NCAP_RINDU
ID NCAP_RINDU Reviewed; 525 AA.
AC P41359;
DT 01-FEB-1995, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1995, sequence version 1.
DT 02-JUN-2021, entry version 67.
DE RecName: Full=Nucleoprotein;
DE AltName: Full=Nucleocapsid protein;
DE Short=NP;
DE Short=Protein N;
GN Name=N; Synonyms=NP;
OS Rinderpest virus (strain Kuwait 82/1) (RDV).
OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina;
OC Monjiviricetes; Mononegavirales; Paramyxoviridae; Orthoparamyxovirinae;
OC Morbillivirus.
OX NCBI_TaxID=39006;
OH NCBI_TaxID=9915; Bos indicus (Zebu).
OH NCBI_TaxID=9913; Bos taurus (Bovine).
OH NCBI_TaxID=89462; Bubalus bubalis (Domestic water buffalo).
OH NCBI_TaxID=9925; Capra hircus (Goat).
OH NCBI_TaxID=9933; Gazella (gazelles).
OH NCBI_TaxID=9894; Giraffa camelopardalis (Giraffe).
OH NCBI_TaxID=9832; Hippopotamus.
OH NCBI_TaxID=9940; Ovis aries (Sheep).
OH NCBI_TaxID=9821; Suidae (pigs).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX PubMed=7897350; DOI=10.1099/0022-1317-76-3-593;
RA Baron M.D., Barrett T.;
RT "Sequencing and analysis of the nucleocapsid (N) and polymerase (L) genes
RT and the terminal extragenic domains of the vaccine strain of rinderpest
RT virus.";
RL J. Gen. Virol. 76:593-602(1995).
CC -!- FUNCTION: Encapsidates the genome in a ratio of 1 N per 6
CC ribonucleotides, protecting it from nucleases. The nucleocapsid (NC)
CC has a helical structure. The encapsidated genomic RNA is termed the NC
CC and serves as template for transcription and replication. During
CC replication, encapsidation by N is coupled to RNA synthesis and all
CC replicative products are resistant to nucleases.
CC -!- SUBUNIT: Homomultimerizes to form the nucleocapsid. Binds to viral
CC genomic RNA. In nucleocapsid, binds the P protein and thereby positions
CC the polymerase on the template (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}. Host cytoplasm
CC {ECO:0000250}.
CC -!- DOMAIN: Ncore is globular and carries regions required for N self-
CC assembly and RNA-binding. Ntail is an intrinsically disordered
CC monomeric domain (By similarity). {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the paramyxoviruses nucleocapsid family.
CC {ECO:0000305}.
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DR EMBL; Z34262; CAA84017.1; -; Genomic_RNA.
DR PIR; S47308; S47308.
DR SMR; P41359; -.
DR GO; GO:0019029; C:helical viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0019013; C:viral nucleocapsid; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR InterPro; IPR002021; Paramyx_ncap.
DR Pfam; PF00973; Paramyxo_ncap; 1.
PE 3: Inferred from homology;
KW Capsid protein; Helical capsid protein; Host cytoplasm; Ribonucleoprotein;
KW RNA-binding; Viral nucleoprotein; Virion.
FT CHAIN 1..525
FT /note="Nucleoprotein"
FT /id="PRO_0000142678"
FT REGION 1..400
FT /note="Ncore"
FT /evidence="ECO:0000250"
FT REGION 401..525
FT /note="Ntail"
FT /evidence="ECO:0000250"
FT REGION 402..490
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 506..525
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 402..429
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 430..465
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 525 AA; 58253 MW; 9AD1BD2699AB1F00 CRC64;
MASLLKSLAL FKKNKDKPPL AAGSGGAIRG IKHVIIVPIP GDSSITTRSR LLDRLVKMVG
DPDISGPKLT GALISILSLF VESPGQLIQR ITDDPDISIK LVEVVQSDKT QSGLTFASRG
TSMDDEADRY FTYDEPNDGE ERQSYWFENR EIQDIEVQDP EGFNMILATI LAQIWILLAK
AVTAPDTAAD SELRRWVKYT QQRRVIGEFK LDKGWLDTVR NRIAEDLSLR RFMVALILDI
KRTPGNKPRI AEMICDIDTY IVEAGLASFI LTIKFGIETM YPALGLHEFA GELSTIESLM
NLYQQMGELA PYMVILENSI QNKFSAGAYP LLWSYAMGVG VELENSMGGL NFGRSYFDPA
YFRLGQEMVR RSAGKVSSNL ASELGITEEE ARLVSEIAAY TGDDRNNRTS GPKQAQVSFL
RTDQGGETQN NASKRDEARA PQIRKEARTS SKSDKYKEDT DKEPMSPSVK TLIDVDTTPE
VDTDPLGSKK SAEALIRLQA MASILEDSTF GNDSPRAYND RDLLS