NCAP_RINDR
ID NCAP_RINDR Reviewed; 525 AA.
AC Q03332;
DT 01-JUN-1994, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-1994, sequence version 1.
DT 23-FEB-2022, entry version 79.
DE RecName: Full=Nucleoprotein;
DE AltName: Full=Nucleocapsid protein;
DE Short=NP;
DE Short=Protein N;
GN Name=N; Synonyms=NP;
OS Rinderpest virus (strain RBOK) (RDV).
OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina;
OC Monjiviricetes; Mononegavirales; Paramyxoviridae; Orthoparamyxovirinae;
OC Morbillivirus.
OX NCBI_TaxID=36409;
OH NCBI_TaxID=9915; Bos indicus (Zebu).
OH NCBI_TaxID=9913; Bos taurus (Bovine).
OH NCBI_TaxID=89462; Bubalus bubalis (Domestic water buffalo).
OH NCBI_TaxID=9925; Capra hircus (Goat).
OH NCBI_TaxID=9933; Gazella (gazelles).
OH NCBI_TaxID=9894; Giraffa camelopardalis (Giraffe).
OH NCBI_TaxID=9832; Hippopotamus.
OH NCBI_TaxID=9940; Ovis aries (Sheep).
OH NCBI_TaxID=9821; Suidae (pigs).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX PubMed=8429304; DOI=10.1099/0022-1317-74-2-299;
RA Baron M.D., Shaila M.S., Barrett T.;
RT "Cloning and sequence analysis of the phosphoprotein gene of rinderpest
RT virus.";
RL J. Gen. Virol. 74:299-304(1993).
CC -!- FUNCTION: Encapsidates the genome in a ratio of 1 N per 6
CC ribonucleotides, protecting it from nucleases. The nucleocapsid (NC)
CC has a helical structure. The encapsidated genomic RNA is termed the NC
CC and serves as template for transcription and replication. During
CC replication, encapsidation by N is coupled to RNA synthesis and all
CC replicative products are resistant to nucleases.
CC -!- SUBUNIT: Homomultimerizes to form the nucleocapsid. Binds to viral
CC genomic RNA. In nucleocapsid, binds the P protein and thereby positions
CC the polymerase on the template (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}. Host cytoplasm
CC {ECO:0000250}.
CC -!- DOMAIN: Ncore is globular and carries regions required for N self-
CC assembly and RNA-binding. Ntail is an intrinsically disordered
CC monomeric domain (By similarity). {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the paramyxoviruses nucleocapsid family.
CC {ECO:0000305}.
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DR EMBL; X68311; CAA48388.1; -; Genomic_RNA.
DR EMBL; Z30697; CAA83177.1; -; Genomic_RNA.
DR PIR; S24791; S24791.
DR SMR; Q03332; -.
DR Proteomes; UP000008654; Genome.
DR GO; GO:0019029; C:helical viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0019013; C:viral nucleocapsid; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR InterPro; IPR002021; Paramyx_ncap.
DR Pfam; PF00973; Paramyxo_ncap; 1.
PE 3: Inferred from homology;
KW Capsid protein; Helical capsid protein; Host cytoplasm; Ribonucleoprotein;
KW RNA-binding; Viral nucleoprotein; Virion.
FT CHAIN 1..525
FT /note="Nucleoprotein"
FT /id="PRO_0000142677"
FT REGION 1..400
FT /note="Ncore"
FT /evidence="ECO:0000250"
FT REGION 401..525
FT /note="Ntail"
FT /evidence="ECO:0000250"
FT REGION 403..472
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 403..427
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 428..463
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 525 AA; 58054 MW; 70678FD33877C428 CRC64;
MASLLKSLAL FKRAKDKPPL AAGSGGAIRG IKHVIVVPIP GDSSITTRSR LLDRLVKMVG
DPDISGPKLT GALISILSLF VESPGQLIQR ITDDPDISIK LVEVVQSDKT QSGLTFASRG
TSMDDEADRY FTYEEPNDGE ERQSYWFENR DIQDIEIQDP EGFNMILATI LAQIWILLAK
AVTAPDTAAE SELRRWVKYT QQRRVIGEFR LDKGWLDTVR NRVAEDLSLR RFMVALILDI
KRTPGNKPRI AEMICDIDTY IVEAGLASFI LTIKFGIETM YPALGLHEFA GELSTIESLM
NLYQQMGELA PYMVILENSI QNKFSAGAYP LLWSYAMGIG VELENSMGGL NFGRSYFDPA
YFRLGQEMVR RSAGKVSSNL ASELGITEEE ARLVSEIAAY TSDDRNNRTS GPKQAQVSFL
RTDQGSEAQH SASKKDEARA PQVKKETRTS SKSDKHKEGT DKEPVSSSAM TLIDVDTTLE
ADTDPLESKK SAEALLRLQA MAGILGDSTL GNDSLRAYND KDILN