDIGSTIRDK IIPHAVSWFT
     GEAAQDEDFE GIMDDEDDDD EDDDDDEDED DEGDDEDDED EKKGGRVPAG EGQQGERPAE
     CKQQ