NIP7_XENTR
ID NIP7_XENTR Reviewed; 180 AA.
AC A4QND5;
DT 16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
DT 15-MAY-2007, sequence version 1.
DT 03-AUG-2022, entry version 76.
DE RecName: Full=60S ribosome subunit biogenesis protein NIP7 homolog;
GN Name=nip7;
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Required for proper 34S pre-rRNA processing and 60S ribosome
CC subunit assembly. {ECO:0000250}.
CC -!- SUBUNIT: Monomer. Interacts with pre-ribosome complex. May bind to RNA.
CC Interacts with NOL8. Interacts with FTSJ3 (By similarity).
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the NIP7 family. {ECO:0000305}.
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DR EMBL; BC135468; AAI35469.1; -; mRNA.
DR RefSeq; NP_001096512.1; NM_001103042.1.
DR AlphaFoldDB; A4QND5; -.
DR SMR; A4QND5; -.
DR STRING; 8364.ENSXETP00000038700; -.
DR PaxDb; A4QND5; -.
DR DNASU; 100125143; -.
DR GeneID; 100125143; -.
DR KEGG; xtr:100125143; -.
DR CTD; 51388; -.
DR Xenbase; XB-GENE-1005412; nip7.
DR eggNOG; KOG3492; Eukaryota.
DR HOGENOM; CLU_097217_0_0_1; -.
DR InParanoid; A4QND5; -.
DR OMA; FLCGNHV; -.
DR OrthoDB; 1405073at2759; -.
DR PhylomeDB; A4QND5; -.
DR TreeFam; TF300081; -.
DR Proteomes; UP000008143; Chromosome 4.
DR Proteomes; UP000790000; Unplaced.
DR GO; GO:0005730; C:nucleolus; IBA:GO_Central.
DR GO; GO:0005654; C:nucleoplasm; IEA:UniProt.
DR GO; GO:0030687; C:preribosome, large subunit precursor; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0042273; P:ribosomal large subunit biogenesis; IBA:GO_Central.
DR GO; GO:0042255; P:ribosome assembly; IEA:InterPro.
DR Gene3D; 2.30.130.10; -; 1.
DR InterPro; IPR002478; PUA.
DR InterPro; IPR015947; PUA-like_sf.
DR InterPro; IPR036974; PUA_sf.
DR InterPro; IPR016686; Ribosomal_synth_fac_NIP7.
DR InterPro; IPR040598; UPF0113_N.
DR InterPro; IPR005155; UPF0113_PUA.
DR Pfam; PF03657; UPF0113; 1.
DR Pfam; PF17833; UPF0113_N; 1.
DR PIRSF; PIRSF017190; Rbsml_synth_fac_NIP7; 1.
DR SMART; SM00359; PUA; 1.
DR SUPFAM; SSF88697; SSF88697; 1.
DR PROSITE; PS50890; PUA; 1.
PE 2: Evidence at transcript level;
KW Nucleus; Reference proteome; Ribosome biogenesis; RNA-binding.
FT CHAIN 1..180
FT /note="60S ribosome subunit biogenesis protein NIP7
FT homolog"
FT /id="PRO_0000355570"
FT DOMAIN 94..170
FT /note="PUA"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00161"
FT REGION 1..92
FT /note="N-terminal domain"
FT /evidence="ECO:0000250"
FT REGION 93..180
FT /note="C-terminal domain"
FT /evidence="ECO:0000250"
SQ SEQUENCE 180 AA; 20532 MW; 2CD11D5321B5759E CRC64;
MRPLTDEETK AMFEKLSKYI GENIKLLVDR PDGTYCFRLH NDRVYYVSER ILKLATNIAR
DKLVSLGTCF GKFTKTHKFR LHVTALDYLA PYAKYKVWVK PGAEQSFLYG NHVLKSGLGR
ITENTSQYQG VVVYSMADIP LGFGVAAKST QECRKLDPMA IVVFHQADVG EYIRHEDTLT