NCAP_TIBVC
ID NCAP_TIBVC Reviewed; 428 AA.
AC D8V070;
DT 04-MAR-2015, integrated into UniProtKB/Swiss-Prot.
DT 05-OCT-2010, sequence version 1.
DT 29-SEP-2021, entry version 37.
DE RecName: Full=Nucleoprotein;
DE Short=NP;
DE AltName: Full=Nucleocapsid protein;
DE Short=Protein N;
GN Name=N;
OS Tibrogargan virus (strain CS132) (TIBV).
OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina;
OC Monjiviricetes; Mononegavirales; Rhabdoviridae; Alpharhabdovirinae;
OC Tibrovirus.
OX NCBI_TaxID=1559361;
OH NCBI_TaxID=9913; Bos taurus (Bovine).
OH NCBI_TaxID=469753; Culicoides brevitarsis.
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RC STRAIN=CS132;
RX PubMed=21593274; DOI=10.1099/vir.0.026120-0;
RA Gubala A., Davis S., Weir R., Melville L., Cowled C., Boyle D.;
RT "Tibrogargan and Coastal Plains rhabdoviruses: genomic characterization,
RT evolution of novel genes and seroprevalence in Australian livestock.";
RL J. Gen. Virol. 92:2160-2170(2011).
CC -!- FUNCTION: Encapsidates the genome, protecting it from nucleases. The
CC encapsidated genomic RNA is termed the NC and serves as template for
CC transcription and replication. Nucleocapsid assembly is concommitant
CC with replication, therefore viral replication depends on the
CC intracellular concentration of free N, termed N(0). All replicative
CC products are resistant to nucleases. {ECO:0000250|UniProtKB:P03521}.
CC -!- SUBUNIT: Homomultimerizes to form the nucleocapsid. Binds to viral
CC genomic RNA. N in nucleocapsid binds the P protein and thereby
CC positions the polymerase on the template. Interaction of N(0) with the
CC P protein prevents the uncontrolled aggregation of N(0).
CC {ECO:0000250|UniProtKB:P03521}.
CC -!- SUBCELLULAR LOCATION: Virion. Host cytoplasm. Note=The nucleocapsid is
CC synthesized in the cytoplasm, and is subsequently transported via
CC microtubules to the cell periphery. {ECO:0000250|UniProtKB:P03521}.
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DR EMBL; GQ294472; ADG86347.1; -; Viral_cRNA.
DR RefSeq; YP_007641368.1; NC_020804.1.
DR SMR; D8V070; -.
DR GeneID; 14857906; -.
DR KEGG; vg:14857906; -.
DR Proteomes; UP000029770; Genome.
DR GO; GO:0019029; C:helical viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0019013; C:viral nucleocapsid; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR Gene3D; 1.10.3570.10; -; 1.
DR Gene3D; 1.10.3610.10; -; 1.
DR InterPro; IPR000448; Rhabdo_ncapsid.
DR InterPro; IPR023331; Rhabdovirus_ncapsid_C.
DR InterPro; IPR023330; Rhabdovirus_ncapsid_N.
DR InterPro; IPR035961; Rhabdovirus_nucleoprotein-like.
DR Pfam; PF00945; Rhabdo_ncap; 1.
DR SUPFAM; SSF140809; SSF140809; 1.
PE 3: Inferred from homology;
KW Capsid protein; Helical capsid protein; Host cytoplasm; Reference proteome;
KW Ribonucleoprotein; RNA-binding; Viral nucleoprotein; Viral RNA replication;
KW Virion.
FT CHAIN 1..428
FT /note="Nucleoprotein"
FT /id="PRO_0000432066"
SQ SEQUENCE 428 AA; 48688 MW; 7969FE9EC6CEF5DD CRC64;
MHCLVTSTSI KLTAPSDTID VQYCSDYFEK NNKQKPKINL PKLPVGLAEL RALVKGGFKA
NDLKLQHVLA YLGHLLQDIK GELTEDWTSF GVLIGNRSHN ITPLDLLDVN YYDDKLLDGV
KANDASQSDD AWMLFACLGI YRLARTQNLQ HRSSILMKMN AQILSLNQNA IKLVDNTMFY
NSWISNYNYT KLIAACDMFF YKFKDHEHAV CRFGTIPSRW KDCGGLTSLS HLKNLTGMEL
EEIVSWVFVP SIGKEICRMM KSGQELDKPD SYVPYMMDLG LSMKSPYSSS ANGGTYTWIH
MIGSIMHSQR SLHARMVNEN ELPNIRISAM LTAYVKFNKG SLMKVFVKEE DKHLYIGEDQ
DENEGNGSDY IDLTQHPNTD SADDWYQWLE INNFTLDDII KDSITRECKK IQNTRAGTIG
SYIQTTLS