NGR_MEDTR
ID NGR_MEDTR Reviewed; 262 AA.
AC A0A072TLV8;
DT 07-OCT-2020, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2014, sequence version 1.
DT 25-MAY-2022, entry version 33.
DE RecName: Full=Protein NEGATIVE GRAVITROPIC RESPONSE OF ROOTS {ECO:0000303|PubMed:27748769};
DE AltName: Full=MtNGR {ECO:0000303|PubMed:27748769};
GN Name=NGR {ECO:0000303|PubMed:27748769};
GN OrderedLocusNames=MTR_8g021237 {ECO:0000312|EMBL:KEH18489.1};
GN ORFNames=MtrunA17_Chr8g0344431 {ECO:0000312|EMBL:RHN39496.1};
OS Medicago truncatula (Barrel medic) (Medicago tribuloides).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago.
OX NCBI_TaxID=3880;
RN [1]
RP FUNCTION, AND DISRUPTION PHENOTYPE.
RX PubMed=27748769; DOI=10.1038/nplants.2016.155;
RA Ge L., Chen R.;
RT "Negative gravitropism in plant roots.";
RL Nat. Plants 2:16155-16155(2016).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Jemalong A17;
RX PubMed=22089132; DOI=10.1038/nature10625;
RA Young N.D., Debelle F., Oldroyd G.E.D., Geurts R., Cannon S.B.,
RA Udvardi M.K., Benedito V.A., Mayer K.F.X., Gouzy J., Schoof H.,
RA Van de Peer Y., Proost S., Cook D.R., Meyers B.C., Spannagl M., Cheung F.,
RA De Mita S., Krishnakumar V., Gundlach H., Zhou S., Mudge J., Bharti A.K.,
RA Murray J.D., Naoumkina M.A., Rosen B., Silverstein K.A.T., Tang H.,
RA Rombauts S., Zhao P.X., Zhou P., Barbe V., Bardou P., Bechner M.,
RA Bellec A., Berger A., Berges H., Bidwell S., Bisseling T., Choisne N.,
RA Couloux A., Denny R., Deshpande S., Dai X., Doyle J.J., Dudez A.-M.,
RA Farmer A.D., Fouteau S., Franken C., Gibelin C., Gish J., Goldstein S.,
RA Gonzalez A.J., Green P.J., Hallab A., Hartog M., Hua A., Humphray S.J.,
RA Jeong D.-H., Jing Y., Jocker A., Kenton S.M., Kim D.-J., Klee K., Lai H.,
RA Lang C., Lin S., Macmil S.L., Magdelenat G., Matthews L., McCorrison J.,
RA Monaghan E.L., Mun J.-H., Najar F.Z., Nicholson C., Noirot C.,
RA O'Bleness M., Paule C.R., Poulain J., Prion F., Qin B., Qu C., Retzel E.F.,
RA Riddle C., Sallet E., Samain S., Samson N., Sanders I., Saurat O.,
RA Scarpelli C., Schiex T., Segurens B., Severin A.J., Sherrier D.J., Shi R.,
RA Sims S., Singer S.R., Sinharoy S., Sterck L., Viollet A., Wang B.-B.,
RA Wang K., Wang M., Wang X., Warfsmann J., Weissenbach J., White D.D.,
RA White J.D., Wiley G.B., Wincker P., Xing Y., Yang L., Yao Z., Ying F.,
RA Zhai J., Zhou L., Zuber A., Denarie J., Dixon R.A., May G.D.,
RA Schwartz D.C., Rogers J., Quetier F., Town C.D., Roe B.A.;
RT "The Medicago genome provides insight into the evolution of rhizobial
RT symbioses.";
RL Nature 480:520-524(2011).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Jemalong A17;
RX PubMed=24767513; DOI=10.1186/1471-2164-15-312;
RA Tang H., Krishnakumar V., Bidwell S., Rosen B., Chan A., Zhou S.,
RA Gentzbittel L., Childs K.L., Yandell M., Gundlach H., Mayer K.F.,
RA Schwartz D.C., Town C.D.;
RT "An improved genome release (version Mt4.0) for the model legume Medicago
RT truncatula.";
RL BMC Genomics 15:312-312(2014).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Jemalong A17;
RX PubMed=30397259; DOI=10.1038/s41477-018-0286-7;
RA Pecrix Y., Staton S.E., Sallet E., Lelandais-Briere C., Moreau S.,
RA Carrere S., Blein T., Jardinaud M.F., Latrasse D., Zouine M., Zahm M.,
RA Kreplak J., Mayjonade B., Satge C., Perez M., Cauet S., Marande W.,
RA Chantry-Darmon C., Lopez-Roques C., Bouchez O., Berard A., Debelle F.,
RA Munos S., Bendahmane A., Berges H., Niebel A., Buitink J., Frugier F.,
RA Benhamed M., Crespi M., Gouzy J., Gamas P.;
RT "Whole-genome landscape of Medicago truncatula symbiotic genes.";
RL Nat. Plants 4:1017-1025(2018).
CC -!- FUNCTION: Involved in the control of root gravitropism.
CC {ECO:0000269|PubMed:27748769}.
CC -!- DISRUPTION PHENOTYPE: Roots exhibit a negative gravitropic response,
CC and grow upward in the opposite direrction of root gravitropism.
CC {ECO:0000269|PubMed:27748769}.
CC -!- SIMILARITY: Belongs to the LAZY family. {ECO:0000305}.
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DR EMBL; KT021795; ANJ86422.1; -; mRNA.
DR EMBL; CM001224; KEH18489.1; -; Genomic_DNA.
DR EMBL; PSQE01000008; RHN39496.1; -; Genomic_DNA.
DR RefSeq; XP_013444464.1; XM_013589010.1.
DR AlphaFoldDB; A0A072TLV8; -.
DR SMR; A0A072TLV8; -.
DR EnsemblPlants; KEH18489; KEH18489; MTR_8g021237.
DR GeneID; 25500557; -.
DR Gramene; KEH18489; KEH18489; MTR_8g021237.
DR KEGG; mtr:MTR_8g021237; -.
DR HOGENOM; CLU_068790_0_0_1; -.
DR OrthoDB; 1227635at2759; -.
DR Proteomes; UP000002051; Chromosome 8.
DR Proteomes; UP000265566; Chromosome 8.
DR GO; GO:0009958; P:positive gravitropism; IMP:UniProtKB.
DR GO; GO:0040008; P:regulation of growth; IEA:UniProtKB-KW.
DR InterPro; IPR044683; LAZY.
DR PANTHER; PTHR34045; PTHR34045; 1.
PE 2: Evidence at transcript level;
KW Growth regulation; Reference proteome.
FT CHAIN 1..262
FT /note="Protein NEGATIVE GRAVITROPIC RESPONSE OF ROOTS"
FT /id="PRO_0000451021"
FT REGION 1..40
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 43..49
FT /note="IGT motif"
FT /evidence="ECO:0000305"
FT COMPBIAS 10..31
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 262 AA; 30167 MW; 53FC64BFF999E35E CRC64;
MKFFNWMQNK LGGKQENRKS NTSTSTTYAK PEPREEFSDW PHSLLAIGTF GNNNEITQNI
ENQNTQQEDP SSSEEVPDFT PEEIGKLQKE LTRLLRRKPN VEKEISELPL DRFLNCPSSL
EVDRRISNAL CSESGGDKDE DIEKTLSVIL DKCKDICAEK SKKSIGKKSI SFLLKKMFVC
RSGFAPTPSL RDTLQESRME KLLRTMLHKK LYTQNNSRAP VLKKCLENKK SIKKRNEDEA
EERIDEGSKW VKTDSEYIVL EI
