NCAP_PPRV
ID NCAP_PPRV Reviewed; 525 AA.
AC Q08823;
DT 01-OCT-1994, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-1994, sequence version 1.
DT 29-SEP-2021, entry version 72.
DE RecName: Full=Nucleoprotein;
DE AltName: Full=Nucleocapsid protein;
DE Short=NP;
DE Short=Protein N;
GN Name=N; Synonyms=NP;
OS Peste-des-petits-ruminants virus (PPRV).
OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina;
OC Monjiviricetes; Mononegavirales; Paramyxoviridae; Orthoparamyxovirinae;
OC Morbillivirus.
OX NCBI_TaxID=31604;
OH NCBI_TaxID=9925; Capra hircus (Goat).
OH NCBI_TaxID=9940; Ovis aries (Sheep).
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RX PubMed=8113734; DOI=10.1099/0022-1317-75-1-233;
RA Diallo A., Barrett T., Barbron M., Meyer G., Lefevre P.C.;
RT "Cloning of the nucleocapsid protein gene of peste-des-petits-ruminants
RT virus: relationship to other morbilliviruses.";
RL J. Gen. Virol. 75:233-237(1994).
RN [2]
RP INTERACTION WITH HUMAN NR PROTEIN.
RX PubMed=14557619; DOI=10.1128/jvi.77.21.11332-11346.2003;
RA Laine D., Trescol-Biemont M.C., Longhi S., Libeau G., Marie J.C.,
RA Vidalain P.O., Azocar O., Diallo A., Canard B., Rabourdin-Combe C.,
RA Valentin H.;
RT "Measles virus (MV) nucleoprotein binds to a novel cell surface receptor
RT distinct from FcgammaRII via its C-terminal domain: role in MV-induced
RT immunosuppression.";
RL J. Virol. 77:11332-11346(2003).
CC -!- FUNCTION: Encapsidates the genome in a ratio of 1 N per 6
CC ribonucleotides, protecting it from nucleases. The nucleocapsid (NC)
CC has a helical structure. The encapsidated genomic RNA is termed the NC
CC and serves as template for transcription and replication. During
CC replication, encapsidation by N is coupled to RNA synthesis and all
CC replicative products are resistant to nucleases. N is released in the
CC blood following lysis of infected cells, it interacts then probably
CC with FCGR2B on immune cells, inducing apoptosis and blocking
CC inflammatory immune response. Ntail binds to a protein on thymic
CC epithelial cells, termed Nucleoprotein Receptor (NR), inducing growth
CC arrest (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Homomultimerizes to form the nucleocapsid. Binds to viral
CC genomic RNA. In nucleocapsid, binds the P protein and thereby positions
CC the polymerase on the template. Interacts with human FCGR2B protein ex
CC vivo (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}. Host cytoplasm.
CC -!- DOMAIN: Ncore is globular and carries regions required for N self-
CC assembly and RNA-binding. Ntail is an intrinsically disordered
CC monomeric domain (By similarity). {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the paramyxoviruses nucleocapsid family.
CC {ECO:0000305}.
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DR EMBL; X74443; CAA52454.1; -; mRNA.
DR PIR; S36405; S36405.
DR SMR; Q08823; -.
DR Proteomes; UP000180906; Genome.
DR GO; GO:0019029; C:helical viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0019013; C:viral nucleocapsid; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR InterPro; IPR002021; Paramyx_ncap.
DR Pfam; PF00973; Paramyxo_ncap; 1.
PE 1: Evidence at protein level;
KW Capsid protein; Helical capsid protein; Host cytoplasm;
KW Host-virus interaction; Ribonucleoprotein; RNA-binding;
KW Viral nucleoprotein; Virion.
FT CHAIN 1..525
FT /note="Nucleoprotein"
FT /id="PRO_0000142674"
FT REGION 1..400
FT /note="Ncore"
FT /evidence="ECO:0000250"
FT REGION 401..525
FT /note="Ntail"
FT /evidence="ECO:0000250"
FT REGION 418..492
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 506..525
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 442..459
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 525 AA; 58032 MW; 079E477792E95D9C CRC64;
MATLLKSLAL FKRNKDKAPT ASGSGGAIRG IKNVIIVPIP GDSSIITRSR LLDRLVRLAG
DPDINGSKLT GVMISMLSLF VESPGQLIQR ITDDPDVSIR LVEVVQSTRS QSGLTFASRG
ADLDNEADMY FSTEGPSSGS KKRINWFENR EIIDIEVQDA EEFNMLLASI LAQVWILLAK
AVTAPDTAAD SELRRWVKYT QQRRVIGEFR LDKGWLDAVR NRIAEDLSLR RFMVSLILDI
KRTPGNKPRI AEMICDIDNY IVEAGLASFI LTIKFGIETM YPALGLHEFA GELSTIESLM
NLYQQLGEVA PYMVILENSI QNKFSAGAYP LLWSYAMGVG VELENSMGGL NFGRSYFDPA
YFRLGQEMVR RSAGKVSSVI AAELGITAEE AKLVSEIASQ TGDERTVRGT GPRQAQVSFL
QHKTDEGESP TPATREEVKA AIPNGSEGRD TKRTRSGKPR GETPGQLLPE IMQEDELSRE
SSQNPREAQR SAEALFRLQA MAKILEDQEE GEDNSQIYND KDLLS