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NCAP_GOGV
ID   NCAP_GOGV               Reviewed;         591 AA.
AC   J7H5M4;
DT   31-JAN-2018, integrated into UniProtKB/Swiss-Prot.
DT   31-OCT-2012, sequence version 1.
DT   23-FEB-2022, entry version 31.
DE   RecName: Full=Nucleoprotein;
DE   AltName: Full=Nucleocapsid protein;
DE   AltName: Full=Protein N;
GN   Name=N; Synonyms=NP; OrderedLocusNames=Segment S;
OS   Alethinophid 1 reptarenavirus (isolate AlRrV1/Boa/USA/BC/2009) (Golden Gate
OS   virus).
OC   Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina;
OC   Ellioviricetes; Bunyavirales; Arenaviridae; Reptarenavirus.
OX   NCBI_TaxID=1223562;
OH   NCBI_TaxID=8574; Boa constrictor (Boa).
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=22893382; DOI=10.1128/mbio.00180-12;
RA   Stenglein M.D., Sanders C., Kistler A.L., Ruby J.G., Franco J.Y.,
RA   Reavill D.R., Dunker F., Derisi J.L.;
RT   "Identification, characterization, and in vitro culture of highly divergent
RT   arenaviruses from bosysa constrictors and annulated tree boas: candidate
RT   etiological agents for snake inclusion body disease.";
RL   MBio 3:1-12(2012).
CC   -!- FUNCTION: Encapsidates the genome, protecting it from nucleases. The
CC       encapsidated genomic RNA is termed the nucleocapsid (NC). Serves as
CC       template for viral transcription and replication.
CC       {ECO:0000250|UniProtKB:P09992}.
CC   -!- SUBUNIT: Homomultimerizes to form the nucleocapsid. Binds to viral
CC       genomic RNA. {ECO:0000250|UniProtKB:P09992}.
CC   -!- SUBCELLULAR LOCATION: Virion {ECO:0000250|UniProtKB:P09992}. Host
CC       cytoplasm {ECO:0000250|UniProtKB:P09992}.
CC   -!- SIMILARITY: Belongs to the arenaviridae nucleocapsid protein family.
CC       {ECO:0000305}.
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DR   EMBL; JQ717264; AFP93556.1; -; Genomic_RNA.
DR   RefSeq; YP_006590091.1; NC_018483.1.
DR   SMR; J7H5M4; -.
DR   GeneID; 13466438; -.
DR   KEGG; vg:13466438; -.
DR   Proteomes; UP000134698; Genome.
DR   GO; GO:0019029; C:helical viral capsid; IEA:UniProtKB-KW.
DR   GO; GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0019013; C:viral nucleocapsid; IEA:UniProtKB-KW.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0039724; P:suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of IKBKE activity; IEA:UniProtKB-KW.
DR   Gene3D; 3.30.420.410; -; 1.
DR   InterPro; IPR035084; Nucleocapsid_C_arenaviridae.
DR   InterPro; IPR038115; Nucleocapsid_C_sf.
DR   InterPro; IPR035083; Nucleocapsid_N_arenaviridae.
DR   Pfam; PF17290; Arena_ncap_C; 1.
DR   Pfam; PF00843; Arena_nucleocap; 1.
PE   3: Inferred from homology;
KW   Capsid protein; Helical capsid protein; Host cytoplasm;
KW   Host-virus interaction; Inhibition of host IKBKE by virus;
KW   Inhibition of host innate immune response by virus;
KW   Inhibition of host RLR pathway by virus;
KW   Interferon antiviral system evasion; Metal-binding; Reference proteome;
KW   Ribonucleoprotein; RNA-binding; Viral immunoevasion; Viral nucleoprotein;
KW   Virion; Zinc; Zinc-finger.
FT   CHAIN           1..591
FT                   /note="Nucleoprotein"
FT                   /id="PRO_0000443033"
FT   ZN_FING         545..570
FT                   /note="CHCC-type, atypical"
FT                   /evidence="ECO:0000250"
SQ   SEQUENCE   591 AA;  66305 MW;  59859114932226DF CRC64;
     MAAFQKAAVN QLALKKKLNK MLAPYQRELN NQIFKDVKAL RVGLDINKVN DTLRRLRKET
     KGPNDLKNLR DLNETAAGLS GMVATQRTVE IDSSLMSDEE LIQCIENIDV IKKKAEYKGG
     SRPRISEFES ETGMSKSDHE MFNKLFNRFA PKKDPGPAAF STPKSWVGIS PADLANQFGT
     SPAITICLIM MRTNSPFKQI LDALHDISLL DQGMFVNASV VKAMTSQHPC LDCVEYTVPK
     NSSGYNITVK AVVKAANVLS KLPKVEKLVI DDDNRVEIIR TLLTIQRELN IKIQVNEERG
     LFEDIFYKIC VSPNGPCVVS IRSELTGRGW ENTIFRLRRP PPYAPRLYPD LMDLDLDALP
     PVKGDKKTEE ESKIYIFKPA ADEIDEYIRS PESASSDSEI PDPRVLYMAN ACEDLFKGGD
     SVFMDIEGTA QDPVEIALFN PDTGKFVHIF RMPKDKDGFK KASKHAHGLL LDDISDHPDL
     QTDKNIEAFF SKVPLSARIF CQGSDIEECL KFFGRKDLKP TDCKWKREEF MKYHENILDE
     LSEVFPCKHS GTVKDKKGAL TAPHCALLDC LMFSRTASGG KKTKDPTPAT I
 
 
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