NH121_CAEEL
ID NH121_CAEEL Reviewed; 461 AA.
AC Q9TZ99;
DT 21-FEB-2006, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2002, sequence version 2.
DT 03-AUG-2022, entry version 137.
DE RecName: Full=Nuclear hormone receptor family member nhr-121;
GN Name=nhr-121; ORFNames=E02H9.8;
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RX PubMed=15983867; DOI=10.1007/s00239-004-0175-8;
RA Robinson-Rechavi M., Maina C.V., Gissendanner C.R., Laudet V., Sluder A.;
RT "Explosive lineage-specific expansion of the orphan nuclear receptor HNF4
RT in nematodes.";
RL J. Mol. Evol. 60:577-586(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
CC -!- FUNCTION: Orphan nuclear receptor.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00407}.
CC -!- SIMILARITY: Belongs to the nuclear hormone receptor family.
CC {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AY305847; AAR11991.1; -; mRNA.
DR EMBL; FO081030; CCD68638.1; -; Genomic_DNA.
DR PIR; T33599; T33599.
DR RefSeq; NP_497559.2; NM_065158.5.
DR AlphaFoldDB; Q9TZ99; -.
DR SMR; Q9TZ99; -.
DR BioGRID; 48806; 1.
DR IntAct; Q9TZ99; 2.
DR STRING; 6239.E02H9.8b.1; -.
DR PaxDb; Q9TZ99; -.
DR EnsemblMetazoa; E02H9.8a.1; E02H9.8a.1; WBGene00003711.
DR GeneID; 184003; -.
DR KEGG; cel:CELE_E02H9.8; -.
DR UCSC; E02H9.8b.1; c. elegans.
DR CTD; 184003; -.
DR WormBase; E02H9.8a; CE30644; WBGene00003711; nhr-121.
DR eggNOG; KOG3575; Eukaryota.
DR HOGENOM; CLU_007368_17_1_1; -.
DR InParanoid; Q9TZ99; -.
DR PRO; PR:Q9TZ99; -.
DR Proteomes; UP000001940; Chromosome III.
DR Bgee; WBGene00003711; Expressed in larva and 2 other tissues.
DR ExpressionAtlas; Q9TZ99; differential.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IBA:GO_Central.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:1990239; F:steroid hormone binding; IDA:WormBase.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR Gene3D; 1.10.565.10; -; 1.
DR Gene3D; 3.30.50.10; -; 1.
DR InterPro; IPR035500; NHR-like_dom_sf.
DR InterPro; IPR000536; Nucl_hrmn_rcpt_lig-bd.
DR InterPro; IPR001628; Znf_hrmn_rcpt.
DR InterPro; IPR013088; Znf_NHR/GATA.
DR Pfam; PF00104; Hormone_recep; 1.
DR Pfam; PF00105; zf-C4; 1.
DR PRINTS; PR00047; STROIDFINGER.
DR SMART; SM00430; HOLI; 1.
DR SMART; SM00399; ZnF_C4; 1.
DR SUPFAM; SSF48508; SSF48508; 1.
DR PROSITE; PS51843; NR_LBD; 1.
DR PROSITE; PS00031; NUCLEAR_REC_DBD_1; 1.
DR PROSITE; PS51030; NUCLEAR_REC_DBD_2; 1.
PE 2: Evidence at transcript level;
KW DNA-binding; Metal-binding; Nucleus; Receptor; Reference proteome;
KW Transcription; Transcription regulation; Zinc; Zinc-finger.
FT CHAIN 1..461
FT /note="Nuclear hormone receptor family member nhr-121"
FT /id="PRO_0000223590"
FT DOMAIN 185..455
FT /note="NR LBD"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01189"
FT DNA_BIND 19..94
FT /note="Nuclear receptor"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00407"
FT ZN_FING 22..42
FT /note="NR C4-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00407"
FT ZN_FING 58..77
FT /note="NR C4-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00407"
SQ SEQUENCE 461 AA; 52952 MW; FC5059F1BBFF2B44 CRC64;
MYYGHEPHDW GTSSSTSDMK ECTICEAPSN GYHFNAASCS ACAAFFRRTV TLNRNFVCTH
QNTCRVNYAM RVICRACRYH KCINMGMERS AVQPRRDCNA GRRKIMYNST NSLKTQEHTF
APPTPTVPQT TTVIVTKDER IYEDSSPEIH YAQSYSSSIS EEISSLSPKI SVSMCSGTDI
TLNFEAEQVL EDLLREERLF NERRKLLYCS NSCISELLTN ENANEIPYSQ SNLQPLTFAG
IQKHIRPQIL VIYEWLRGWR HFELLNIKDK SVFLRRCVLY HTILDPSYLS YRLGLPEKFV
MFNGMYVGVQ DGDKTGWEDE KDCITADLKI KLYRPLMDRL INEVCVSMKV INLTFVEFVL
LKALVCFKSS TTCEVSVPLK KFMNTYMDTI LRALNVHYQT LGMTKEDIAQ RIGNVILMMS
SIFAVGMECL ESHQKIQFFD LWQLDDLLIK LIQRGGGGAN Y