NDB3A_ARATH
ID NDB3A_ARATH Reviewed; 72 AA.
AC O64725;
DT 27-JUL-2011, integrated into UniProtKB/Swiss-Prot.
DT 01-AUG-1998, sequence version 1.
DT 03-AUG-2022, entry version 105.
DE RecName: Full=NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-A;
GN OrderedLocusNames=At2g02510; ORFNames=T8K22.19;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (SEP-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Accessory subunit of the mitochondrial membrane respiratory
CC chain NADH dehydrogenase (Complex I), that is believed not to be
CC involved in catalysis. Complex I functions in the transfer of electrons
CC from NADH to the respiratory chain. The immediate electron acceptor for
CC the enzyme is believed to be ubiquinone (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Complex I is composed of at least 49 different subunits.
CC -!- SUBCELLULAR LOCATION: Mitochondrion inner membrane {ECO:0000250};
CC Single-pass membrane protein {ECO:0000250}; Matrix side {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the complex I NDUFB3 subunit family.
CC {ECO:0000305}.
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DR EMBL; AC004136; AAC18935.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC05589.1; -; Genomic_DNA.
DR EMBL; AY065171; AAL38347.1; -; mRNA.
DR EMBL; AY114592; AAM47911.1; -; mRNA.
DR EMBL; AK176744; BAD44507.1; -; mRNA.
DR PIR; T00612; T00612.
DR RefSeq; NP_178355.1; NM_126306.5.
DR PDB; 7AQW; EM; 3.17 A; k=1-72.
DR PDB; 7AR7; EM; 3.72 A; k=4-50.
DR PDB; 7AR8; EM; 3.53 A; k=1-72.
DR PDB; 7ARB; EM; 3.41 A; k=1-72.
DR PDBsum; 7AQW; -.
DR PDBsum; 7AR7; -.
DR PDBsum; 7AR8; -.
DR PDBsum; 7ARB; -.
DR AlphaFoldDB; O64725; -.
DR SMR; O64725; -.
DR BioGRID; 183; 1.
DR IntAct; O64725; 1.
DR STRING; 3702.AT2G02510.1; -.
DR PaxDb; O64725; -.
DR PRIDE; O64725; -.
DR ProteomicsDB; 251122; -.
DR EnsemblPlants; AT2G02510.1; AT2G02510.1; AT2G02510.
DR GeneID; 814780; -.
DR Gramene; AT2G02510.1; AT2G02510.1; AT2G02510.
DR KEGG; ath:AT2G02510; -.
DR Araport; AT2G02510; -.
DR TAIR; locus:2065243; AT2G02510.
DR eggNOG; ENOG502S7DZ; Eukaryota.
DR HOGENOM; CLU_145518_3_0_1; -.
DR InParanoid; O64725; -.
DR OMA; ANNLRHA; -.
DR OrthoDB; 1568057at2759; -.
DR PhylomeDB; O64725; -.
DR PRO; PR:O64725; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; O64725; baseline and differential.
DR Genevisible; O64725; AT.
DR GO; GO:0005747; C:mitochondrial respiratory chain complex I; IDA:TAIR.
DR GO; GO:0005739; C:mitochondrion; HDA:TAIR.
DR GO; GO:0022900; P:electron transport chain; IEA:InterPro.
DR GO; GO:0032981; P:mitochondrial respiratory chain complex I assembly; IBA:GO_Central.
DR InterPro; IPR012576; NDUFB3.
DR PANTHER; PTHR15082; PTHR15082; 1.
DR Pfam; PF08122; NDUF_B12; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Electron transport; Membrane; Mitochondrion;
KW Mitochondrion inner membrane; Reference proteome; Respiratory chain;
KW Transmembrane; Transmembrane helix; Transport.
FT CHAIN 1..72
FT /note="NADH dehydrogenase [ubiquinone] 1 beta subcomplex
FT subunit 3-A"
FT /id="PRO_0000410995"
FT TRANSMEM 31..48
FT /note="Helical"
FT /evidence="ECO:0000255"
FT HELIX 6..15
FT /evidence="ECO:0007829|PDB:7AQW"
FT TURN 16..20
FT /evidence="ECO:0007829|PDB:7AQW"
FT HELIX 22..25
FT /evidence="ECO:0007829|PDB:7AQW"
FT HELIX 28..30
FT /evidence="ECO:0007829|PDB:7AQW"
FT HELIX 35..49
FT /evidence="ECO:0007829|PDB:7AQW"
SQ SEQUENCE 72 AA; 8051 MW; 0A946E0EA2FE28C7 CRC64;
MAKPLGTTGE FFRRRDEWRK HPMLSNQMRH ALPGIGIGVG AFCVYLVGEQ IYSKLMAPSS
QSSHQKQPAP SH