NH2L1_CAEEL
ID NH2L1_CAEEL Reviewed; 128 AA.
AC Q21568;
DT 01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1997, sequence version 1.
DT 03-AUG-2022, entry version 124.
DE RecName: Full=NHP2-like protein 1 homolog;
GN ORFNames=M28.5;
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
CC -!- FUNCTION: Binds to the 5'-stem-loop of U4 snRNA and may play a role in
CC the late stage of spliceosome assembly. The protein undergoes a
CC conformational change upon RNA-binding (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eL8 family.
CC {ECO:0000305}.
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DR EMBL; Z49911; CAA90127.1; -; Genomic_DNA.
DR PIR; T23808; T23808.
DR RefSeq; NP_496300.1; NM_063899.5.
DR AlphaFoldDB; Q21568; -.
DR SMR; Q21568; -.
DR BioGRID; 39959; 13.
DR STRING; 6239.M28.5.2; -.
DR EPD; Q21568; -.
DR PaxDb; Q21568; -.
DR PeptideAtlas; Q21568; -.
DR EnsemblMetazoa; M28.5.1; M28.5.1; WBGene00010896.
DR UCSC; M28.5.1; c. elegans.
DR WormBase; M28.5; CE02283; WBGene00010896; -.
DR eggNOG; KOG3387; Eukaryota.
DR GeneTree; ENSGT00550000074840; -.
DR HOGENOM; CLU_084513_4_1_1; -.
DR InParanoid; Q21568; -.
DR OMA; MQSSPQC; -.
DR OrthoDB; 1497609at2759; -.
DR PhylomeDB; Q21568; -.
DR Reactome; R-CEL-6791226; Major pathway of rRNA processing in the nucleolus and cytosol.
DR Reactome; R-CEL-72163; mRNA Splicing - Major Pathway.
DR Reactome; R-CEL-72165; mRNA Splicing - Minor Pathway.
DR PRO; PR:Q21568; -.
DR Proteomes; UP000001940; Chromosome II.
DR Bgee; WBGene00010896; Expressed in embryo and 4 other tissues.
DR GO; GO:0031428; C:box C/D RNP complex; IBA:GO_Central.
DR GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR GO; GO:0071011; C:precatalytic spliceosome; IBA:GO_Central.
DR GO; GO:0032040; C:small-subunit processome; IBA:GO_Central.
DR GO; GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0000470; P:maturation of LSU-rRNA; IBA:GO_Central.
DR GO; GO:0030490; P:maturation of SSU-rRNA; IBA:GO_Central.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IBA:GO_Central.
DR Gene3D; 3.30.1330.30; -; 1.
DR InterPro; IPR002415; H/ACA_rnp_Nhp2-like.
DR InterPro; IPR029064; L30e-like.
DR InterPro; IPR004038; Ribosomal_L7Ae/L30e/S12e/Gad45.
DR InterPro; IPR018492; Ribosomal_L7Ae/L8/Nhp2.
DR InterPro; IPR004037; Ribosomal_L7Ae_CS.
DR Pfam; PF01248; Ribosomal_L7Ae; 1.
DR PRINTS; PR00881; L7ARS6FAMILY.
DR PRINTS; PR00883; NUCLEARHMG.
DR SUPFAM; SSF55315; SSF55315; 1.
DR PROSITE; PS01082; RIBOSOMAL_L7AE; 1.
PE 3: Inferred from homology;
KW mRNA processing; mRNA splicing; Nucleus; Reference proteome;
KW Ribonucleoprotein; RNA-binding; Spliceosome.
FT CHAIN 1..128
FT /note="NHP2-like protein 1 homolog"
FT /id="PRO_0000136781"
SQ SEQUENCE 128 AA; 14001 MW; 445C4BF3504E45F0 CRC64;
MADDGVNPKA FPLADTNLSQ KLMDLVQQAM NYKQLKKGAN EATKTLNRGI SEIIVMAADA
EPLEILLHLP LLCEDKNVPY VFVRSKAALG RACGVTRPVI AASITQNEGS QLKSQIQKIK
EDVEKLLI