NHR12_CAEEL
ID NHR12_CAEEL Reviewed; 453 AA.
AC Q21701;
DT 30-MAY-2000, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1996, sequence version 1.
DT 03-AUG-2022, entry version 158.
DE RecName: Full=Nuclear hormone receptor family member nhr-12;
GN Name=nhr-12; ORFNames=R04B5.4;
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
CC -!- FUNCTION: Orphan nuclear receptor.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00407}.
CC -!- SIMILARITY: Belongs to the nuclear hormone receptor family.
CC {ECO:0000305}.
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DR EMBL; Z70782; CAA94840.1; -; Genomic_DNA.
DR PIR; T23888; T23888.
DR RefSeq; NP_505589.1; NM_073188.4.
DR AlphaFoldDB; Q21701; -.
DR SMR; Q21701; -.
DR BioGRID; 44434; 6.
DR DIP; DIP-26561N; -.
DR IntAct; Q21701; 6.
DR STRING; 6239.R04B5.4b; -.
DR EPD; Q21701; -.
DR PaxDb; Q21701; -.
DR EnsemblMetazoa; R04B5.4a.1; R04B5.4a.1; WBGene00003611.
DR GeneID; 179403; -.
DR UCSC; R04B5.4b; c. elegans.
DR CTD; 179403; -.
DR WormBase; R04B5.4a; CE06214; WBGene00003611; nhr-12.
DR eggNOG; KOG3575; Eukaryota.
DR GeneTree; ENSGT00970000196284; -.
DR InParanoid; Q21701; -.
DR SignaLink; Q21701; -.
DR PRO; PR:Q21701; -.
DR Proteomes; UP000001940; Chromosome V.
DR Bgee; WBGene00003611; Expressed in germ line (C elegans) and 4 other tissues.
DR ExpressionAtlas; Q21701; baseline and differential.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IBA:GO_Central.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR Gene3D; 1.10.565.10; -; 1.
DR Gene3D; 3.30.50.10; -; 1.
DR InterPro; IPR035500; NHR-like_dom_sf.
DR InterPro; IPR000536; Nucl_hrmn_rcpt_lig-bd.
DR InterPro; IPR001628; Znf_hrmn_rcpt.
DR InterPro; IPR013088; Znf_NHR/GATA.
DR Pfam; PF00104; Hormone_recep; 1.
DR Pfam; PF00105; zf-C4; 1.
DR PRINTS; PR00047; STROIDFINGER.
DR SMART; SM00430; HOLI; 1.
DR SMART; SM00399; ZnF_C4; 1.
DR SUPFAM; SSF48508; SSF48508; 1.
DR PROSITE; PS51843; NR_LBD; 1.
DR PROSITE; PS00031; NUCLEAR_REC_DBD_1; 1.
DR PROSITE; PS51030; NUCLEAR_REC_DBD_2; 1.
PE 3: Inferred from homology;
KW DNA-binding; Metal-binding; Nucleus; Receptor; Reference proteome;
KW Transcription; Transcription regulation; Zinc; Zinc-finger.
FT CHAIN 1..453
FT /note="Nuclear hormone receptor family member nhr-12"
FT /id="PRO_0000053765"
FT DOMAIN 178..451
FT /note="NR LBD"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01189"
FT DNA_BIND 44..119
FT /note="Nuclear receptor"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00407"
FT ZN_FING 47..67
FT /note="NR C4-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00407"
FT ZN_FING 83..107
FT /note="NR C4-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00407"
FT REGION 1..37
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 453 AA; 52032 MW; D81C3FC696BBA10E CRC64;
MEQIPQEQKT EPFLASFTTT EKLGTETPTT SITPNTQFRG RYEKPNCAVC NEVGDGLHFG
AEACRACTAF FRRSVALSKK YECRAGRNCE VSSNIRCMCR SCRYDKCIEV GMNPECVQNR
RENDTPKADL QFDTSKTEIR RPIPNFNIVP QASAVPSTSN FMDFSIFKDT PISNFSAFSP
ASLPGLSSSP SLETMPLLER MRINYDKMEN ARNVIHRREG ENIFQQKVPR AITFREATEV
TTKEVSLVAD WIEWCFDDFG LLPVDQKTIL FQNFFVFFCM LERAFMTVKS GRDGIVVMAS
KDYIDYDNLE GFFKECNSGT GGTPAEIAKL IRPSFELQKR SLINLMRLEN VDSYEFFALC
VMLFWDFGLE GQSDECNEVG RRVKHRVTRE MTFYLRNVKK HEEPLYRMAS VVSILPSLQR
AVRRFQEDIE MANIFNIYAL PENFVNIING KFN