NIFK_FRAAL
ID NIFK_FRAAL Reviewed; 528 AA.
AC Q57118;
DT 01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1996, sequence version 1.
DT 03-AUG-2022, entry version 79.
DE RecName: Full=Nitrogenase molybdenum-iron protein beta chain;
DE EC=1.18.6.1;
DE AltName: Full=Dinitrogenase;
DE AltName: Full=Nitrogenase component I;
GN Name=nifK;
OS Frankia alni.
OC Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.
OX NCBI_TaxID=1859;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=ARI3;
RX PubMed=8574444; DOI=10.1111/j.1365-294x.1995.tb00242.x;
RA Nalin R., Domenach A.M., Normand P.;
RT "Molecular structure of the Frankia spp. nifD-K intergenic spacer and
RT design of Frankia genus compatible primer.";
RL Mol. Ecol. 4:483-491(1995).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=ARI3;
RA Specq A., Normand P.;
RL Submitted (APR-1996) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: This molybdenum-iron protein is part of the nitrogenase
CC complex that catalyzes the key enzymatic reactions in nitrogen
CC fixation.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=16 ATP + 16 H2O + N2 + 8 reduced [2Fe-2S]-[ferredoxin] = 16
CC ADP + 6 H(+) + H2 + 2 NH4(+) + 8 oxidized [2Fe-2S]-[ferredoxin] + 16
CC phosphate; Xref=Rhea:RHEA:21448, Rhea:RHEA-COMP:10000, Rhea:RHEA-
CC COMP:10001, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:17997,
CC ChEBI:CHEBI:18276, ChEBI:CHEBI:28938, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:33737, ChEBI:CHEBI:33738, ChEBI:CHEBI:43474,
CC ChEBI:CHEBI:456216; EC=1.18.6.1;
CC -!- COFACTOR:
CC Name=[8Fe-7S] cluster; Xref=ChEBI:CHEBI:21143; Evidence={ECO:0000250};
CC Note=Binds 1 [8Fe-7S] cluster per heterodimer. {ECO:0000250};
CC -!- SUBUNIT: Tetramer of two alpha and two beta chains. Forms complex with
CC the iron protein (nitrogenase component 2).
CC -!- MISCELLANEOUS: Cys-194 is present instead of the usual Ser that serves
CC as a ligand for the 8Fe-7S cluster in the oxidized state.
CC -!- SIMILARITY: Belongs to the NifD/NifK/NifE/NifN family. {ECO:0000305}.
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DR EMBL; L35557; AAB53116.1; -; Genomic_DNA.
DR EMBL; L41344; AAA96264.1; -; Genomic_DNA.
DR AlphaFoldDB; Q57118; -.
DR SMR; Q57118; -.
DR GO; GO:0016612; C:molybdenum-iron nitrogenase complex; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0018697; F:carbonyl sulfide nitrogenase activity; IEA:UniProtKB-EC.
DR GO; GO:0051536; F:iron-sulfur cluster binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0016163; F:nitrogenase activity; IEA:UniProtKB-EC.
DR GO; GO:0009399; P:nitrogen fixation; IEA:UniProtKB-KW.
DR InterPro; IPR000510; Nase/OxRdtase_comp1.
DR InterPro; IPR000318; Nase_comp1_CS.
DR InterPro; IPR005976; Nase_Mo-Fe_CF_bsu.
DR InterPro; IPR024564; Nase_Mo-Fe_CF_bsu_N.
DR Pfam; PF11844; DUF3364; 1.
DR Pfam; PF00148; Oxidored_nitro; 1.
DR TIGRFAMs; TIGR01286; nifK; 1.
DR PROSITE; PS00699; NITROGENASE_1_1; 1.
PE 3: Inferred from homology;
KW ATP-binding; Iron; Iron-sulfur; Metal-binding; Nitrogen fixation;
KW Nucleotide-binding; Oxidoreductase.
FT CHAIN 1..528
FT /note="Nitrogenase molybdenum-iron protein beta chain"
FT /id="PRO_0000153099"
FT BINDING 76
FT /ligand="[8Fe-7S] cluster"
FT /ligand_id="ChEBI:CHEBI:21143"
FT /ligand_note="ligand shared with alpha chain"
FT /evidence="ECO:0000250"
FT BINDING 101
FT /ligand="[8Fe-7S] cluster"
FT /ligand_id="ChEBI:CHEBI:21143"
FT /ligand_note="ligand shared with alpha chain"
FT /evidence="ECO:0000250"
FT BINDING 159
FT /ligand="[8Fe-7S] cluster"
FT /ligand_id="ChEBI:CHEBI:21143"
FT /ligand_note="ligand shared with alpha chain"
FT /evidence="ECO:0000250"
FT BINDING 194
FT /ligand="[8Fe-7S] cluster"
FT /ligand_id="ChEBI:CHEBI:21143"
FT /ligand_note="ligand shared with alpha chain"
FT /evidence="ECO:0000250"
SQ SEQUENCE 528 AA; 58525 MW; 9BCAF68E99889DD2 CRC64;
MTTTPEHTSA VPLRVLDHND IFRDEVYQKQ FEGKREFENA APKEEVQRVL DWTRGWEYRE
KNFAREALTV NPAKACQPLG AVLAALGFEG TMPLVHGSQG CVAYFRSHFA RHFKEPVPAA
STSMTEDAAV FGGINNLVEA MENITALYKP KHIAVSTTCM AEVIGEDLFA YIGAAREQEA
ITQDFPVSYA HTPCFVGSHI TGYDVMLKGI LEMLAKSPDA DASKVAKSDK VRLNVIPGFD
TYIGNHREYK RILELMGVDP LILGDHSSSL DSPADGEYDL YPGGTPLAEG ALAKFSRASL
VLQESTLRRT AEYIEKDWKQ ETVLLETPLG VKGTDAFLTA VAKVAEVEVP AELTAERGRL
VDAITDSHAY VHGKRVAIAG DPDLVIALTR FVLELGMIPV HIVSTNADTT FKARMEKVLS
ASKFGEEATV WPEKDLWHLR SLVFTEPVDL LIGSMQLKYI SREANVPLVR VGFPIFDRHH
LHRFPIIGYT GGLHLLTQLV NTILDEMDRN DPDHSFELRR RSLIGAAL