NID1_RAT
ID NID1_RAT Reviewed; 324 AA.
AC P08460; Q712L9;
DT 01-AUG-1988, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-1992, sequence version 2.
DT 25-MAY-2022, entry version 135.
DE RecName: Full=Nidogen-1;
DE Short=NID-1;
DE AltName: Full=Entactin;
DE Flags: Fragment;
GN Name=Nid1; Synonyms=Nid;
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RX PubMed=3264556; DOI=10.1083/jcb.107.6.2749;
RA Durkin M.E., Chakravarti S., Bartos B.B., Liu S.H., Friedman R.L.,
RA Chung A.E.;
RT "Amino acid sequence and domain structure of entactin. Homology with
RT epidermal growth factor precursor and low density lipoprotein receptor.";
RL J. Cell Biol. 107:2749-2756(1988).
RN [2]
RP PRELIMINARY NUCLEOTIDE SEQUENCE [MRNA].
RX PubMed=3470744; DOI=10.1073/pnas.84.6.1570;
RA Durkin M.E., Carlin B.E., Vergnes J., Bartos B.B., Merlie J., Chung A.E.;
RT "Carboxyl-terminal sequence of entactin deduced from a cDNA clone.";
RL Proc. Natl. Acad. Sci. U.S.A. 84:1570-1574(1987).
RN [3]
RP NUCLEOTIDE SEQUENCE [MRNA] OF 211-319.
RC STRAIN=Wistar;
RX PubMed=10727019; DOI=10.1078/s0171-9335(04)70013-8;
RA Konrad L., Albrecht M., Renneberg H., Ulrix W., Hoeben E., Verhoeven G.,
RA Aumuller G.;
RT "Mesenchymal entactin-1 (nidogen-1) is required for adhesion of peritubular
RT cells of the rat testis in vitro.";
RL Eur. J. Cell Biol. 79:112-120(2000).
CC -!- FUNCTION: Sulfated glycoprotein widely distributed in basement
CC membranes and tightly associated with laminin. Also binds to collagen
CC IV and perlecan. It probably has a role in cell-extracellular matrix
CC interactions.
CC -!- SUBUNIT: Interacts with FBLN1 and LGALS3BP. Interacts with PLXDC1 (By
CC similarity). {ECO:0000250}.
CC -!- INTERACTION:
CC P08460; Q91ZV7: Plxdc1; Xeno; NbExp=2; IntAct=EBI-8280787, EBI-8280807;
CC -!- SUBCELLULAR LOCATION: Secreted, extracellular space, extracellular
CC matrix, basement membrane.
CC -!- PTM: N- and O-glycosylated.
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DR EMBL; M15797; AAA41120.1; ALT_SEQ; mRNA.
DR EMBL; AJ224450; CAA11963.1; -; mRNA.
DR PIR; S14828; S14828.
DR AlphaFoldDB; P08460; -.
DR SMR; P08460; -.
DR IntAct; P08460; 2.
DR MINT; P08460; -.
DR STRING; 10116.ENSRNOP00000003349; -.
DR GlyGen; P08460; 1 site.
DR PaxDb; P08460; -.
DR PeptideAtlas; P08460; -.
DR PRIDE; P08460; -.
DR UCSC; RGD:3178; rat.
DR RGD; 3178; Nid1.
DR eggNOG; KOG1214; Eukaryota.
DR InParanoid; P08460; -.
DR PhylomeDB; P08460; -.
DR Proteomes; UP000002494; Unplaced.
DR GO; GO:0005604; C:basement membrane; ISO:RGD.
DR GO; GO:0071944; C:cell periphery; ISO:RGD.
DR GO; GO:0031012; C:extracellular matrix; ISO:RGD.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IBA:GO_Central.
DR GO; GO:0005518; F:collagen binding; ISO:RGD.
DR GO; GO:0050840; F:extracellular matrix binding; ISO:RGD.
DR GO; GO:0043236; F:laminin binding; ISO:RGD.
DR GO; GO:0043237; F:laminin-1 binding; ISO:RGD.
DR GO; GO:0043394; F:proteoglycan binding; ISO:RGD.
DR GO; GO:0007160; P:cell-matrix adhesion; ISO:RGD.
DR GO; GO:0030198; P:extracellular matrix organization; ISO:RGD.
DR GO; GO:0032836; P:glomerular basement membrane development; ISO:RGD.
DR GO; GO:0010811; P:positive regulation of cell-substrate adhesion; ISO:RGD.
DR InterPro; IPR003886; NIDO_dom.
DR Pfam; PF06119; NIDO; 1.
DR SMART; SM00539; NIDO; 1.
DR PROSITE; PS00010; ASX_HYDROXYL; 1.
DR PROSITE; PS51220; NIDO; 1.
PE 1: Evidence at protein level;
KW Basement membrane; Cell adhesion; Disulfide bond; EGF-like domain;
KW Extracellular matrix; Glycoprotein; Reference proteome; Secreted;
KW Sulfation.
FT CHAIN <1..>324
FT /note="Nidogen-1"
FT /id="PRO_0000055634"
FT DOMAIN 16..178
FT /note="NIDO"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00570"
FT DOMAIN 295..>324
FT /note="EGF-like"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00076"
FT REGION 219..259
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 200
FT /note="Sulfotyrosine"
FT /evidence="ECO:0000255"
FT MOD_RES 205
FT /note="Sulfotyrosine"
FT /evidence="ECO:0000255"
FT CARBOHYD 97
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT DISULFID 299..312
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00076"
FT DISULFID 306..321
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00076"
FT NON_TER 1
FT NON_TER 324
SQ SEQUENCE 324 AA; 35661 MW; CBDEAD3337019027 CRC64;
EFHPGTFPPS FGSVAPFLAD LDTTDGLGNV YYREDLSPFI IQMAAEYVQR GFPEVSFQPT
SVVVVTWESM APYGGPSGSL VEEGKRNTFQ AVLASSNSSS YAIFLYPDDG LQFFTTFSKK
DENQVPAVVG FSKGLEGFLW KSNGAYNIFA NDRESIENLA KSSNAGHQGV WVFEIGSPAT
AKGVVPADVN LDVDDDGADY EDEDYDLQTS HLGLEDVATQ PFPSHSPRRG YPDPHNVPRT
LAPSYEATER PHGIPTERTK SFQLPVERFP QKHPQVIDVD EVEETGVVFS YNTGSQQTCA
NNRHQCSVHA ECRDYATGFC CRCV