NARF_CAEEL
ID NARF_CAEEL Reviewed; 457 AA.
AC Q9N392;
DT 22-SEP-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2003, sequence version 5.
DT 03-AUG-2022, entry version 114.
DE RecName: Full=Probable cytosolic Fe-S cluster assembly factor oxy-4;
GN Name=oxy-4; ORFNames=Y54H5A.4;
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
RN [2]
RP DISRUPTION PHENOTYPE, AND MUTAGENESIS OF ASP-373.
RX PubMed=19335616; DOI=10.1111/j.1365-2443.2009.01282.x;
RA Fujii M., Adachi N., Shikatani K., Ayusawa D.;
RT "[FeFe]-hydrogenase-like gene is involved in the regulation of sensitivity
RT to oxygen in yeast and nematode.";
RL Genes Cells 14:457-468(2009).
CC -!- FUNCTION: Component of the cytosolic iron-sulfur (Fe/S) protein
CC assembly machinery. Required for maturation of extramitochondrial Fe/S
CC proteins (By similarity). {ECO:0000250}.
CC -!- DISRUPTION PHENOTYPE: Arrest at the L2-L3 stage in 90% oxygen.
CC {ECO:0000269|PubMed:19335616}.
CC -!- SIMILARITY: Belongs to the NARF family. {ECO:0000305}.
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DR EMBL; FO081201; CCD69851.1; -; Genomic_DNA.
DR RefSeq; NP_498092.4; NM_065691.5.
DR AlphaFoldDB; Q9N392; -.
DR SMR; Q9N392; -.
DR BioGRID; 40933; 2.
DR IntAct; Q9N392; 1.
DR STRING; 6239.Y54H5A.4; -.
DR EPD; Q9N392; -.
DR PaxDb; Q9N392; -.
DR PeptideAtlas; Q9N392; -.
DR EnsemblMetazoa; Y54H5A.4.1; Y54H5A.4.1; WBGene00021902.
DR GeneID; 175702; -.
DR KEGG; cel:CELE_Y54H5A.4; -.
DR UCSC; Y54H5A.4.1; c. elegans.
DR CTD; 175702; -.
DR WormBase; Y54H5A.4; CE29883; WBGene00021902; oxy-4.
DR eggNOG; KOG2439; Eukaryota.
DR GeneTree; ENSGT00940000153514; -.
DR HOGENOM; CLU_018240_0_0_1; -.
DR InParanoid; Q9N392; -.
DR OMA; PHEQRAW; -.
DR OrthoDB; 705416at2759; -.
DR PhylomeDB; Q9N392; -.
DR PRO; PR:Q9N392; -.
DR Proteomes; UP000001940; Chromosome III.
DR Bgee; WBGene00021902; Expressed in germ line (C elegans) and 4 other tissues.
DR GO; GO:0097361; C:CIA complex; IBA:GO_Central.
DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IBA:GO_Central.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
DR InterPro; IPR009016; Fe_hydrogenase.
DR InterPro; IPR004108; Fe_hydrogenase_lsu_C.
DR Pfam; PF02906; Fe_hyd_lg_C; 1.
DR SUPFAM; SSF53920; SSF53920; 1.
PE 1: Evidence at protein level;
KW 4Fe-4S; Iron; Iron-sulfur; Metal-binding; Reference proteome.
FT CHAIN 1..457
FT /note="Probable cytosolic Fe-S cluster assembly factor oxy-
FT 4"
FT /id="PRO_0000383695"
FT REGION 38..59
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 25
FT /ligand="[4Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:49883"
FT /ligand_label="1"
FT /evidence="ECO:0000255"
FT BINDING 71
FT /ligand="[4Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:49883"
FT /ligand_label="1"
FT /evidence="ECO:0000255"
FT BINDING 74
FT /ligand="[4Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:49883"
FT /ligand_label="1"
FT /evidence="ECO:0000255"
FT BINDING 77
FT /ligand="[4Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:49883"
FT /ligand_label="1"
FT /evidence="ECO:0000255"
FT BINDING 176
FT /ligand="[4Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:49883"
FT /ligand_label="2"
FT /evidence="ECO:0000255"
FT BINDING 232
FT /ligand="[4Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:49883"
FT /ligand_label="2"
FT /evidence="ECO:0000255"
FT BINDING 380
FT /ligand="[4Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:49883"
FT /ligand_label="2"
FT /evidence="ECO:0000255"
FT BINDING 384
FT /ligand="[4Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:49883"
FT /ligand_label="2"
FT /evidence="ECO:0000255"
FT MUTAGEN 373
FT /note="D->N: In allele qa5001; increased sensitivity to
FT oxygen."
FT /evidence="ECO:0000269|PubMed:19335616"
SQ SEQUENCE 457 AA; 50824 MW; 571C63FA6CD381EA CRC64;
MEDSGFSGVV RLSNVSDFIA PNLDCIIPLE TRTVEKKKEE SQVNIRTKKP KDKESSKTEE
KKSVKISLAD CLACSGCITS AETVLVEEQS FGRVYEGIQN SKLSVVTVSP QAITSIAVKI
GKSTNEVAKI IASFFRRLGV KYVIDSSFAR KFAHSLIYEE LSTTPSTSRP LLSSACPGFV
CYAEKSHGEL LIPKISKIRS PQAISGAIIK GFLAKREGLS PCDVFHAAVM PCFDKKLEAS
REQFKVDGTD VRETDCVIST AELLEEIIKL ENDEAGDVEN RSEEEQWLSA LSKGSVIGDD
GGASGGYADR IVRDFVLENG GGIVKTSKLN KNMFSTTVES EAGEILLRVA KVYGFRNVQN
LVRKMKTKKE KTDYVEIMAC PGGCANGGGQ IRYETMDERE EKLIKVEALY EDLPRQDDEE
TWIKVREEWE KLDKNYRNLL FTDYRPVETN VAQVLKW