NCAP_RSVT
ID NCAP_RSVT Reviewed; 322 AA.
AC P68559; P26657;
DT 23-NOV-2004, integrated into UniProtKB/Swiss-Prot.
DT 07-DEC-2004, sequence version 2.
DT 23-FEB-2022, entry version 50.
DE RecName: Full=Nucleoprotein;
DE AltName: Full=Coat protein;
DE Short=CP;
DE AltName: Full=Nucleocapsid protein;
DE Short=Protein N;
DE AltName: Full=Protein pc3;
GN ORFNames=pc3;
OS Rice stripe virus (isolate T) (RSV).
OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina;
OC Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus.
OX NCBI_TaxID=36394;
OH NCBI_TaxID=4498; Avena sativa (Oat).
OH NCBI_TaxID=66017; Digitaria.
OH NCBI_TaxID=38413; Eragrostis.
OH NCBI_TaxID=4513; Hordeum vulgare (Barley).
OH NCBI_TaxID=4530; Oryza sativa (Rice).
OH NCBI_TaxID=4555; Setaria italica (Foxtail millet) (Panicum italicum).
OH NCBI_TaxID=4556; Setaria viridis (Green bristlegrass) (Setaria italica subsp. viridis).
OH NCBI_TaxID=4565; Triticum aestivum (Wheat).
OH NCBI_TaxID=4577; Zea mays (Maize).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA], AND PROTEIN SEQUENCE OF 143-156 AND
RP 221-228.
RX PubMed=2016591; DOI=10.1099/0022-1317-72-4-763;
RA Zhu Y., Hayakawa T., Toriyama S., Takahashi M.;
RT "Complete nucleotide sequence of RNA 3 of rice stripe virus: an ambisense
RT coding strategy.";
RL J. Gen. Virol. 72:763-767(1991).
RN [2]
RP SUBCELLULAR LOCATION.
RX PubMed=16025247; DOI=10.1007/s11262-005-1798-6;
RA Liang D., Qu Z., Ma X., Hull R.;
RT "Detection and localization of Rice stripe virus gene products in vivo.";
RL Virus Genes 31:211-221(2005).
RN [3]
RP RNA-BINDING.
RX PubMed=16025246; DOI=10.1007/s11262-005-1797-7;
RA Liang D., Ma X., Qu Z., Hull R.;
RT "Nucleic acid binding property of the gene products of rice stripe virus.";
RL Virus Genes 31:203-209(2005).
CC -!- FUNCTION: Encapsidates the genome, protecting it from nucleases. The
CC encapsidated genomic RNA is termed the nucleocapsid (NC), and serves as
CC template for viral transcription and replication.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000269|PubMed:16025247}. Host
CC cytoplasm {ECO:0000269|PubMed:16025247}.
CC -!- SIMILARITY: Belongs to the tenuiviruses nucleocapsid protein family.
CC {ECO:0000305}.
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DR EMBL; X53563; CAA37635.1; -; Genomic_RNA.
DR RefSeq; NP_620548.1; NC_003776.1.
DR SMR; P68559; -.
DR GeneID; 962687; -.
DR KEGG; vg:962687; -.
DR Proteomes; UP000006677; Genome.
DR GO; GO:0019029; C:helical viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0019013; C:viral nucleocapsid; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR InterPro; IPR009522; Capsid_Phlebovir/Tenuivir.
DR InterPro; IPR008864; Nucleocapsid_Tenuivirus.
DR Pfam; PF05733; Tenui_N; 1.
DR PIRSF; PIRSF004108; Tenuivirus_N; 1.
PE 1: Evidence at protein level;
KW Capsid protein; Direct protein sequencing; Helical capsid protein;
KW Host cytoplasm; Reference proteome; RNA-binding; Viral nucleoprotein;
KW Virion.
FT CHAIN 1..322
FT /note="Nucleoprotein"
FT /id="PRO_0000222522"
FT REGION 201..322
FT /note="RNA-binding"
SQ SEQUENCE 322 AA; 35134 MW; 4F56E88818C9D98B CRC64;
MGTNKPATLA DLQKAINDIS KDALSYLTAH KADVVTFAGQ IEYAGYDAAT LIGILKDKGG
DTLAKDMTMC ITMRYVRGTG FVRDVTKKVK VAAGSTEAST LVSRYGIVSS VGTNANAITL
GRLAQLFPNV SHEVVRQISG VKMAVDSSDL GLTGCDNLLW DYVPQYIKLE SETAPYCSTH
SLSHILFVVH IIHSFQITKK TMPEGKKKER GLTKDIDMMK YTTGLLVITC KSKNLSDKKK
EEGRKKVLDE FITNGKVKTT IFDALAGMSV NTISTYGNQT RLYLAQQSKL MKILAENTSK
TATEVSGLVK EFFEDEAEGA DD
