NCAP_BEFVB
ID NCAP_BEFVB Reviewed; 431 AA.
AC Q65474;
DT 21-AUG-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1996, sequence version 1.
DT 23-FEB-2022, entry version 83.
DE RecName: Full=Nucleoprotein;
DE Short=NP;
DE AltName: Full=Nucleocapsid protein;
DE Short=Protein N;
GN Name=N;
OS Bovine ephemeral fever virus (strain BB7721) (BEFV).
OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina;
OC Monjiviricetes; Mononegavirales; Rhabdoviridae; Alpharhabdovirinae;
OC Ephemerovirus.
OX NCBI_TaxID=928297;
OH NCBI_TaxID=9913; Bos taurus (Bovine).
OH NCBI_TaxID=89462; Bubalus bubalis (Domestic water buffalo).
OH NCBI_TaxID=58271; Culicoides.
OH NCBI_TaxID=9970; Syncerus caffer (African buffalo).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX PubMed=8046391; DOI=10.1099/0022-1317-75-8-1889;
RA Walker P.J., Wang Y., Cowley J.A., McWilliam S.M., Prehaud C.J.;
RT "Structural and antigenic analysis of the nucleoprotein of bovine ephemeral
RT fever rhabdovirus.";
RL J. Gen. Virol. 75:1889-1899(1994).
CC -!- FUNCTION: Encapsidates the genome, protecting it from nucleases. If
CC expressed without protein P it binds non-specifically RNA and therefore
CC can bind it's own mRNA. Interaction with protein P abolishes any non-
CC specific RNA binding, and prevents phosphorylation. The soluble N-P
CC complex encapsidates specifically the genomic RNA, with protein N
CC protecting the genome like a pearl necklace. The encapsidated genomic
CC RNA is termed the nucleocapsid (NC) and serves as template for viral
CC transcription and replication. Protein N binds protein P in the NC
CC through a different interaction, and can be phosphorylated. Subsequent
CC viral replication is dependent on intracellular concentration of newly
CC synthesized protein N. During replication, encapsidation by protein N
CC is coupled to RNA synthesis and all replicative products are resistant
CC to nucleases (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Homomultimerizes to form the nucleocapsid. Binds to viral
CC genomic RNA (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Virion. Host cytoplasm {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the ephemerovirus nucleocapsid protein family.
CC {ECO:0000305}.
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DR EMBL; U04166; AAA19450.1; -; Genomic_RNA.
DR EMBL; AF234533; AAG10409.1; -; Genomic_RNA.
DR RefSeq; NP_065398.1; NC_002526.1.
DR SMR; Q65474; -.
DR GeneID; 911726; -.
DR KEGG; vg:911726; -.
DR Proteomes; UP000008588; Genome.
DR GO; GO:0019029; C:helical viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0019013; C:viral nucleocapsid; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR Gene3D; 1.10.3570.10; -; 1.
DR Gene3D; 1.10.3610.10; -; 1.
DR InterPro; IPR000448; Rhabdo_ncapsid.
DR InterPro; IPR023331; Rhabdovirus_ncapsid_C.
DR InterPro; IPR023330; Rhabdovirus_ncapsid_N.
DR InterPro; IPR035961; Rhabdovirus_nucleoprotein-like.
DR Pfam; PF00945; Rhabdo_ncap; 1.
DR SUPFAM; SSF140809; SSF140809; 1.
PE 3: Inferred from homology;
KW Capsid protein; Helical capsid protein; Host cytoplasm; Phosphoprotein;
KW Reference proteome; Ribonucleoprotein; RNA-binding; Viral nucleoprotein;
KW Virion.
FT CHAIN 1..431
FT /note="Nucleoprotein"
FT /id="PRO_0000297608"
FT REGION 352..379
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 360..375
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 431 AA; 49163 MW; 906A6D17C11BA2ED CRC64;
MYCTLNKKEI KAVKPTDAIP PQYPKEFFIN GNGKKPTLRV PQGKLDLPTV RELVFGGLER
GELVLSHVIR YLYLVGERIT EKLEGDWISF GVNIGRRNQE INVWNFYEVI IEDDQTIDGR
RANNVDENDD VWLTLALLAY YRLGRSANQN HRNNLLIKLN AQIKGYRKDA PNIIDDVAVH
GSWVTNSEFC KIAAGFDMFM NRFKNNKYAH VRFGTVASRY KDAAGLMALG HACDVTGLTI
GEILDWIFVS NVGEDVVKIM EEGNEIDDPY SYMPYMMDMG ISNKSPYSSI SCPHIYTFLH
LVGTLLTSER SKHARMVSEH NLQNIKMNAF VVSYVKSNKA ALTKAFLKSE DRDYEKRQED
GSNDDEDEDE SGDDDDFGAM PKSSDPMEWF IFLESNHFIL PEKVTEFCIR ECKKIQNARP
NTIGKYLASI V