NHR18_CAEEL
ID NHR18_CAEEL Reviewed; 394 AA.
AC O16360; Q9XYC0;
DT 30-APR-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2002, sequence version 3.
DT 03-AUG-2022, entry version 144.
DE RecName: Full=Nuclear hormone receptor family member nhr-18;
GN Name=nhr-18; ORFNames=F44C8.3;
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
RN [2]
RP NUCLEOTIDE SEQUENCE [MRNA] OF 3-394.
RC STRAIN=Bristol N2;
RX PubMed=10022975;
RA Sluder A.E., Mathews S.W., Hough D., Yin V.P., Maina C.V.;
RT "The nuclear receptor superfamily has undergone extensive proliferation and
RT diversification in nematodes.";
RL Genome Res. 9:103-120(1999).
CC -!- FUNCTION: Orphan nuclear receptor.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00407}.
CC -!- SIMILARITY: Belongs to the nuclear hormone receptor family.
CC {ECO:0000305}.
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DR EMBL; FO081357; CCD71003.1; -; Genomic_DNA.
DR EMBL; AF083232; AAD03690.1; -; mRNA.
DR PIR; T43356; T43356.
DR RefSeq; NP_503608.2; NM_071207.5.
DR AlphaFoldDB; O16360; -.
DR SMR; O16360; -.
DR BioGRID; 43763; 1.
DR STRING; 6239.F44C8.3; -.
DR PaxDb; O16360; -.
DR EnsemblMetazoa; F44C8.3.1; F44C8.3.1; WBGene00003617.
DR GeneID; 178702; -.
DR KEGG; cel:CELE_F44C8.3; -.
DR UCSC; F44C8.3; c. elegans.
DR CTD; 178702; -.
DR WormBase; F44C8.3; CE30796; WBGene00003617; nhr-18.
DR eggNOG; KOG3575; Eukaryota.
DR GeneTree; ENSGT00970000195928; -.
DR HOGENOM; CLU_007368_7_1_1; -.
DR InParanoid; O16360; -.
DR OrthoDB; 1136195at2759; -.
DR PhylomeDB; O16360; -.
DR PRO; PR:O16360; -.
DR Proteomes; UP000001940; Chromosome V.
DR Bgee; WBGene00003617; Expressed in pharyngeal muscle cell (C elegans) and 3 other tissues.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 1.10.565.10; -; 1.
DR Gene3D; 3.30.50.10; -; 1.
DR InterPro; IPR035500; NHR-like_dom_sf.
DR InterPro; IPR000536; Nucl_hrmn_rcpt_lig-bd.
DR InterPro; IPR001628; Znf_hrmn_rcpt.
DR InterPro; IPR013088; Znf_NHR/GATA.
DR Pfam; PF00104; Hormone_recep; 1.
DR Pfam; PF00105; zf-C4; 1.
DR PRINTS; PR00047; STROIDFINGER.
DR SMART; SM00430; HOLI; 1.
DR SMART; SM00399; ZnF_C4; 1.
DR SUPFAM; SSF48508; SSF48508; 1.
DR PROSITE; PS51843; NR_LBD; 1.
DR PROSITE; PS00031; NUCLEAR_REC_DBD_1; 1.
DR PROSITE; PS51030; NUCLEAR_REC_DBD_2; 1.
PE 2: Evidence at transcript level;
KW DNA-binding; Metal-binding; Nucleus; Receptor; Reference proteome;
KW Transcription; Transcription regulation; Zinc; Zinc-finger.
FT CHAIN 1..394
FT /note="Nuclear hormone receptor family member nhr-18"
FT /id="PRO_0000053769"
FT DOMAIN 134..394
FT /note="NR LBD"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01189"
FT DNA_BIND 8..83
FT /note="Nuclear receptor"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00407"
FT ZN_FING 11..31
FT /note="NR C4-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00407"
FT ZN_FING 48..71
FT /note="NR C4-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00407"
SQ SEQUENCE 394 AA; 45304 MW; D3BA5E29CEB85EA0 CRC64;
MPAPLFLSGS CEVCGDKTSG RHFGVMSCRA CAAFFRRAAT WNLEKRICPN GTCHTSVNGK
FNCKQCRLKK CLDVGMDTRR FQTDRDLISC SAISQSLATF LGRPEFILCC EPDRASVLKT
TIDVTRLVNI ARDMLQKPTN HVLPSNSLEQ LATTLDNMRC VESNKEVKFI EKYGKVETLK
SWEQGFLRVV EWFSNFSEFR ELNERLKLEI VKSCWFSWTR LDKLSETANK QINKMLGKSQ
LMVGNGACMN MNNFEIDLSW CTNYSLEQLK YFFQTPNGKK NFQQSIQDMI DLNPSSIEVS
YMLLHLSLEH AGKRLHGDAL DATENLVQVQ ANNLHKYYVE KLKLANYSSR LTQLMRITRT
LEADIRIRIE KKQIADVFNI MKIDFSHPEM FEAT