NH115_CAEEL
ID NH115_CAEEL Reviewed; 391 AA.
AC O16662; Q86PI5;
DT 15-MAR-2004, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2004, sequence version 3.
DT 03-AUG-2022, entry version 150.
DE RecName: Full=Nuclear hormone receptor family member nhr-115;
GN Name=nhr-115; ORFNames=T27B7.4;
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RX PubMed=15983867; DOI=10.1007/s00239-004-0175-8;
RA Robinson-Rechavi M., Maina C.V., Gissendanner C.R., Laudet V., Sluder A.;
RT "Explosive lineage-specific expansion of the orphan nuclear receptor HNF4
RT in nematodes.";
RL J. Mol. Evol. 60:577-586(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
CC -!- FUNCTION: Orphan nuclear receptor.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00407}.
CC -!- SIMILARITY: Belongs to the nuclear hormone receptor family.
CC {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AY204203; AAO39204.1; -; mRNA.
DR EMBL; FO081753; CCD74245.1; -; Genomic_DNA.
DR RefSeq; NP_001256014.1; NM_001269085.1.
DR AlphaFoldDB; O16662; -.
DR STRING; 6239.T27B7.4a; -.
DR PaxDb; O16662; -.
DR EnsemblMetazoa; T27B7.4a.1; T27B7.4a.1; WBGene00003705.
DR GeneID; 178708; -.
DR KEGG; cel:CELE_T27B7.4; -.
DR UCSC; T27B7.4.1; c. elegans.
DR CTD; 178708; -.
DR WormBase; T27B7.4a; CE35785; WBGene00003705; nhr-115.
DR eggNOG; KOG3575; Eukaryota.
DR GeneTree; ENSGT00970000195869; -.
DR HOGENOM; CLU_007368_7_1_1; -.
DR InParanoid; O16662; -.
DR OMA; FMDIIEY; -.
DR OrthoDB; 1689175at2759; -.
DR PhylomeDB; O16662; -.
DR PRO; PR:O16662; -.
DR Proteomes; UP000001940; Chromosome V.
DR Bgee; WBGene00003705; Expressed in adult organism and 2 other tissues.
DR ExpressionAtlas; O16662; baseline and differential.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0045087; P:innate immune response; HEP:WormBase.
DR Gene3D; 1.10.565.10; -; 1.
DR Gene3D; 3.30.50.10; -; 1.
DR InterPro; IPR035500; NHR-like_dom_sf.
DR InterPro; IPR000536; Nucl_hrmn_rcpt_lig-bd.
DR InterPro; IPR001628; Znf_hrmn_rcpt.
DR InterPro; IPR013088; Znf_NHR/GATA.
DR Pfam; PF00104; Hormone_recep; 1.
DR Pfam; PF00105; zf-C4; 1.
DR PRINTS; PR00047; STROIDFINGER.
DR SMART; SM00430; HOLI; 1.
DR SMART; SM00399; ZnF_C4; 1.
DR SUPFAM; SSF48508; SSF48508; 1.
DR PROSITE; PS51843; NR_LBD; 1.
DR PROSITE; PS00031; NUCLEAR_REC_DBD_1; 1.
DR PROSITE; PS51030; NUCLEAR_REC_DBD_2; 1.
PE 2: Evidence at transcript level;
KW DNA-binding; Metal-binding; Nucleus; Receptor; Reference proteome;
KW Transcription; Transcription regulation; Zinc; Zinc-finger.
FT CHAIN 1..391
FT /note="Nuclear hormone receptor family member nhr-115"
FT /id="PRO_0000053803"
FT DOMAIN 130..388
FT /note="NR LBD"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01189"
FT DNA_BIND 5..77
FT /note="Nuclear receptor"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00407"
FT ZN_FING 8..28
FT /note="NR C4-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00407"
FT ZN_FING 41..65
FT /note="NR C4-type; atypical"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00407"
SQ SEQUENCE 391 AA; 46289 MW; EA49D350BCBCA3D8 CRC64;
MKKVLFPCQI CGQNSHGTHF GIVSCRACAA FFRRSVNSKW ARKGCLTNFK DKGSCFCKPC
RLRKCVEIGM DASKFQYDRD AISAIKHPKI FPSVSYYVGR PEFLMFSDSN VTSQKTFIDV
QNLVFEVSRY LDHGCETPIY AENQLKKLTL GFKLMQFDYQ NVKFFDKIGK AEFIDIIEYY
FLTVAKWIAH FDEFRKLDQS LQIKLLQAIW HVWSKIHKCA STAFYRKSNP NAKPTQKILR
NVCMDRMHVH KLDTSWMSDY PTEHVTRFML THHVYDFKIV ESLLKLDPTD VELTFMFAQL
CFEYAGKRFQ GEILKITDHF QQVLSNDLHH YYITDQRRER YFQRLTDLMK VNNLIQRSIW
ETRPHRELGR VFEISKLEFS HPEMFDDSGF C