NLP2_ARATH
ID NLP2_ARATH Reviewed; 963 AA.
AC Q7X9B9; F4JMB1; O65500;
DT 30-NOV-2010, integrated into UniProtKB/Swiss-Prot.
DT 25-JAN-2012, sequence version 3.
DT 03-AUG-2022, entry version 87.
DE RecName: Full=Protein NLP2;
DE Short=AtNLP2;
DE AltName: Full=NIN-like protein 2;
DE AltName: Full=Nodule inception protein-like protein 2;
GN Name=NLP2; OrderedLocusNames=At4g35270; ORFNames=F23E12.170;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617198; DOI=10.1038/47134;
RA Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T.,
RA Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B.,
RA Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M.,
RA de Simone V., Obermaier B., Mache R., Mueller M., Kreis M., Delseny M.,
RA Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D.,
RA Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J.,
RA Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B.,
RA Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J.,
RA Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R.,
RA Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M.,
RA Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S.,
RA Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C.,
RA Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J.,
RA Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S.,
RA Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A.,
RA Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M.,
RA Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D.,
RA Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E.,
RA Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S.,
RA Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R.,
RA Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M.,
RA Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E.,
RA Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P.,
RA Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K.,
RA Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K.,
RA de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K.,
RA Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M.,
RA Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G.,
RA Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K.,
RA Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K.,
RA Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W.,
RA Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H.,
RA Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B.,
RA Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J.,
RA Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K.,
RA O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N.,
RA Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A.,
RA Martienssen R., McCombie W.R.;
RT "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.";
RL Nature 402:769-777(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [MRNA] OF 573-861, GENE FAMILY, AND NOMENCLATURE.
RC TISSUE=Root nodule;
RX PubMed=15785851; DOI=10.1007/s00239-004-0144-2;
RA Schauser L., Wieloch W., Stougaard J.;
RT "Evolution of NIN-like proteins in Arabidopsis, rice, and Lotus
RT japonicus.";
RL J. Mol. Evol. 60:229-237(2005).
CC -!- FUNCTION: Probable transcription factor. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00852}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAA18742.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=CAB80244.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AL022604; CAA18742.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AL161587; CAB80244.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002687; AEE86488.1; -; Genomic_DNA.
DR EMBL; CP002687; ANM66175.1; -; Genomic_DNA.
DR EMBL; CP002687; ANM66176.1; -; Genomic_DNA.
DR EMBL; CP002687; ANM66177.1; -; Genomic_DNA.
DR EMBL; AJ579912; CAE30326.1; -; mRNA.
DR PIR; T06130; T06130.
DR RefSeq; NP_001320140.1; NM_001342332.1.
DR RefSeq; NP_001328087.1; NM_001342333.1.
DR RefSeq; NP_001328088.1; NM_001342334.1.
DR RefSeq; NP_195253.4; NM_119693.5.
DR AlphaFoldDB; Q7X9B9; -.
DR SMR; Q7X9B9; -.
DR PaxDb; Q7X9B9; -.
DR PRIDE; Q7X9B9; -.
DR ProteomicsDB; 251175; -.
DR EnsemblPlants; AT4G35270.1; AT4G35270.1; AT4G35270.
DR EnsemblPlants; AT4G35270.2; AT4G35270.2; AT4G35270.
DR EnsemblPlants; AT4G35270.3; AT4G35270.3; AT4G35270.
DR EnsemblPlants; AT4G35270.4; AT4G35270.4; AT4G35270.
DR GeneID; 829680; -.
DR Gramene; AT4G35270.1; AT4G35270.1; AT4G35270.
DR Gramene; AT4G35270.2; AT4G35270.2; AT4G35270.
DR Gramene; AT4G35270.3; AT4G35270.3; AT4G35270.
DR Gramene; AT4G35270.4; AT4G35270.4; AT4G35270.
DR KEGG; ath:AT4G35270; -.
DR Araport; AT4G35270; -.
DR TAIR; locus:2122108; AT4G35270.
DR eggNOG; ENOG502QQ6H; Eukaryota.
DR HOGENOM; CLU_008971_0_0_1; -.
DR InParanoid; Q7X9B9; -.
DR OMA; FLIQIWV; -.
DR OrthoDB; 1337805at2759; -.
DR PRO; PR:Q7X9B9; -.
DR Proteomes; UP000006548; Chromosome 4.
DR ExpressionAtlas; Q7X9B9; baseline and differential.
DR Genevisible; Q7X9B9; AT.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; TAS:TAIR.
DR CDD; cd06407; PB1_NLP; 1.
DR InterPro; IPR045012; NLP.
DR InterPro; IPR000270; PB1_dom.
DR InterPro; IPR034891; PB1_NLP.
DR InterPro; IPR003035; RWP-RK_dom.
DR PANTHER; PTHR32002; PTHR32002; 1.
DR Pfam; PF00564; PB1; 1.
DR Pfam; PF02042; RWP-RK; 1.
DR SMART; SM00666; PB1; 1.
DR PROSITE; PS51745; PB1; 1.
DR PROSITE; PS51519; RWP_RK; 1.
PE 2: Evidence at transcript level;
KW DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..963
FT /note="Protein NLP2"
FT /id="PRO_0000401487"
FT DOMAIN 635..716
FT /note="RWP-RK"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00852"
FT DOMAIN 862..945
FT /note="PB1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01081"
FT REGION 734..794
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 963 AA; 107279 MW; EAC2BF459B0C83FC CRC64;
MEGGRGGGDG NFLPNSNFGV FSDSAMDMDF MDELLFDGCW LETTDGKSLK QTMGQQVSDS
TTMNDNNNNS YLYGYQYAEN LSQDHISNEE TGRKFPPIPP GFLKIEDLSN QVPFDQSAVM
SSAQAEKFLL EESEGGRRYW IAPRTSQGPS SSVKERLVQA IEGLNEEVQD KDFLIQIWLP
IQQEGKNFLT TSEQPHFFNP KYSSLKRYRD VSVAYNFLAD EDSKESVGLP GRVFLKKLPE
WTPDVRFFRS EEYPRIKEAE QCDVRGSLAL PVFERGSGTC LGVVEIVTTT QKMNYRPELD
NICKALESVN LRSSRSLNPP SREFLQVYNE FYYAALPEVS EFLTLVCRVY DLPLALTWAP
CARQGKVGSR HSDENFSECV STVDDACIVP DHQSRHFLEA CSEHHLLQGE GIVGKAFNAT
KLFFVPEVTT FSKTNYPLAH HAKISGLHAA LAVPLKNKFN SSVEFVLEFF FPKACLDTEA
QQDMLKSLSA TLQQDFRSLN LFIDKELELE VVFPVREEVV FAENPLINAG TGEDMKPLPL
EEISQEDSSW ISHMIKANEK GKGVSLSWEY QKEEPKEEFM LTSGWDNNQI GSGHNNFLSE
AEQFQKVTNS GLRIDMDPSF ESASFGVGQT LLGSRRPGEK RRTKTEKTIG LEVLRQYFAG
SLKDAAKSIG VCPTTLKRIC RQHGITRWPS RKIKKVGHSL KKLQLVIDSV QGVQGSIQLD
SFYTSFPELS SPHMSGTGTS FKNPNAQTEN GVSAQGTAAA PKSPPSSSCS HSSGSSTCCS
TGANQSTNTG TTSNTVTTLM AENASAILKR ARSEVRLHTM NQDETKSLSR TLSHKTFSEH
PLFENPPRLP ENSSRKLKAG GASKVKATFG EAKVRFTLLP TWGFRELQHE IARRFNIDNI
APFDLKYLDD DKEWVLLTCE ADLEECIDIY RSSQSRTIKI SVHEASQVKL GGSFGSIGLG
PSL
