NG06_SCHPO
ID NG06_SCHPO Reviewed; 1315 AA.
AC Q9URX8; Q9UU05;
DT 01-FEB-2005, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-2005, sequence version 3.
DT 03-AUG-2022, entry version 119.
DE RecName: Full=Probable nucleoporin C890.06;
GN ORFNames=SPAC890.06;
OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
OC Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae;
OC Schizosaccharomyces.
OX NCBI_TaxID=284812;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=972 / ATCC 24843;
RX PubMed=11859360; DOI=10.1038/nature724;
RA Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A.,
RA Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S.,
RA Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.,
RA Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S.,
RA Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S.,
RA Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D.,
RA Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P.,
RA Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K.,
RA O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M.,
RA Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N.,
RA Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A.,
RA Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R.,
RA Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M.,
RA Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A.,
RA Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A.,
RA Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H.,
RA Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S.,
RA Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C.,
RA Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A.,
RA Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M.,
RA del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S.,
RA Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R.,
RA Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G.,
RA Nurse P.;
RT "The genome sequence of Schizosaccharomyces pombe.";
RL Nature 415:871-880(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA] OF 708-891, AND SUBCELLULAR
RP LOCATION.
RC STRAIN=ATCC 38364 / 968;
RX PubMed=10759889; DOI=10.1046/j.1365-2443.2000.00317.x;
RA Ding D.-Q., Tomita Y., Yamamoto A., Chikashige Y., Haraguchi T.,
RA Hiraoka Y.;
RT "Large-scale screening of intracellular protein localization in living
RT fission yeast cells by the use of a GFP-fusion genomic DNA library.";
RL Genes Cells 5:169-190(2000).
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000269|PubMed:10759889}. Nucleus
CC {ECO:0000269|PubMed:10759889}. Note=Nuclear rim.
CC -!- SIMILARITY: Belongs to the non-repetitive/WGA-negative nucleoporin
CC family. {ECO:0000305}.
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DR EMBL; CU329670; CAB63497.1; -; Genomic_DNA.
DR EMBL; AB027888; BAA87192.1; -; Genomic_DNA.
DR PIR; T50262; T50262.
DR RefSeq; NP_594824.1; NM_001020253.2.
DR AlphaFoldDB; Q9URX8; -.
DR SMR; Q9URX8; -.
DR BioGRID; 279920; 7.
DR STRING; 4896.SPAC890.06.1; -.
DR iPTMnet; Q9URX8; -.
DR SwissPalm; Q9URX8; -.
DR MaxQB; Q9URX8; -.
DR PaxDb; Q9URX8; -.
DR PRIDE; Q9URX8; -.
DR EnsemblFungi; SPAC890.06.1; SPAC890.06.1:pep; SPAC890.06.
DR GeneID; 2543502; -.
DR KEGG; spo:SPAC890.06; -.
DR PomBase; SPAC890.06; -.
DR VEuPathDB; FungiDB:SPAC890.06; -.
DR eggNOG; KOG1900; Eukaryota.
DR HOGENOM; CLU_000429_0_1_1; -.
DR InParanoid; Q9URX8; -.
DR OMA; EYYSRMI; -.
DR PhylomeDB; Q9URX8; -.
DR Reactome; R-SPO-159227; Transport of the SLBP independent Mature mRNA.
DR Reactome; R-SPO-159231; Transport of Mature mRNA Derived from an Intronless Transcript.
DR Reactome; R-SPO-159236; Transport of Mature mRNA derived from an Intron-Containing Transcript.
DR Reactome; R-SPO-3232142; SUMOylation of ubiquitinylation proteins.
DR Reactome; R-SPO-4085377; SUMOylation of SUMOylation proteins.
DR Reactome; R-SPO-4551638; SUMOylation of chromatin organization proteins.
DR Reactome; R-SPO-4570464; SUMOylation of RNA binding proteins.
DR Reactome; R-SPO-5578749; Transcriptional regulation by small RNAs.
DR Reactome; R-SPO-9615933; Postmitotic nuclear pore complex (NPC) reformation.
DR PRO; PR:Q9URX8; -.
DR Proteomes; UP000002485; Chromosome I.
DR GO; GO:0005737; C:cytoplasm; HDA:PomBase.
DR GO; GO:0005635; C:nuclear envelope; HDA:PomBase.
DR GO; GO:0005643; C:nuclear pore; IDA:PomBase.
DR GO; GO:0044611; C:nuclear pore inner ring; IBA:GO_Central.
DR GO; GO:0017056; F:structural constituent of nuclear pore; IBA:GO_Central.
DR GO; GO:0006606; P:protein import into nucleus; IBA:GO_Central.
DR GO; GO:0036228; P:protein localization to nuclear inner membrane; IBA:GO_Central.
DR GO; GO:0006405; P:RNA export from nucleus; IBA:GO_Central.
DR GO; GO:0006407; P:rRNA export from nucleus; ISO:PomBase.
DR GO; GO:0000972; P:transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery; IBA:GO_Central.
DR Gene3D; 1.20.120.1880; -; 1.
DR Gene3D; 1.25.40.440; -; 1.
DR Gene3D; 1.25.40.450; -; 1.
DR InterPro; IPR007187; Nucleoporin_Nup133/Nup155_C.
DR InterPro; IPR014908; Nucleoporin_Nup133/Nup155_N.
DR InterPro; IPR004870; Nucleoporin_Nup155.
DR InterPro; IPR042533; Nucleoporin_Nup155_C_1.
DR InterPro; IPR042537; Nucleoporin_Nup155_C_2.
DR InterPro; IPR042538; Nucleoporin_Nup155_C_3.
DR PANTHER; PTHR10350; PTHR10350; 1.
DR Pfam; PF03177; Nucleoporin_C; 1.
DR Pfam; PF08801; Nucleoporin_N; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Nucleus; Reference proteome; Transport.
FT CHAIN 1..1315
FT /note="Probable nucleoporin C890.06"
FT /id="PRO_0000204847"
SQ SEQUENCE 1315 AA; 147631 MW; 600745232D1EE2E6 CRC64;
MDINDPSFSS TENGIYELLS RGYAAIEAAT ERDLKLPELG DIIGQVHAPE YISQVLSGWK
PFYLRSVVNI PDRIFEQYNR TECFTQMGLF AEIQRAWITV DNRLFLWDYL SGQNFQAYED
LSHTIVNVKL VRPKANVFVS EIQHLLVIAT SQEMLLLGVT IDEKTGELSF FSTGIQISVQ
GINVNCIVSS EDGRIFFSGN KDPNLYEFSY QLEEGWFSRR CSKINITGSV FDNFIPSFFS
FGTHGDGIKQ IAVDDSRSLL YVLRETSSVS CYELTKNGVN RCVFYSFSSM ISQAQMLNAT
SPLLDPRTTQ IVSIVPIPAY ESQQIYCVAI TSTGCRFYMR GGRGPISHYA PSNSTLSSTP
PSTLQLTFVR FPPPMQVENY ASSRNYPANP FFLQNQSTSQ QQPERSSAVK TTPMKCSSLS
NIYTSDLFFA ISSSNTNEGD VVCCTAPEVG RIANAWQSGT QPSLIESSMY VPIKGFVQDI
KCIQNSRERN ELVSQFNTPP PTFAILTNTG VYVVVHRRPI DVLASAIRMG PSLSSGIDGQ
VQLFFESVGR AEGCATCLGI VSGCLDQGDF SHAAANFSGS TTKLAQADLL DIVKKYYIEF
GGKAFIDQSR YNNQYDSSSL EFVRLSGCHD GLASSISRII RNVWKNHVII AKKMQNKRIH
YAPAFNATEI LKIQSGLLYL STFLENNKSF IEGLNSPNTL IGSSNVADEI AVQAEHRALS
ALLLVLQQIV EGISFLLFLN DTGVSDFHEI VSSTSIDIQK SCSNMTFGEF FTSKRGREVT
KELVNSLVNR HLQSGGNIDM VSQLLRKKCG SFCSADDVLI FKAVESLKKA KDTVDIEERQ
SLIELSYTLF KKAAHVFTPE DLRLAVEEYK SLNAYTTAVN LALHVASARD DRNQALSYLV
DGMPENDPRR EPFESRTKCY SYIFEILDSL ESQMSNDSSA IKVDVYDTIQ RSKDELFHYC
FYDWYSFKGL TDRLIEIDSP YIQSYLERNS TKDMKIADLL WQYYAKREQY YQASIVLYDL
ATTHLAFSLE QRIEYLTRAK GFGSCHVPNS LRHKMNKVML SVLEQLDVAS IQDDVLIAIR
GDMRIPTSKR EELSKQLDGE IIPLSDLFNN YADPLGYGEI CLSIFQCADY RGINEILNCW
ESIIKTTHEN AIISPVGSSP VEAVSSTLKN LTLRFSQSEN VFPIEQIIDI TERYAFDQQG
EAVATGWVID TFLGAGVSHE LIFIVLNQLY DRREKPWQGK DRLFFLIKEV THLLKLWHEV
SVRAGVAQTS KPSFDAPLVL EAIEKYKNAL GAPDTATKSC KENLISLDSE IRQTY