NDBAB_ARATH
ID NDBAB_ARATH Reviewed; 106 AA.
AC Q94C12; Q9LS49;
DT 28-JUN-2011, integrated into UniProtKB/Swiss-Prot.
DT 01-DEC-2001, sequence version 1.
DT 03-AUG-2022, entry version 100.
DE RecName: Full=NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B;
GN OrderedLocusNames=At3g18410; ORFNames=MYF24_12;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10819329; DOI=10.1093/dnares/7.2.131;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence
RT features of the regions of 4,504,864 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:131-135(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Accessory subunit of the mitochondrial membrane respiratory
CC chain NADH dehydrogenase (Complex I), that is believed not to be
CC involved in catalysis. Complex I functions in the transfer of electrons
CC from NADH to the respiratory chain. The immediate electron acceptor for
CC the enzyme is believed to be ubiquinone (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Complex I is composed of at least 49 different subunits.
CC -!- SUBCELLULAR LOCATION: Mitochondrion inner membrane {ECO:0000250};
CC Peripheral membrane protein {ECO:0000250}; Matrix side {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the complex I NDUFB10 subunit family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAB01107.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AB026658; BAB01107.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002686; AEE76093.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE76094.1; -; Genomic_DNA.
DR EMBL; AY037256; AAK59857.1; -; mRNA.
DR EMBL; AY077662; AAL76140.1; -; mRNA.
DR EMBL; AY088400; AAM65938.1; -; mRNA.
DR RefSeq; NP_001118655.1; NM_001125183.2.
DR RefSeq; NP_566608.1; NM_112726.4.
DR PDB; 7AQW; EM; 3.17 A; p=1-106.
DR PDB; 7AR7; EM; 3.72 A; p=2-94.
DR PDB; 7AR8; EM; 3.53 A; p=1-106.
DR PDB; 7ARB; EM; 3.41 A; p=1-106.
DR PDBsum; 7AQW; -.
DR PDBsum; 7AR7; -.
DR PDBsum; 7AR8; -.
DR PDBsum; 7ARB; -.
DR AlphaFoldDB; Q94C12; -.
DR SMR; Q94C12; -.
DR IntAct; Q94C12; 1.
DR STRING; 3702.AT3G18410.1; -.
DR PaxDb; Q94C12; -.
DR PRIDE; Q94C12; -.
DR ProteomicsDB; 251285; -.
DR EnsemblPlants; AT3G18410.1; AT3G18410.1; AT3G18410.
DR EnsemblPlants; AT3G18410.2; AT3G18410.2; AT3G18410.
DR GeneID; 821370; -.
DR Gramene; AT3G18410.1; AT3G18410.1; AT3G18410.
DR Gramene; AT3G18410.2; AT3G18410.2; AT3G18410.
DR KEGG; ath:AT3G18410; -.
DR Araport; AT3G18410; -.
DR TAIR; locus:2095022; AT3G18410.
DR eggNOG; KOG4009; Eukaryota.
DR HOGENOM; CLU_145724_0_0_1; -.
DR InParanoid; Q94C12; -.
DR OMA; YVEFDES; -.
DR OrthoDB; 1597363at2759; -.
DR PhylomeDB; Q94C12; -.
DR PRO; PR:Q94C12; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q94C12; baseline and differential.
DR Genevisible; Q94C12; AT.
DR GO; GO:0005829; C:cytosol; HDA:TAIR.
DR GO; GO:0031966; C:mitochondrial membrane; IDA:TAIR.
DR GO; GO:0005747; C:mitochondrial respiratory chain complex I; IDA:TAIR.
DR GO; GO:0005739; C:mitochondrion; IDA:TAIR.
DR GO; GO:0045271; C:respiratory chain complex I; IDA:TAIR.
DR GO; GO:0009853; P:photorespiration; TAS:TAIR.
DR InterPro; IPR019377; NADH_UbQ_OxRdtase_su10.
DR InterPro; IPR039993; NDUFB10.
DR PANTHER; PTHR13094; PTHR13094; 1.
DR Pfam; PF10249; NDUFB10; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Electron transport; Membrane; Mitochondrion;
KW Mitochondrion inner membrane; Reference proteome; Respiratory chain;
KW Transport.
FT CHAIN 1..106
FT /note="NADH dehydrogenase [ubiquinone] 1 beta subcomplex
FT subunit 10-B"
FT /id="PRO_0000410680"
FT REGION 1..25
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT STRAND 5..7
FT /evidence="ECO:0007829|PDB:7AQW"
FT STRAND 22..25
FT /evidence="ECO:0007829|PDB:7AQW"
FT HELIX 27..62
FT /evidence="ECO:0007829|PDB:7AQW"
FT HELIX 66..69
FT /evidence="ECO:0007829|PDB:7AQW"
FT HELIX 71..79
FT /evidence="ECO:0007829|PDB:7AQW"
FT TURN 81..83
FT /evidence="ECO:0007829|PDB:7ARB"
FT STRAND 85..89
FT /evidence="ECO:0007829|PDB:7AQW"
SQ SEQUENCE 106 AA; 12438 MW; 3C9FD2B44C9333F8 CRC64;
MGRKKGLPEF EESAPDGFDP ENPYKDPVAM VEMREHIVRE KWIQIEKAKI LREKVKWCYR
VEGVNHYQKC RHLVQQYLDS TRGVGWGKDH RPISLHGPKP EAVEAE