NDADB_ARATH
ID NDADB_ARATH Reviewed; 143 AA.
AC O49313;
DT 28-JUN-2011, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-1998, sequence version 1.
DT 03-AUG-2022, entry version 114.
DE RecName: Full=NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B;
GN OrderedLocusNames=At2g33220; ORFNames=F25I18.4;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Accessory subunit of the mitochondrial membrane respiratory
CC chain NADH dehydrogenase (Complex I), that is believed not to be
CC involved in catalysis. Complex I functions in the transfer of electrons
CC from NADH to the respiratory chain. The immediate electron acceptor for
CC the enzyme is believed to be ubiquinone (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Complex I is composed of at least 49 different subunits.
CC -!- SUBCELLULAR LOCATION: Mitochondrion inner membrane {ECO:0000250};
CC Single-pass membrane protein {ECO:0000250}; Matrix side {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the complex I NDUFA13 subunit family.
CC {ECO:0000305}.
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DR EMBL; AC002334; AAC04901.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC08801.1; -; Genomic_DNA.
DR EMBL; AY065249; AAL38725.1; -; mRNA.
DR EMBL; AY091317; AAM14256.1; -; mRNA.
DR EMBL; AY088795; AAM67106.1; -; mRNA.
DR PIR; G84742; G84742.
DR RefSeq; NP_565761.1; NM_128881.4.
DR AlphaFoldDB; O49313; -.
DR SMR; O49313; -.
DR BioGRID; 3231; 10.
DR IntAct; O49313; 2.
DR STRING; 3702.AT2G33220.1; -.
DR PaxDb; O49313; -.
DR PRIDE; O49313; -.
DR ProteomicsDB; 251301; -.
DR EnsemblPlants; AT2G33220.1; AT2G33220.1; AT2G33220.
DR GeneID; 817884; -.
DR Gramene; AT2G33220.1; AT2G33220.1; AT2G33220.
DR KEGG; ath:AT2G33220; -.
DR Araport; AT2G33220; -.
DR TAIR; locus:2046575; AT2G33220.
DR eggNOG; KOG3300; Eukaryota.
DR HOGENOM; CLU_119720_2_0_1; -.
DR InParanoid; O49313; -.
DR OMA; GFRPAAY; -.
DR PhylomeDB; O49313; -.
DR BioCyc; ARA:AT2G33220-MON; -.
DR BioCyc; MetaCyc:AT2G33220-MON; -.
DR PRO; PR:O49313; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; O49313; baseline and differential.
DR Genevisible; O49313; AT.
DR GO; GO:0005783; C:endoplasmic reticulum; HDA:TAIR.
DR GO; GO:0031966; C:mitochondrial membrane; IDA:TAIR.
DR GO; GO:0005747; C:mitochondrial respiratory chain complex I; IDA:TAIR.
DR GO; GO:0005739; C:mitochondrion; IDA:TAIR.
DR GO; GO:0045271; C:respiratory chain complex I; IDA:TAIR.
DR GO; GO:0009853; P:photorespiration; TAS:TAIR.
DR InterPro; IPR009346; GRIM-19.
DR PANTHER; PTHR12966; PTHR12966; 1.
DR Pfam; PF06212; GRIM-19; 1.
PE 2: Evidence at transcript level;
KW Electron transport; Membrane; Mitochondrion; Mitochondrion inner membrane;
KW Reference proteome; Respiratory chain; Transmembrane; Transmembrane helix;
KW Transport.
FT CHAIN 1..143
FT /note="NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
FT subunit 13-B"
FT /id="PRO_0000410936"
FT TRANSMEM 43..65
FT /note="Helical"
FT /evidence="ECO:0000255"
SQ SEQUENCE 143 AA; 16122 MW; 29B88ECDBF1B8E8A CRC64;
MTEAMIRKKP GMASVKDMPL LQDGPPPGGF APVRYARRIS NTGPSAMAIF LTVSGAFAWG
MYQVGQGNKI RRALKEEKYA ARRAILPILQ AEEDERFVSE WKKYLEYEAD VMKDVPGWKV
GENVYNSGRW MPPATGELRP DVW
