NCAP_GOGV
ID NCAP_GOGV Reviewed; 591 AA.
AC J7H5M4;
DT 31-JAN-2018, integrated into UniProtKB/Swiss-Prot.
DT 31-OCT-2012, sequence version 1.
DT 23-FEB-2022, entry version 31.
DE RecName: Full=Nucleoprotein;
DE AltName: Full=Nucleocapsid protein;
DE AltName: Full=Protein N;
GN Name=N; Synonyms=NP; OrderedLocusNames=Segment S;
OS Alethinophid 1 reptarenavirus (isolate AlRrV1/Boa/USA/BC/2009) (Golden Gate
OS virus).
OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina;
OC Ellioviricetes; Bunyavirales; Arenaviridae; Reptarenavirus.
OX NCBI_TaxID=1223562;
OH NCBI_TaxID=8574; Boa constrictor (Boa).
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=22893382; DOI=10.1128/mbio.00180-12;
RA Stenglein M.D., Sanders C., Kistler A.L., Ruby J.G., Franco J.Y.,
RA Reavill D.R., Dunker F., Derisi J.L.;
RT "Identification, characterization, and in vitro culture of highly divergent
RT arenaviruses from bosysa constrictors and annulated tree boas: candidate
RT etiological agents for snake inclusion body disease.";
RL MBio 3:1-12(2012).
CC -!- FUNCTION: Encapsidates the genome, protecting it from nucleases. The
CC encapsidated genomic RNA is termed the nucleocapsid (NC). Serves as
CC template for viral transcription and replication.
CC {ECO:0000250|UniProtKB:P09992}.
CC -!- SUBUNIT: Homomultimerizes to form the nucleocapsid. Binds to viral
CC genomic RNA. {ECO:0000250|UniProtKB:P09992}.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000250|UniProtKB:P09992}. Host
CC cytoplasm {ECO:0000250|UniProtKB:P09992}.
CC -!- SIMILARITY: Belongs to the arenaviridae nucleocapsid protein family.
CC {ECO:0000305}.
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DR EMBL; JQ717264; AFP93556.1; -; Genomic_RNA.
DR RefSeq; YP_006590091.1; NC_018483.1.
DR SMR; J7H5M4; -.
DR GeneID; 13466438; -.
DR KEGG; vg:13466438; -.
DR Proteomes; UP000134698; Genome.
DR GO; GO:0019029; C:helical viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0019013; C:viral nucleocapsid; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0039724; P:suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of IKBKE activity; IEA:UniProtKB-KW.
DR Gene3D; 3.30.420.410; -; 1.
DR InterPro; IPR035084; Nucleocapsid_C_arenaviridae.
DR InterPro; IPR038115; Nucleocapsid_C_sf.
DR InterPro; IPR035083; Nucleocapsid_N_arenaviridae.
DR Pfam; PF17290; Arena_ncap_C; 1.
DR Pfam; PF00843; Arena_nucleocap; 1.
PE 3: Inferred from homology;
KW Capsid protein; Helical capsid protein; Host cytoplasm;
KW Host-virus interaction; Inhibition of host IKBKE by virus;
KW Inhibition of host innate immune response by virus;
KW Inhibition of host RLR pathway by virus;
KW Interferon antiviral system evasion; Metal-binding; Reference proteome;
KW Ribonucleoprotein; RNA-binding; Viral immunoevasion; Viral nucleoprotein;
KW Virion; Zinc; Zinc-finger.
FT CHAIN 1..591
FT /note="Nucleoprotein"
FT /id="PRO_0000443033"
FT ZN_FING 545..570
FT /note="CHCC-type, atypical"
FT /evidence="ECO:0000250"
SQ SEQUENCE 591 AA; 66305 MW; 59859114932226DF CRC64;
MAAFQKAAVN QLALKKKLNK MLAPYQRELN NQIFKDVKAL RVGLDINKVN DTLRRLRKET
KGPNDLKNLR DLNETAAGLS GMVATQRTVE IDSSLMSDEE LIQCIENIDV IKKKAEYKGG
SRPRISEFES ETGMSKSDHE MFNKLFNRFA PKKDPGPAAF STPKSWVGIS PADLANQFGT
SPAITICLIM MRTNSPFKQI LDALHDISLL DQGMFVNASV VKAMTSQHPC LDCVEYTVPK
NSSGYNITVK AVVKAANVLS KLPKVEKLVI DDDNRVEIIR TLLTIQRELN IKIQVNEERG
LFEDIFYKIC VSPNGPCVVS IRSELTGRGW ENTIFRLRRP PPYAPRLYPD LMDLDLDALP
PVKGDKKTEE ESKIYIFKPA ADEIDEYIRS PESASSDSEI PDPRVLYMAN ACEDLFKGGD
SVFMDIEGTA QDPVEIALFN PDTGKFVHIF RMPKDKDGFK KASKHAHGLL LDDISDHPDL
QTDKNIEAFF SKVPLSARIF CQGSDIEECL KFFGRKDLKP TDCKWKREEF MKYHENILDE
LSEVFPCKHS GTVKDKKGAL TAPHCALLDC LMFSRTASGG KKTKDPTPAT I